Apln018223.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Arctia plantaginis
Gene Symbol
-
Assembly
None
Location
CADEBC010000958.1:631286-640863[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 42 0.00094 0.058 13.9 0.5 1 23 101 123 101 124 0.96
2 42 0.042 2.6 8.7 1.6 1 23 194 216 194 216 0.99
3 42 6.2e-05 0.0038 17.6 0.5 1 23 220 242 220 242 0.98
4 42 0.44 27 5.5 0.6 1 23 276 299 276 299 0.90
5 42 0.0027 0.17 12.5 1.0 1 23 306 329 306 329 0.96
6 42 0.003 0.19 12.3 0.1 1 23 386 408 386 408 0.97
7 42 1 64 4.3 0.5 3 23 437 458 435 458 0.91
8 42 7.3e-05 0.0045 17.4 4.4 1 23 506 528 506 528 0.97
9 42 0.016 1 10.0 0.2 2 23 563 585 563 585 0.95
10 42 4.2 2.6e+02 2.4 0.9 1 21 591 611 591 614 0.69
11 42 0.12 7.1 7.3 0.1 1 23 659 681 659 681 0.93
12 42 0.0047 0.29 11.7 1.5 1 23 749 771 749 771 0.98
13 42 0.0021 0.13 12.8 0.6 3 23 777 797 775 797 0.95
14 42 0.033 2 9.1 0.4 1 23 805 828 805 828 0.92
15 42 0.098 6 7.6 3.0 1 23 834 857 834 857 0.95
16 42 0.15 9 7.0 0.9 1 23 863 886 863 886 0.96
17 42 4.8e-05 0.003 18.0 0.2 1 23 892 914 892 914 0.97
18 42 1.4 89 3.9 0.0 3 23 1027 1048 1025 1048 0.94
19 42 0.022 1.4 9.6 3.9 1 23 1070 1092 1070 1092 0.96
20 42 0.0001 0.0063 16.9 0.7 1 23 1096 1118 1096 1118 0.98
21 42 0.75 46 4.8 0.3 1 23 1123 1146 1123 1146 0.92
22 42 0.00016 0.01 16.3 2.1 1 23 1152 1175 1152 1175 0.98
23 42 0.063 3.9 8.2 1.3 1 23 1182 1205 1182 1205 0.95
24 42 0.001 0.063 13.8 1.2 1 23 1211 1233 1211 1233 0.95
25 42 0.001 0.063 13.8 0.7 1 23 1293 1315 1293 1315 0.94
26 42 0.24 15 6.3 0.5 1 23 1388 1410 1388 1410 0.98
27 42 0.0024 0.15 12.6 0.2 1 23 1414 1436 1414 1436 0.95
28 42 0.039 2.4 8.8 0.4 1 23 1441 1464 1441 1464 0.91
29 42 0.0017 0.1 13.1 2.5 1 23 1470 1493 1470 1493 0.96
30 42 8.7e-05 0.0054 17.2 0.2 1 23 1500 1523 1500 1523 0.98
31 42 4.3e-05 0.0026 18.1 0.9 1 23 1529 1551 1529 1551 0.96
32 42 4.4e-06 0.00027 21.3 2.7 1 23 1557 1579 1557 1579 0.99
33 42 0.0021 0.13 12.8 6.7 1 23 1585 1607 1585 1608 0.95
34 42 0.032 2 9.1 1.7 1 23 1720 1743 1720 1743 0.97
35 42 1 62 4.4 0.5 2 23 1768 1790 1767 1790 0.93
36 42 0.59 36 5.1 0.0 1 23 1814 1836 1814 1836 0.95
37 42 0.00072 0.045 14.3 0.2 1 23 1840 1862 1840 1862 0.98
38 42 0.00019 0.012 16.1 0.4 1 23 1867 1890 1867 1890 0.96
39 42 0.0079 0.49 11.0 0.3 2 23 1897 1919 1897 1919 0.93
40 42 0.13 8 7.2 6.4 1 23 1926 1949 1926 1949 0.96
41 42 6.5e-05 0.004 17.6 2.7 2 23 1956 1977 1955 1977 0.96
42 42 0.00033 0.021 15.3 1.6 1 23 1983 2005 1983 2005 0.98

Sequence Information

Coding Sequence
ATGCGAAATGAGGAAACCAAAAAATCTATTTCATTCACCCGGGATATATCACCCAAACATAGTGGAATGAAGCTCAAAAATTATTCAGGTTCCGCTAATGTATCGGAGGGGATAGGCGTTAAACGCGTTAGGAAGTTAAAGGAGAACGTTAGTGCACGTCAGCTGCGCAGGCGCCGAAGAGCTAACAACGAGCTCCCTGAAGAATCAGAGAAAAGAATTTCTAAGACTATGATGCGGAGAAATGCTCTGATCCTTCTGGAATTTTCAACCGCTTGGGCTTTCAGATGGTTCCATAGCGCGTTTTATTGTGCCTACTGTGATGTTAAATTCGTCGATGTACCGCTTTTAAGAGCACATGTTAAGACTCACCACCTGCACGAAATACCGACTAAGAGAATTTTCTCGAagttaacagaaaataatatggTTAAAGTAGATATTGCGGAATTAGGTTGTAGATTATGTAGCAGACTTTTAAATGGTATTGATTCCTTGAAGGACCACTTACTCATACATGGTAAAACCTTAAACGTCAATTACAGTGACGGTGTACTACCATTCAAATTGGATGATGAAGGATATACTTGCCAAATTTGCTTTGATCAGTTCATTAGTTTCTCCAAAATGAACGAACACATGAACACGCATTACCAAAATTACGTTTGTGACTCTTGTGGTAAAGCTTTCGTTTCAAAACCTCGATTCAGGAAACACATCCAATCTCACGAAAAAGGAAATTTTCCTTGTGGGGATTGCGATGAGATTCTAGAGACTAGAGCCGCTAGAATGTGTCATAGAATGAGGGTACATAGAAAAGGCGTGCGTTATGCATGTCCGAGGTGTCCGGATGTCTTCACAACGTACCACAGTAGAGCCAGACATTTAGTAGAAAGACATGGGCTACAAAAGAAGGAATATTACTGTAATGCTTGTGATAAATCTTTTGAAACCAGCTCGAAACGCGCCAGCCATGTACGTTTAACACACGCTAATGCTGAGAAACGACATTACTgggCCAGCAAGGACGATATGAAAACAAAACCTCCAACTACAGTAGTTTGGAAGAAAAAACGAAGAATTGTTGAAGATAAAAAGAATGCGGCTCTCATTATAACCCATTCAAATGCAGTTGTATTTAGATTTCAAAGAGGCAAATTCATGTGTGCTTATTGCCCAGAAATATTTACCACAATAATAGAGCTAAGAATGCATTCAAGGATTCATGAGAACGATAAAATGCAGATCTTTGAGGAAAAACCTTCTGTTAGGAACCACTTCCCTCTTAGAATTGATATAACCGACTTAGCGTGTAGTATATGCGGACAAACTACTTTAAAATTTGACGACTTTAAAAAGCATTTATTGGAAAAACACTTCAAAAGTATGAATCCCGAATATTCTGATGGAGTTATACCTTATAATTTAACTGGTAAAGAGTACAGATGTGTCCATTGCGACTTACTTTGCGAGagttttatgataatatttgcTCATATGAACGACCATTATCAACATCATGTATGTCCTACATGCGGCAAAGGTTTTTCTAACCACCACAAACTTAGAGGCCACCTAAGAATTCATGAGTCCGGGCAATTTCATTGTCCAAAATGCGAATCCATTTTCTTAACGCGTGCTGCCAAAAATAGCCATGTCTCTATCGCGCACGGAAGGAAAGACCGAAATAGATGTCCAATTTGTAATGAACGATTTGATTCGTACTATGCTAGAGTGAGACACCTAGACAGAGTTCACGGTCAAAAAGTGGAATATAAGTGTAACTTGTGTCCTGCCGTATTTGGTTGTGCAAATTTAAGGTATACTCATATACAGAGAGTGCATTTGAAAAAGAGAAggaCCGTCGAACCCAAAGTAAAATGGCGGCCGAAGCGCAAGTTTAACGATCAGAGAGATAACGCAGCAATCATACTTGAGTATTCCAACGCTTGTCCGTTTCGATGGAAGAGGGGGGCGTTCACTTGCGCCTACTGTCCCCTCTCCTTTGGAGATTTCAGTGGTATCCGAGACCACGTTATCGATCATCCCAATAGAGTTGAAGCAATGCGACTTGCTCGTACATTCGCTAATCTTAAAGTTGAAATCACGAACCTACAATGCGTACTATGCCTTAAACCTATGGACAACTTAGATGCTCTTATCGACCATTTAATATCTATCCacaataaatctataaataaagaTCTAGGATTAGGCACTACTCCTTTTCTATTATCCGGCAAGGAATACAATTGTACTCTTTGTGATGAAAGTTTCGAACTCTTCACAAAACTCAATACCCATTTGAATAAACATTATCCTAATAGTATATGTTTCTTGTGTGGCAAAGCGTTTTCTACTGTTCATAGATTGAAAGCTCATCTCGTTATTCACGAATCAGGCGAGACAGAACAATATAAATGCACTAGATGTACGGAAATGTTCGCCACTAAAGCGTTAAGGAATAGCCACGTCGTTTCTGCTCATGGCAAAGAGTACAGATATAGATGCCCCTATTGTAAcgattgttttaaaaactatggAGATAGGGGCAAGCATTTGAAAGAATCTCACGGAAAGAACATCGAGTATCCATGTAACTTGTGCTCAGCAGTTTTCGCTATGTGCAATCAAAGGACTAAACATATTCAGCAAGTTCATATTCGCCATAAGACTTTCTCTTGTGATATTTGCCCTTACAAGTTTGTTACTGCAGCGCAATTGAGAAATCATTTAGTTAAACACGGTGgaAGAAAAACTGTAACGGAGAGACCAAAAGAAACTTTGATAAAGCAGGAAGTGGAATCTGATACGGAAAATAACAGGGATTTGATGACATCCGCGAGAGCCGGCTACGAGAGACGGGCCATCTTCAGAAATAATATTGCTATCATCATGGAATCATGTACGGCGTACCCTTTCAAGTACAGGAAAGGAACGTACTTGTGCTTCTTTTGTAAAAGTACATTTCTCGAGCCTGAGAAGTTAAGAGAGCACAATCATATACATCATTCAGAAGTTAAACAACTCCTTAAACCGAGAAAGTACGAACCACTAAAAATGGACTTCGCAACAACCAtttgtaaaatgtgtaatattgaaattgaagATTACGCGATGTTAAAGATCCATCTCACTGTGGAACATTCCAAAATTATAGACTGCACCTATGGAGACAGTGTTTTGCCTTACAAATTAAGTAAAGAAGAACACAACTGTCAGATATGTGGAAAGACGTACGAAATGTTTCTAAGTTTGCACAAACATATGAACGATCATTACGAGCATTTCATATGTGAGAAATGCGGGAAACGTTTCGCTACGTCACAAAGAATGATAAACCACGCTAGGACACATGAACGGGGGGATTTTCCATGCAAGAGATGTTCAGATACCTTCCCTTCATACGCCTCTCTGTACGCCCACAACGCTAAAGTCCACCGATCGAACAAAAGATACAAATGTCCTATATGCGATGAGAAATTTGCTTCCTACAAACATAgacttaaacatttaaatacaattcaCGGAGAAAAGACTGCGGTCTTTCCCTGTCCGTCTTGTCCTAAAGTTTTTGATCTGTGCAGCCGAAGAACAGCCCATATACGGTTTCAACATCTGCAAGAAAGGAACCATATTTGTTCTATCTGTGGGATAAAATTCTTTACGAATTACGAGCTGCAGGAACATTCTATAAAGCATGgTGACGATCCCTCACCTGACAAGAATATTGCTAAAGAAAATAATGGTGAAACATCGGCCCAGTTTGCAGAAAGAACGAAAAATTTTACAGACGACGATATTAAAGCTAGGAAACGCCACGCGATTTTACTTTTAGAATCTTCTAACATCTGCCCATTTAGGTGGATGAAAAATCTATACATTTGCTTTTACTGTGACCAGCAATTCTCAGATCCTATAAAGCTCAGGCGCCATAACTTAGAACATTCCTTACTGAAAAGCTATCAAATAAAACACGCGATGTCAAAATTGAGGAAATACGAATTAGTGAAGATAGACGTAACTGATGTCAGCTGTAAGCTGTGTGAAGATCAAATTCTTGATTTCAATTCTTTAAAGTGGCATTTACTGGAAAAGCACAATAAGCAGTTAGACCCTAAATCTGCCGATGGAGTGTTGCCATTCAAAGTAACTACAGACGATTTCCAATGCGTGTTGTGTATAGAAAAATACTCggaatttaaattgttaaatcaACATATGAATGTacattttcaaaactttatatGCGAGCAATGCGGTACTGGGTTTGTTACGCCCGAACGGTTAAGAACTCACGCATTCTCACACGAGACGGGCTCGTTTCCTTGTGATAGCTGCGATAAAGTGTTTCGTTCTACTAACGCGAAGAATGAACATTTTGCAACAGTGCACATGAAAGTAAAACGCCATAGATGCCCTCAATGTCCCGAAACGTTTAGAAactattttcaaagaaataaacacatttCTTCCGTCCACGGTGTaaagttaaaagaatttaaatgcaCCATGTGCCCGAAAGTGTTCACATTGAGTGGAAAACTCGGTGTACATGTCAGGACAGTGCACCTGAAAATGAAGAGGCATGCCTGCGAAGTCTGCGAGTGGAAGTTTTATTCAAAGTCCGAGTTGAAGGAGCACATGATAAGACACAGTGGGGAAAGAAAGTTTCAATGCAGCGTTTGCAAGAAAGCGTATGCGAGGAAGCATACATTGAGAGAGCATATGAGGATACATGAAAATGATAGACGTTTCATATGTGCTACTTGCGGCACTTCGTTTGTACAGAAATGTAGCCTAAAACATCATACTAAGATCCACCATTCCAACTCAGGGCAAAGATCCGTCTCGCCCATACGTGACTCCAAGCGAAGAATCGTGCCGTTATTCCAAGTGTCTTACGACAGAAGCCTGTGTAAACCATTGGGCACCTTAGTGAACTTCAGTGCACTCAAAAAGACTATGACTAGACGTCATACTCCATCAAGAAGTCCTTCACCTGTAAATATATCAAGATCACCATCCCCGTTCATTGAGAGACCAGAATTAGTTGAAATTATCCAtcaaaaagctaaaaaaaatccGGATATAAGACAGAACGCTCTAGCTGTGTTCGAATATTCTACGGTATATCCGTTTGTGTATGggaataataaattcaaatgttttgtttgcTCGCAACCCTTTTTAGACCTACACTTGCTCAAGGAACATATGCGTGAAACACATAATTTTGCTCCGCTTAAAAGATTAGTTAATAACAGAAGGGAAAACGTTTTAAAAGTGGATGTCAGTGATATTACCTGTAAAATATGTTCGGCAAAACCATCCGACTTGGTCCAGTTAAAACATCATCTCAAAGAAGTTCACGACAAACCAATAAACTTAGATCTTCAAGACAATTTAATACCATTCAAATTGGAATTAGACAATGGGTCTTATAGGTGTGTCATTTGCCAGGAAATTTTCATCAAAGTAAGAATATTGGTCATCCATATGAGTATACactttaataattatagttgCGAAGTTTGCGGTTCTGCATTTATGACATTGCGGCTTTTGAAAAAGCATTTAGAAGTCCATGAAGCCGGCAACTACCCGTGTGACCGTTGTAACAAAGTTTTCAGCACTCCTTACAAAAGGACATTGCATATCCGAGGCGTGCATCTTAAGCAGTTCCCAAGAAGATGTCCGATATGTCCAGAAAGGTTCAACTCAAATTACAAAAGGACAATTCATTTGCAAGATGTCCACAACCAATCTACGAGAGTGCACAAGTGTGAGACTTGTGGGCGTGGTTTTAACTTGAAATACCATTTGATCTGTCATACCCGGTCTGTTCATTTACAGGAGAGAAATCAACAGTGCGAGGTTTGTCAGCAAAGGTTTTGTAATAAGGAATCTTTGAAGCGTCATATGGTAATACATACTGGTGAAAAGAATCATAAGTGTGAAGTCTGCGGGATGGCATTTTTGAGGAGGAAAAACTTGAAGGATCATTTGCGTTTGCATGatatagattaa
Protein Sequence
MRNEETKKSISFTRDISPKHSGMKLKNYSGSANVSEGIGVKRVRKLKENVSARQLRRRRRANNELPEESEKRISKTMMRRNALILLEFSTAWAFRWFHSAFYCAYCDVKFVDVPLLRAHVKTHHLHEIPTKRIFSKLTENNMVKVDIAELGCRLCSRLLNGIDSLKDHLLIHGKTLNVNYSDGVLPFKLDDEGYTCQICFDQFISFSKMNEHMNTHYQNYVCDSCGKAFVSKPRFRKHIQSHEKGNFPCGDCDEILETRAARMCHRMRVHRKGVRYACPRCPDVFTTYHSRARHLVERHGLQKKEYYCNACDKSFETSSKRASHVRLTHANAEKRHYWASKDDMKTKPPTTVVWKKKRRIVEDKKNAALIITHSNAVVFRFQRGKFMCAYCPEIFTTIIELRMHSRIHENDKMQIFEEKPSVRNHFPLRIDITDLACSICGQTTLKFDDFKKHLLEKHFKSMNPEYSDGVIPYNLTGKEYRCVHCDLLCESFMIIFAHMNDHYQHHVCPTCGKGFSNHHKLRGHLRIHESGQFHCPKCESIFLTRAAKNSHVSIAHGRKDRNRCPICNERFDSYYARVRHLDRVHGQKVEYKCNLCPAVFGCANLRYTHIQRVHLKKRRTVEPKVKWRPKRKFNDQRDNAAIILEYSNACPFRWKRGAFTCAYCPLSFGDFSGIRDHVIDHPNRVEAMRLARTFANLKVEITNLQCVLCLKPMDNLDALIDHLISIHNKSINKDLGLGTTPFLLSGKEYNCTLCDESFELFTKLNTHLNKHYPNSICFLCGKAFSTVHRLKAHLVIHESGETEQYKCTRCTEMFATKALRNSHVVSAHGKEYRYRCPYCNDCFKNYGDRGKHLKESHGKNIEYPCNLCSAVFAMCNQRTKHIQQVHIRHKTFSCDICPYKFVTAAQLRNHLVKHGGRKTVTERPKETLIKQEVESDTENNRDLMTSARAGYERRAIFRNNIAIIMESCTAYPFKYRKGTYLCFFCKSTFLEPEKLREHNHIHHSEVKQLLKPRKYEPLKMDFATTICKMCNIEIEDYAMLKIHLTVEHSKIIDCTYGDSVLPYKLSKEEHNCQICGKTYEMFLSLHKHMNDHYEHFICEKCGKRFATSQRMINHARTHERGDFPCKRCSDTFPSYASLYAHNAKVHRSNKRYKCPICDEKFASYKHRLKHLNTIHGEKTAVFPCPSCPKVFDLCSRRTAHIRFQHLQERNHICSICGIKFFTNYELQEHSIKHGDDPSPDKNIAKENNGETSAQFAERTKNFTDDDIKARKRHAILLLESSNICPFRWMKNLYICFYCDQQFSDPIKLRRHNLEHSLLKSYQIKHAMSKLRKYELVKIDVTDVSCKLCEDQILDFNSLKWHLLEKHNKQLDPKSADGVLPFKVTTDDFQCVLCIEKYSEFKLLNQHMNVHFQNFICEQCGTGFVTPERLRTHAFSHETGSFPCDSCDKVFRSTNAKNEHFATVHMKVKRHRCPQCPETFRNYFQRNKHISSVHGVKLKEFKCTMCPKVFTLSGKLGVHVRTVHLKMKRHACEVCEWKFYSKSELKEHMIRHSGERKFQCSVCKKAYARKHTLREHMRIHENDRRFICATCGTSFVQKCSLKHHTKIHHSNSGQRSVSPIRDSKRRIVPLFQVSYDRSLCKPLGTLVNFSALKKTMTRRHTPSRSPSPVNISRSPSPFIERPELVEIIHQKAKKNPDIRQNALAVFEYSTVYPFVYGNNKFKCFVCSQPFLDLHLLKEHMRETHNFAPLKRLVNNRRENVLKVDVSDITCKICSAKPSDLVQLKHHLKEVHDKPINLDLQDNLIPFKLELDNGSYRCVICQEIFIKVRILVIHMSIHFNNYSCEVCGSAFMTLRLLKKHLEVHEAGNYPCDRCNKVFSTPYKRTLHIRGVHLKQFPRRCPICPERFNSNYKRTIHLQDVHNQSTRVHKCETCGRGFNLKYHLICHTRSVHLQERNQQCEVCQQRFCNKESLKRHMVIHTGEKNHKCEVCGMAFLRRKNLKDHLRLHDID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-