Basic Information

Gene Symbol
Ncor1
Assembly
None
Location
CADEBC010000045.1:3034861-3102727[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-08 2.2e-05 24.5 0.0 1 43 449 491 449 493 0.97
2 2 1.2e-07 0.00013 22.1 0.0 5 46 872 912 872 912 0.96

Sequence Information

Coding Sequence
ATGGTGTGGTCCACGCAAACCGGGGAGGTGTTGATTGACATCATAACGAGGCCCGGGCAGACGGATCACGGGCACGGCGGCGGCGCGCTGGCGTACGGTGGCAAGCCAGCGGGGGCTGTGGTGGCGCCGCCGCAGCCCCGGCCGCCAGCCGCGCCCTATGCGCCCCAACCCTACGCTCCTGCACAGCTGCGTCTGCACCAACCTGGTTATGGATCTGCTGCATTATCATACAGGGACAGTAGTTACGTGCGCGGTGGCGGCGCCGTTGGAGGCGTGGGCGTCGGTGCGGTGGGCGCGGGTACAGCCGGCGAATACCGCGGTGGCGGCGCCCGCGTCTCACTGCTTGGCGGCGCATATCTACCGGCCCCCGCACCCGCCACACACCACCCGCCCCCCGCAGATCCACCTCCCTTCAAGAAGATACGGCTTACTGCGGATAGGACGCCGATGTCACACCACCAACCGCTTAGGGTTGATACTAGGGAGCCGGTGAACGCGTACAACACGGTTGAAGTCCTATCTCCAAACCCGCCTTCAGAACCGACCATCGAGGACCAGAATTTCAGAACTACTAAGGATgatttattacaacaaatatcCAAGGTGGACCGCGAAATGGCGTTATCAGAATCTACTCTCACAAACCTAAAGAAGAAACAAGAAGAACTTGAACAGACAGCGTCCAAGCCAGCCCGAGCTGAGGAACCCGAGGAGGTTACACCAAGGCATAGAAGCCTTGCGCAGTGCATCTATgctgaaaatagaaaaaagATCAGCATGGATAATAAGCGGCAAacggCAACGTCAGCGCACGCAATGTTATCACACCTGGGCCCGCCCGTGCTGTACCCATTGTACAATCAGCCACAAGACACAGAAATATATCATGAAAACATAAGGCGACATAGGACTTTTAGAAAAAGACTCTCCGAACACATCCGAAAGTTAAAACTTGTGGCAGAAAAGCGAGAGGATGCACTAGCAGAAGCGTACAGCAGAAGAGCAGCGGAGTGGTTAAAAAGAGTAGAACGGATAGAACAGGGACAGAAGAGAAAGGCTAAAGACGCAAGAAATAGAGAGTTTTTTGAAAAGGTGTTTCCAGAGCTGCGAAAACAGCGCGAAGAGCGAGAGCGATTTAACCGACTGGGCGCGCGAGTCAAGTCTGAGGCGGAGCTGGAGGAGATTGCCGACGGGCTGCACGAGCAGGAGCACGAGGACAAAAAGATGCGCTCGCTCACCGTCGTGCCGCCGCTATTGCGGGACCCCAACGACACCACGCCCGTATACGTCGATACCAACAGACGCTGTATGGACATGGAGGCAGAACACAAGGAGTTACAACTACGCAATGTGTGGTCGCAGGCGGAACGGGAACTCTTTCGCGAGAAATACCTACAACATCCCAAAAACTTCGGACAGATTGCTTCATTTCTACCTCGGAAAAGTGTTCGGGACTGTgttagATTTTATTACTTATCGAAAAAGGCCGAGAACTACAAGCAACTCCTCCGCAAACCTCGGCAGCGACGGTCAGCGAGAAATCCTCCGCGGACTCAGCAGGAGCCTGAACTGCCCGCGGGGGTCACTACGAGGTTGCAGCGGTCACAGGGTACCTCTGTACGATCGGAGAACAAGGAACCGAACATGGAGGATGGTGGTCTCAACATGCCTCCAGGGGCTGACGGGGTTGCGGTACCATGTATACCTATACCATCTGCAGGGCCTGCTCATCCACAAACATCGGAGTTAATACGAACGCCTCCTCTTCCACCATCGCCACCACCGGCGTCATCAGCACCGCCAGCGCCCGTAGCGGTAGCGGGGACACCGATGAGTGTTGCAAGTCCTACAGCCACGCCAACGCCGCCTACTTCAGAAGTTCCCCTACCACCAGTGACCTCGCAGGAGGTTACACTCGTCACCATCACCCCTGTTATGACATCGTCACCAGCGCCAGCACAAACATCGGCACAGACGACGTCAACCTGCCTAACAACAACAGCTCCTACGATAGTGGTCGTAGCTGGCTCGCCGGCGTCAACACTAACGGTCCCCGCGATTTCCAACATCTCAAATGTGTCAAGTTTGTCCATCGTATCTACGGGAGGAAGTGCGTCGCCTACACCGCAACCAGCTCAGCCGCCCACGCCAACGCAGCCACCGCCCACACCCGAGACCGCCGTAACAGAACGCATCGGAACACCATCCTTGAGTACAACGATCACTACGACCACGGTAACGGTAACTACATCGTCGAACTGTGCCGTCTGTAGCATAGCTGGCGCGACGAGAACTGTTTCGAGGTCAAGAGCTATTCATTACGGTCTCAAAGAAGACGCTGTAGGGGCAAGGGTATGTGAGCCGTGCCACTGTAGATGTGTGAGATCTCGGTACACCAGGTGTCCGGTCCCCACGTGTCCGGGGCCAAGGGTTCGAGCGAAACGGTTAAGACACTTACCGCCTAGATGGCATGACTTATCGCTGGAACTGAAGAGGCCTCTTATGGACGAGTTTGAAATCCCTAGCGATCTAAGCAAGTGTTGTCTAGcttgttttaaaagaataacaCGGAGGTTAGAGACAGTGGTGGAAGGTGGCTCATCACCGGAACCTACGGAGGAGGAAGCCGCGAGGTTTAGGTCCTTGCTGAGAGATCACGGGACTGCGTGGGATAGAATTGCGACTATTAGTGGGCGAACACCCGCTAGCTTGAAGGCGTTTTATTTCACCTACAGAAAAAAGCTGCAACTAGATACTTTGGTTGGTGATCGGCCAGCGTCCGTTCCTCGACTAAGTTCTAGCGAAGATAGTGCGTTAAGTTCGGCTGACACTGACACGGCTAGTGGAGGCTCTCCGGCTACTCCCAATGCTGCCGCGACGGCTCCTGCACCTGCCCCTAGAACGGATGCTGTAGCACCTAGAAGACCTAGAAGAGAAGAGTATGACTCATCAGCCACAGAAACGGCCGATGAAGAGAATGATGCACCTAGCGCTAAGATCATACCTCCAACATCAGTGCCAACCATAGTGTGCAGTGGGTCGTCGTGCAGCCCCGTGGTGTGCGTGTCTGCGGTGGCGAGTGCTGTGGGAGCGGGCGGCGCGGGCAGTGCGGGCCCGCCGCCCAGCGCCACGCCGCCCAGCTCCCGCCCCGTCAACGCCCCACAGACAGTTCGAGATGTGGTGCTCAACCTCATCGAGATCAGTCTCACTAGGGACTCGCAGCCGCAGCATTCCAATATGAAGCCGCATCAATTAAAGTTGCCGTCGTCTTGCGCCAGCGGACGAGAGAGCCTAGCGACACTAAGCGTGGTGAACAGCTCGCACGTGGGCGGGCCGGCCGGCGCAGCCAGCCCGCAGCGCGCGGCCACCATCACGCCGCTGGCGCACGCCGCGCCCACGCCGCCCGCACAGAACTGCGACGGCAAGGACGTCATGGTGCTGCAGATAGAGCCCAGGCCCGACCGCCCGGAGAGAACCGACAGACCCGACACGAGACACGAGCCGCTCCTAGATCTTAGCGTGAAGAGGCCGCGGCACGATCAGCCGTTCCCGCATCCTAATAAATCGGTGTACAGAAACTCGACCGACTATCAATCGTATCGACCGCAGCCCGAAAGGGAATCACCCAACCAGTATAATTCCAAACCCAAGCCTGTGACGCAACCGTCGCGTCCTCCCTTAAAACAGGCCCAAAATAAGGGTTCCATAACTTTAGGGACTCCAGTCGAAACGAGATTTGAAACCTTAAGAAATCCTCCCGAGCAGAAGACGGGATCGATAACGGCGGGCACCCCTGTGCACGGGACTCATCATCTTGCGGATAAGAGAGCGATGGATTTCTATAACAAGAGAAGAAGTCCTGGAGGAGCGTATTACTCGACCAACCAGCCTCGGCCGCAGTCGCCGTCTTTTTCACCTACCGGGAGCTCAGGGTACACGCGCAACCCGTACGGCGGGTTGGAGCAGCGCCAAATCATCATGGCGGACTTCATCACGTCGCAACAGATGGGCCACGGCGGCGCGCGTCGCGAGCGCGAGCGCGCCGCCTCGCCGCAGTTCCGCCGCGACAACGTGTCCGTCATACAGCGCCACACGCCGCAGCTCTACCCGCACCCGCCTCCAGGTCATGAAGCCTTCACTTCATTAGTAGACGTGGCGTCGGCGGCGACCGCTCTCCCGGTGCCGAGGGGCTCCGCTCCCGACCAGAAGCCCGAGCCCAAGCCTCAGCAACAACAGCACCATGGGCAACCTCACGACATcagaatAGCGATGGCGCAAAAGCTGCCACAGTTCCAACAACTACAACAGTTTCCGATGATGGATAGAAGAGTACAATCTCAACAACAGTACATGGAGAGAGATagacaaatacacatacaaagGAGAGAATCCGCTATACAAGCTATGCAGGACCGCCACGCCATGGAACAGCATCAGTCACAACAACCGCCGCAACACCAGCCCCCCATCATACATGACCGACATCATATGCACCCATGTAGCGTATCGTCTCAGGATGGTGACCGACGCATGATGCAATCTGTTACTTACACAACGCCTACGAAGCCCCGGGCACAGACACCACACGCGAGGGATCAATACATAGATAAAACTAGTCGAGTGGTGGTGTCGTCGGTGCCGGTGACGGGCGCGGCGGCGGGCGCGGCGAGCGTGGCGGTGGCGGGCGCGGGCGCGGCCGCGGCGGCAGCGGGCGACGGCCGCGCGCGCCCTGCCGAGGGAACCCTAACTGCAGCTTCTCTCATTGACGCTATCATCACACATCAGATCAGCCAAAGTTCCGATCAACGATACCCGGAGCGGGGCGAGCAGGCGGGTGCAGCGGGCGGCATGAGTGGCGCGGGTGGCATGAGCGGCGCGGGTGGCATGAGCGGCGCGGGGGCGGTGGTGACGGCGGGGCGCGGGCCCACGCCTCAGGAGCGCGAGGACCACGCCGCACTCACCAGCATCAAATTGGGCGATCTCGCCTCCAACATCATCACCAGGGACTTCTGTAGTCCCACTACCTCCATGCTGCACCATAATAACAGGTTCACGGTACCGAGCTCGGAGGGTTACGCGAGCGGCAACAGCAGCACAACGAACGAGGAGTGGAAGAGACGAGACGCGCCCAAGCATGCGCCTTACCTGGAGCCCGTGTCGCCGCCCGACAACCACCCGGCCAACCGAAACAATACCAACCGGCGTTATAGTTGCGTGGGCGGCGGTGGAGTTCCTTCGAGTACCGGCGGGGTCGTGGGCGGTGCGGGCGGCGGAGTGCTGACGGCCTTCGATTACGTCACCAACCGCATCGTGGAGGTCATGCGCAGTGACGCAGACGAGCGCACCAAGCCCATCGCCTTCCCCACCACGCAGTACGCTTACCCGTATTCCGCGCTCAACGTCGCCACCAACAGCACGGACGGCGGCAGTACGGGGTCGCACGGGCCGGCCGGgcccgcgccgccgccgccgcccgaGCCGGCGCCGCTGATGTCGGCGCAGTACGAGCCGCTGTCGGACGAGGACTGA
Protein Sequence
MVWSTQTGEVLIDIITRPGQTDHGHGGGALAYGGKPAGAVVAPPQPRPPAAPYAPQPYAPAQLRLHQPGYGSAALSYRDSSYVRGGGAVGGVGVGAVGAGTAGEYRGGGARVSLLGGAYLPAPAPATHHPPPADPPPFKKIRLTADRTPMSHHQPLRVDTREPVNAYNTVEVLSPNPPSEPTIEDQNFRTTKDDLLQQISKVDREMALSESTLTNLKKKQEELEQTASKPARAEEPEEVTPRHRSLAQCIYAENRKKISMDNKRQTATSAHAMLSHLGPPVLYPLYNQPQDTEIYHENIRRHRTFRKRLSEHIRKLKLVAEKREDALAEAYSRRAAEWLKRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPNDTTPVYVDTNRRCMDMEAEHKELQLRNVWSQAERELFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRQRRSARNPPRTQQEPELPAGVTTRLQRSQGTSVRSENKEPNMEDGGLNMPPGADGVAVPCIPIPSAGPAHPQTSELIRTPPLPPSPPPASSAPPAPVAVAGTPMSVASPTATPTPPTSEVPLPPVTSQEVTLVTITPVMTSSPAPAQTSAQTTSTCLTTTAPTIVVVAGSPASTLTVPAISNISNVSSLSIVSTGGSASPTPQPAQPPTPTQPPPTPETAVTERIGTPSLSTTITTTTVTVTTSSNCAVCSIAGATRTVSRSRAIHYGLKEDAVGARVCEPCHCRCVRSRYTRCPVPTCPGPRVRAKRLRHLPPRWHDLSLELKRPLMDEFEIPSDLSKCCLACFKRITRRLETVVEGGSSPEPTEEEAARFRSLLRDHGTAWDRIATISGRTPASLKAFYFTYRKKLQLDTLVGDRPASVPRLSSSEDSALSSADTDTASGGSPATPNAAATAPAPAPRTDAVAPRRPRREEYDSSATETADEENDAPSAKIIPPTSVPTIVCSGSSCSPVVCVSAVASAVGAGGAGSAGPPPSATPPSSRPVNAPQTVRDVVLNLIEISLTRDSQPQHSNMKPHQLKLPSSCASGRESLATLSVVNSSHVGGPAGAASPQRAATITPLAHAAPTPPAQNCDGKDVMVLQIEPRPDRPERTDRPDTRHEPLLDLSVKRPRHDQPFPHPNKSVYRNSTDYQSYRPQPERESPNQYNSKPKPVTQPSRPPLKQAQNKGSITLGTPVETRFETLRNPPEQKTGSITAGTPVHGTHHLADKRAMDFYNKRRSPGGAYYSTNQPRPQSPSFSPTGSSGYTRNPYGGLEQRQIIMADFITSQQMGHGGARRERERAASPQFRRDNVSVIQRHTPQLYPHPPPGHEAFTSLVDVASAATALPVPRGSAPDQKPEPKPQQQQHHGQPHDIRIAMAQKLPQFQQLQQFPMMDRRVQSQQQYMERDRQIHIQRRESAIQAMQDRHAMEQHQSQQPPQHQPPIIHDRHHMHPCSVSSQDGDRRMMQSVTYTTPTKPRAQTPHARDQYIDKTSRVVVSSVPVTGAAAGAASVAVAGAGAAAAAAGDGRARPAEGTLTAASLIDAIITHQISQSSDQRYPERGEQAGAAGGMSGAGGMSGAGGMSGAGAVVTAGRGPTPQEREDHAALTSIKLGDLASNIITRDFCSPTTSMLHHNNRFTVPSSEGYASGNSSTTNEEWKRRDAPKHAPYLEPVSPPDNHPANRNNTNRRYSCVGGGGVPSSTGGVVGGAGGGVLTAFDYVTNRIVEVMRSDADERTKPIAFPTTQYAYPYSALNVATNSTDGGSTGSHGPAGPAPPPPPEPAPLMSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-