Apln013559.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- -
- Assembly
- None
- Location
- CADEBC010000558.1:100135-103019[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-08 5.2e-05 22.9 0.0 1 40 19 58 19 63 0.86 2 2 10 6.3e+03 -3.0 0.0 31 45 134 148 133 148 0.83
Sequence Information
- Coding Sequence
- atggtttatttaaatgacaggATGCCTGGGAAAAATGGCGCATTCCTAAATTATACTGAAGCTGCAATGCTTGCAGCAGTGAACGATGTTCATCTTCATAAAACACCAATACGAACGGCTGCAAAAAAGTTCGGTGTACCAAGAATAACGcttacaaataaagtaaaagggAAGTCACCGATGGAACGAAAAATGGATCCAACATCCATCCTTACACCAGAAGAGGAGCATAAAATATGCGACTGGGTGCAAAAAATGGCAAAAGCGGGTTTTCCTGAGACAACCGAACAGTTAATTGTGAGTGTAGAGAAATACTTAAAGGAACTAAAACGTCCATGTGTCTTATTCAAGCATGGAAGACCAGGTAGAACATGGGTAAAGGCATTTATTCGGAGAAATCCAACGATTTCCATGAGGATATCACAAAATTTGACAGCATCGAGAGCCAGGGTAACAGGTGCTCACCTATCAGAATGGTACAAACGTGTGTATAAGGAGTTGGAAGATAGTGGCCATGCTGATATATTGAATGATGCATCGCGCATTTTTAATTGCGATGAGACAGCATGTTTTTTAGCACCAAAAGGACCTAAAGTGCTTGCTAGGAAAggtgaaaaaaatgtttaccagCAGGTAAATGCTGATGACAAGGAATGTTTAACTGTGTTGGTAACTGGAAATGCAAACGGTTCCCTAGCCCCTACCACGGTATTGTTCAGCTATAAGCGGATACCTCAAGAAATTGCAGATAACTTTCCTTCAGACTGGGAAGGGGTTGAATCGTTAGGAGTTTCTGTAGAAGATGCGTCAGCATCTAACAATAATAATGGTGTTTTGGAAACCACAATGGAAACAACAGCAACTGCGTTACCTAATACTGTTGATGACAACATaaaaaagaaaataataagtccAACGAAAGttcaaaaaatacaatag
- Protein Sequence
- MVYLNDRMPGKNGAFLNYTEAAMLAAVNDVHLHKTPIRTAAKKFGVPRITLTNKVKGKSPMERKMDPTSILTPEEEHKICDWVQKMAKAGFPETTEQLIVSVEKYLKELKRPCVLFKHGRPGRTWVKAFIRRNPTISMRISQNLTASRARVTGAHLSEWYKRVYKELEDSGHADILNDASRIFNCDETACFLAPKGPKVLARKGEKNVYQQVNADDKECLTVLVTGNANGSLAPTTVLFSYKRIPQEIADNFPSDWEGVESLGVSVEDASASNNNNGVLETTMETTATALPNTVDDNIKKKIISPTKVQKIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634368;
- 90% Identity
- iTF_01182736;
- 80% Identity
- -