Apln016755.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- -
- Assembly
- None
- Location
- CADEBC010000602.1:7201715-7204105[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-14 2.1e-11 43.4 0.1 1 44 16 59 16 60 0.93 2 2 2.2 1.4e+03 -0.9 0.0 31 43 549 561 547 562 0.85
Sequence Information
- Coding Sequence
- ATGAAACCATCTCATTCCACACGTAAAAGAAGAGGGGAGTCATGGTCTGAAGACACGATGAAAGCTGCCATTAAAGCTGTGCAAAGAGGTCATTTGACTCAGCGATCAGCAGCAACAAAGTATAATATTCCGCGAAGAACTTTAAGAGATCATTTAAAAACAGGTCAAGAAATCAAACGTTTGGGAAGAAAGCCTATTTTAACGAATGAACAAGAAAAAGATTTAGCTTCGCGGATTAAAAGATTTGCAAGTATTGGGATTCCACTAACGCCTAAATTCATTAGAAAACAAGCTTTCTTATTTTGCGAGAGATatgatatcaaaaataatttcaataaatccAAAAGGATTGCTGGTGTAGATTGGTTGagattctttttaaatagaaatccATCCATTAGTAAACGAAAACCGCAAATAATGAACCCAGCTCGTGCACAAAAGTTGAATAAACCTATTGTTCAACAACATTTTCAGAGTATCCGCAAATTATATGATGAGTTAGATATACTGCGACATCCAGAAAGGTTATATAATATGGACGAAAAAGGATGTCGAATAACTGTGCATAAACAGCATACAGTTTTGGCTGAAAAAGGGAGCAAAAGGGTTCATCTCATTGCCCCGGAACATGCAGAGAATGTCACCATTGCGATGTGTGTGAATGCCATAGGTACAACAATTCCAGCTATGATCATTTTTAAAGGCCAAAGGCAAAGACCAGATCTAACAGAAAATCTACCAGCTGGAACGATAGTTAGAATGGCATCGAAGGGAAGTATGACTTCAGACCTATTTGTGGAATTTATTCAGCACCTGGCAAAACATAAAGTCGctgataaatgtttattaatttttgatggTGCAAAGTGCCATCTATCAGTTGAGGCGTTAGATGAAgctgaaaaaaatgatatagtTTTGTACTGCCTTCCTTCCAATACTACGCACGAGCTGCAACCGTTAGACAAATCGGTAAATAAATCCTATGAGCATCACTGGGATGAAGCTGTCCTGAATTTCCTGTCAGTTAACCCTGATAGGACATTGAAAAAAgccgatttcaataaaatattttcgcaAGTGTGGCCCAAATGTATGACACACACTAACATAGTGAACGGATTCAAAGCAACAGGCTTGTATCCTTATAAACCTGAAGCAATCCCAGAAGAAGCATTTGCTCCGTCAGTTTTATCTGAAATTCCATATCCTCAAAATCAAAACAAACCAATGCAGAATCCTAAATCTGATGCTAATGTTGACACTGACTCTGACGAAAATCAGCGTAATCTTGATATAAACACATCAAACATACTGGACTTGACTCCTGATGAATTTAATGTTATCAACATTGACGACAATCTTACTGTGACGCCGCGTACTGAACAGTGTGAcaatcttcaaatttttttaccTCAACCAACAGCATTAAAGGCTCAAAACATTTCTCGTATTGTTGATTATAGCTCATCTACTGATATTTCTGAAAATGAATTGGAAAATCCTACGCTGCAAGATTCATTCCATAACTTATGTGTTTCACCTTCCACAATTCCTGAAAATTTCTCTGTGTTACCTGAAGTGCCTGCAAACAAAGAAAGCTCTACGGGTAATGACATTGATATGGCAGTTCCAAGTTGTTCAGGTCTACAAAGACACATACGTCGAACATACAGCTCTGACTCGTCTGACATAGATAGTTTCATAATCAAGCCATCACAtgataagttaaaatattcagTTGAAGATGTCTATGGTTGTTCATCAGATgaagaaaatgaaattttatctaTCATTGATAAAGGAGTAACTACACCTAAAAAGCAAATAATCAATGTTGCGCAAGAAAACATAAATCAAAAAGCAAACCCTGATGATGATAAGTCTTGTTTTTCAGATGAAGAGAATGTCCCAttatcaaatttgaaaaaaccaagcaataaaacagaatttgaagactttttgccgactcCTAATTACGCTATAACTAAAACGAACCGTCCACGAAAGAAAGCTCTTAATTATAAGGGTCAACGTATTACTAAAGATCTCTTTGACAAAAAAGAtgaagataaaaagaaaacaaagaataCCAATACCAAAGAACATGAGAAAAACAAGAAAgataagattaaattaaaaaataaatcaataaaaacaaaagatagGTTGCCAAAAAAAGTTAAGTACATTGCTaatgaacaagaaaataaaaagaggaTTAATGAAAAAAAGGACGATACAGAAGAACATTGGTACTGCTATGCATGTcatgaaaacataaaattgGACATGAGACAATGTAAATTTTGCAAGAAGTGGTACCATGAGGAGTGTGTTGGCCTCACGAAACATGACGAAGACTTCATGTGTTCAAATtgcgaataa
- Protein Sequence
- MKPSHSTRKRRGESWSEDTMKAAIKAVQRGHLTQRSAATKYNIPRRTLRDHLKTGQEIKRLGRKPILTNEQEKDLASRIKRFASIGIPLTPKFIRKQAFLFCERYDIKNNFNKSKRIAGVDWLRFFLNRNPSISKRKPQIMNPARAQKLNKPIVQQHFQSIRKLYDELDILRHPERLYNMDEKGCRITVHKQHTVLAEKGSKRVHLIAPEHAENVTIAMCVNAIGTTIPAMIIFKGQRQRPDLTENLPAGTIVRMASKGSMTSDLFVEFIQHLAKHKVADKCLLIFDGAKCHLSVEALDEAEKNDIVLYCLPSNTTHELQPLDKSVNKSYEHHWDEAVLNFLSVNPDRTLKKADFNKIFSQVWPKCMTHTNIVNGFKATGLYPYKPEAIPEEAFAPSVLSEIPYPQNQNKPMQNPKSDANVDTDSDENQRNLDINTSNILDLTPDEFNVINIDDNLTVTPRTEQCDNLQIFLPQPTALKAQNISRIVDYSSSTDISENELENPTLQDSFHNLCVSPSTIPENFSVLPEVPANKESSTGNDIDMAVPSCSGLQRHIRRTYSSDSSDIDSFIIKPSHDKLKYSVEDVYGCSSDEENEILSIIDKGVTTPKKQIINVAQENINQKANPDDDKSCFSDEENVPLSNLKKPSNKTEFEDFLPTPNYAITKTNRPRKKALNYKGQRITKDLFDKKDEDKKKTKNTNTKEHEKNKKDKIKLKNKSIKTKDRLPKKVKYIANEQENKKRINEKKDDTEEHWYCYACHENIKLDMRQCKFCKKWYHEECVGLTKHDEDFMCSNCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00785930;
- 90% Identity
- -
- 80% Identity
- -