Basic Information

Insect: Archips xylosteana
Gene Symbol: stc
Assembly: GCA_947563465.1
Location: OX387348.1:5147014-5184969[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.069 7.2e+02 1.1 1.5 2 10 44 52 44 52 0.93

2 21 0.00024 2.5 9.0 20.0 4 19 60 75 58 75 0.93

3 21 2.9e-06 0.031 15.1 14.4 1 18 125 142 125 143 0.95

4 21 1.8 1.9e+04 -3.4 0.2 8 11 148 151 147 151 0.86

5 21 0.00067 7 7.6 12.0 1 19 184 202 184 202 0.97

6 21 3e-05 0.32 11.9 11.8 1 19 243 265 243 265 0.87

7 21 0.0085 89 4.0 6.8 1 11 305 315 305 316 0.94

8 21 0.11 1.2e+03 0.4 0.2 4 10 320 326 319 327 0.93

9 21 1.8e-05 0.19 12.5 14.1 3 19 334 350 332 350 0.91

10 21 0.57 5.9e+03 -1.8 2.5 4 11 403 410 402 411 0.90

11 21 0.11 1.2e+03 0.4 0.2 4 10 415 421 414 422 0.93

12 21 1.8e-05 0.19 12.5 14.1 3 19 429 445 427 445 0.91

13 21 2.2e-06 0.023 15.5 10.3 4 19 750 765 749 765 0.95

14 21 0.57 5.9e+03 -1.8 2.5 4 11 818 825 817 826 0.90

15 21 0.11 1.2e+03 0.4 0.2 4 10 830 836 829 837 0.93

16 21 1.8e-05 0.19 12.5 14.1 3 19 844 860 842 860 0.91

17 21 0.57 5.9e+03 -1.8 2.5 4 11 973 980 972 981 0.90

18 21 0.11 1.2e+03 0.4 0.2 4 10 985 991 984 992 0.93

19 21 1.8e-05 0.19 12.5 14.1 3 19 999 1015 997 1015 0.91

20 21 1e-07 0.0011 19.8 12.7 1 17 1262 1280 1262 1286 0.83

21 21 0.00049 5.1 8.0 6.7 1 14 1292 1304 1292 1304 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.069	7.2e+02	1.1	1.5	2	10	44	52	44	52	0.93
2	21	0.00024	2.5	9.0	20.0	4	19	60	75	58	75	0.93
3	21	2.9e-06	0.031	15.1	14.4	1	18	125	142	125	143	0.95
4	21	1.8	1.9e+04	-3.4	0.2	8	11	148	151	147	151	0.86
5	21	0.00067	7	7.6	12.0	1	19	184	202	184	202	0.97
6	21	3e-05	0.32	11.9	11.8	1	19	243	265	243	265	0.87
7	21	0.0085	89	4.0	6.8	1	11	305	315	305	316	0.94
8	21	0.11	1.2e+03	0.4	0.2	4	10	320	326	319	327	0.93
9	21	1.8e-05	0.19	12.5	14.1	3	19	334	350	332	350	0.91
10	21	0.57	5.9e+03	-1.8	2.5	4	11	403	410	402	411	0.90
11	21	0.11	1.2e+03	0.4	0.2	4	10	415	421	414	422	0.93
12	21	1.8e-05	0.19	12.5	14.1	3	19	429	445	427	445	0.91
13	21	2.2e-06	0.023	15.5	10.3	4	19	750	765	749	765	0.95
14	21	0.57	5.9e+03	-1.8	2.5	4	11	818	825	817	826	0.90
15	21	0.11	1.2e+03	0.4	0.2	4	10	830	836	829	837	0.93
16	21	1.8e-05	0.19	12.5	14.1	3	19	844	860	842	860	0.91
17	21	0.57	5.9e+03	-1.8	2.5	4	11	973	980	972	981	0.90
18	21	0.11	1.2e+03	0.4	0.2	4	10	985	991	984	992	0.93
19	21	1.8e-05	0.19	12.5	14.1	3	19	999	1015	997	1015	0.91
20	21	1e-07	0.0011	19.8	12.7	1	17	1262	1280	1262	1286	0.83
21	21	0.00049	5.1	8.0	6.7	1	14	1292	1304	1292	1304	0.96

Sequence Information

Coding Sequence: ATGATGTGTAATGTTACAGAGGGCAAATGGCGCTGCCCGGCCTGCCAGAACACGAGCGAAGAGATACCGAGCGAGTACCGCTGCATGTGCGGCGCCGTGCGCGCGCCCGACTACCAGCGCGGCGCCGGCGGCGCTCACACTTGCGGACAGGCGTGCCAGCGCCCGCGCTCGTGCCCGCACCCGTGCTCGCTGCCGTGCCATCCGGGGCCCTGCCCGCCCTGCCAGGCCACCGTCACCAGGCCCTGCTTTCCTAGGCTAGAGATGAATATTTCGGTGTGTAGGCAATGCGGTTGCGGAGCGGAGACGCGTTCAGTCGTGTGCAGCAGCAAGCTGGCGCAGCTGTGTGGGCGCGTGTGCAGCCGGCGGCTCGCGTGCGCCGCGCACCGCTGCCCGCAGCAGTGCCACGAGGGGCCGTGCGAGCCCTGCGCCAGCACCGTCGACCAGGTGTGCCACTGTCCGGCCGCGAAGTCCCGTTCGGTGCCGTGCACGGCCGAGACCGGCGGCAGCGCGTCGTGGTCGTGCGGCGCCGAGTGCTCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGAGCCGTGCCACGCGCCGCCATGCGCGCGCTGCCGCCTGCTGCCCGCCGCCGTGCCCACGTGCCCGTGCGGCCGCACCAAGCTGGACCCGGGGGCGCGCAAGGTGTGCACGGACCCGGTGCCGCTGTGCGGGAACATCTGCGCCAAGCCGCTGCCGTGCGGGCCCGCCGGCGACAAACACTTCTGCAAGCTTGACTGCCACGAAGGTCCATGTCCCGTGTGTCCCGACAAGACCCCGCTGCCGTGTCGTTGCGGGCACTCCAACCGCGTGGTGCCGTGCGCCGAACTGCCGCAGATGTTGGACAACGTGTTCTGTCAGAAGAAGTGCACCAAGATGCTGTCGTGCGGGCGGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACACATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCACTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACACATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACCATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACCATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACCATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACACATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCACTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACACATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCACTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACACATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACCATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCACTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACACATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTCAGTACACCCCCCACCACACGCTGCCACCATAGCTGCGGGCGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGCTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGCGCCAGTTTCGAGGAGCTGACGTGCGAGTGCGGCGCCGAAGTGATTCTGCCGCCCGTGCCGTGCGGCACCAAGCGGCCCTTGTGCGCCGCGCCGTGCCGCCGCCCCCGCGCCTGCCAGCACCCCCCGCACCACTCCTGCCACGAGGGCGAGTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGCTGCCACGGCCAGCACGAGAATCCGGCCGAAACCTTCGGCCGGGCCGAAATTACTTCGCGGCCTCTCGCGGCTCTCGCATCGGGAGCGCTCGGCTTAATCCGGCCACGCTCGGCCGGGTAAAGGAACGCAAGACTATCCCGTGTTCGCAAGAAGATTTTTCTTGTGGACTGCCTTGCGGGAAACCGCTGCCCTGCGGAAAACACACCTGCCTAAAGATCTGTCATAAAGGGCCTTGTGACGCCGGCAAGTGCACTCAGCCGTGCAACGAGAAGCGGCCGAGCTGCGGGCACCCGTGCGCGGCGCCGTGCCACGCGGGGCAGCCGGGCGGGGGCGGGGCGGGGGGGCAGCCGGGCGGGGAGCCGCGCGCCTGCCCCAGCGCCGCGCCCTGTCGCAAGCTGGTGCGCGCCACGTGCCCCTGCGGCCGCCGCGCCGCCGAGCGCGCCTGCGCAGACAACGCGCGCGACCTGGCCAACGCCGCGCCCTGCCGCAAGCTGGTGCGCGCCACCTGCCCCTGCGGCCGCCGCGCCGCCGAGCGCGCCTGCGCAGACAACGCGCGCGACCTGGCCAAAATAATCAGCGTACTGGCAGCTTCCAAGATCCAGGAAGGTGGTTCCGTCGACCTATCCGAAGTTCAACGTCCCGCTTCTATGCTGAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCGGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGACCACGTGCGCGCCACCGCCGCGCGCGAGCCCGGCTTCGCGCGCCAGGTGCACGACCGCCTCACCGACCTGGTGCAGCTGGCCAAGAAGTCGAAGCAGAAGACGCGCGCACACTCGTTCCCGTCGATGAACTGGCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCAGTTCGGCTGCGAGTCTGTCGCGTACGACGCAGAGCCCAACCGGAACGTCGTCGCCACAGCAGACAAGGAAAAGTCATGGCTGCCGGCGATGAGCGTGCTCGAAGTGCTGGCGCGCGAGACCGGGAAGCGCAAGGTGCCGGGGCCCGTGCTGCGCGCGCCCGCGCCCGCGCCCGCGCCCGCCGCCGCCGCCAAGTCGGGAAGCGGCTGGGCCACGCTAACGTCTACCAACGCGTGGGCCTCGCGAGCGCAGAAGAAGGCCGAGGACGCTCCCAAGATCGATTACTTTGATAACCCGCCTGACAACTAG
Protein Sequence: MMCNVTEGKWRCPACQNTSEEIPSEYRCMCGAVRAPDYQRGAGGAHTCGQACQRPRSCPHPCSLPCHPGPCPPCQATVTRPCFPRLEMNISVCRQCGCGAETRSVVCSSKLAQLCGRVCSRRLACAAHRCPQQCHEGPCEPCASTVDQVCHCPAAKSRSVPCTAETGGSASWSCGAECSRVLACGAHVCREPCHAPPCARCRLLPAAVPTCPCGRTKLDPGARKVCTDPVPLCGNICAKPLPCGPAGDKHFCKLDCHEGPCPVCPDKTPLPCRCGHSNRVVPCAELPQMLDNVFCQKKCTKMLSCGRHRCRASCCAAASHRCAVLCGRLLACQLHRCEQYCHTGHCAPCTRASQYTPHHTLPHIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRALRAHRCRASCCAAASHRCAVLCGRLLACQLHRCEQYCHTGHCAPCTRASQYTPHHTLPHIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRAVLPHRPLRALHPRQSVHPPPHAATIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRAVLPHRPLRALHPRQSVHPPPHAATIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRAVLPHRPLRALHPRQSVHPPPHAATIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRAVLPHRPLRALHPRQSVHPPPHAATHSCGRTAAARRAAPPRRTAAPCCAAACWPASCTAASSTATPATARPAPAPLHRCEQYCHTGHCAPCTRASQYTPHHTLPHIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRALRAHRCRASCCAAASHRCAVLCGRLLACQLHRCEQYCHTGHCAPCTRASQYTPHHTLPHIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRAVLPHRPLRALHPRQSVHPPPHAATIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRALRAHRCRASCCAAASHRCAVLCGRLLACQLHRCEQYCHTGHCAPCTRASQYTPHHTLPHIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRAVLPHRPLRALHPRQSVHPPPHAATIAAGAPLPRVVLRRRVAPLRRAVRPPAGLPAAPLRAVLPHRPLRALHPRQFRGADVRVRRRSDSAARAVRHQAALVRRAVPPPPRLPAPPAPLLPRGRVPALRRAHRQALPRPARESGRNLRPGRNYFAASRGSRIGSARLNPATLGRVKERKTIPCSQEDFSCGLPCGKPLPCGKHTCLKICHKGPCDAGKCTQPCNEKRPSCGHPCAAPCHAGQPGGGGAGGQPGGEPRACPSAAPCRKLVRATCPCGRRAAERACADNARDLANAAPCRKLVRATCPCGRRAAERACADNARDLAKIISVLAASKIQEGGSVDLSEVQRPASMLKTLECDDECRVEARTRRLALALQIRNPDVSAKLAPRYSDHVRATAAREPGFARQVHDRLTDLVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEQFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLARETGKRKVPGPVLRAPAPAPAPAAAAKSGSGWATLTSTNAWASRAQKKAEDAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -