Basic Information

Insect: Archips xylosteana
Gene Symbol: Zfy2
Assembly: GCA_947563465.1
Location: OX387357.1:19341595-19353798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0043 0.31 12.3 0.3 1 23 317 340 317 340 0.92

2 11 0.85 62 5.1 5.7 1 23 356 378 356 378 0.90

3 11 2.2e-05 0.0016 19.5 2.5 2 23 384 405 383 405 0.97

4 11 0.04 2.9 9.3 0.2 5 23 413 432 410 432 0.92

5 11 0.011 0.8 11.1 0.7 1 23 435 457 435 457 0.95

6 11 0.00081 0.059 14.6 0.1 2 23 535 556 534 556 0.95

7 11 0.35 25 6.3 0.2 2 23 576 598 575 598 0.96

8 11 1.3e-06 9.1e-05 23.5 4.1 1 23 604 626 604 626 0.98

9 11 0.00021 0.016 16.4 2.8 2 23 632 653 631 653 0.96

10 11 0.14 10 7.5 5.3 2 21 660 679 659 682 0.93

11 11 0.84 61 5.1 2.6 3 19 721 737 720 742 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0043	0.31	12.3	0.3	1	23	317	340	317	340	0.92
2	11	0.85	62	5.1	5.7	1	23	356	378	356	378	0.90
3	11	2.2e-05	0.0016	19.5	2.5	2	23	384	405	383	405	0.97
4	11	0.04	2.9	9.3	0.2	5	23	413	432	410	432	0.92
5	11	0.011	0.8	11.1	0.7	1	23	435	457	435	457	0.95
6	11	0.00081	0.059	14.6	0.1	2	23	535	556	534	556	0.95
7	11	0.35	25	6.3	0.2	2	23	576	598	575	598	0.96
8	11	1.3e-06	9.1e-05	23.5	4.1	1	23	604	626	604	626	0.98
9	11	0.00021	0.016	16.4	2.8	2	23	632	653	631	653	0.96
10	11	0.14	10	7.5	5.3	2	21	660	679	659	682	0.93
11	11	0.84	61	5.1	2.6	3	19	721	737	720	742	0.90

Sequence Information

Coding Sequence: ATGGCCGCAGCACGTGGTACACCCGCAATCGCGGACCTGGGTACCGTCACGATGAATTCCGAAGGTTACCCTGTACTTATATTGCCAAAAAAGTGTACTACGTTAGAAACCAACTGTGGGGTATCGGACAACGTTTTTATAGAAGTCAACATTTCTTCACCCGACACAGAGGGGAAGGAGACGTGTCTGTACTCGGGTTTTTGTAACGTGAAGTTAATAGACAGTTATGCTATGAATGTGTCTCAAACTCAAAATCCACCGAAAGACATGACTACGGAGTACAATGACAGCGATCTTATTTCTGTGTTAGTTGATGAATCAGGCAACCAAATAGCTGATGCGTTCAACCAATCTCAGGTATGGATAGACCCAGCTAGGAGCCCATATGTCTACAATCATTATGACACTGAAAATCCTGAGCATTATTCAATCTACCACAATACTAGAACAAACCACATAACTGTTGAACAGCACAATACTTATATAACTCAAAATGTGTATAGCTGTAAAGAACCATCATACACGGCTGCAGATGATTTTGAACATAAAAAGTTCCGGAAGCTTCAAGTGAGTGAATCAAGCGCCCAGCAGACGGCAACAGAGCCTAACTTTAATTTGTATGAAGAGGATGAGTTTGAATGTGGAGTGTTTCTCTCGAATTTACCTGAAGAGATCCTTAATGAGAAGGAGAATAGGGTAAGGGAAGAAAAGAAGTATATTGGTCTACCAAGTGAGAATGGTGCGCTGAAGCAGTTGATGTCCTCCGACATACAGTCTTCTACGAAGCAGAGGAAGACCATATTGTTCCTCGGTCATGATTCTCATTACGGACAGACAATACAGAAGATTGCTATGAATGATCCATTCCTAGTTTGTTCCGTGAAGGAGGAGGTCCAGTCTCAAGTGGTGTATGAAGAACCAAACTACTCCAACCCGAATCAAAAGAAATACCAATGCGACAAATGCAAACAGATATTCGACCAAATAATAGAATTTCGCCAACACATGGTCGGCGACCACATCAGTCCAAGAAACCTGGACGGGAAAACCATAGGCGAAATAAAGTTCCTTTGCACTGAATGCGGGAAACATATAAAATCCCAAAAGAAGTTCGAGCAGCACTGCATGAGCCACGGAGACCCGGAACTAGAATGCAGTAAGTGCCATAAAGTCTTTGCTTCAAAATTTACCTTACGGGCCCATTATAAGATCCACAGTCGTAAATACGGATGCATTTACTGTTCGAAAACATACTCGAAAACTGAAGCTTTACGGGCACATATTGGAAAAGTTCATTGCCTTTTTCTGTGTGATAATTGTGACTTCAAAACGAACAAACGAGCTGATTTGAAGGAGCATCTGCTGATGCATAAAAGTGGTTTAAGTGATACAGAGACTCTCCTCTCGCTAGATGGTGATGATTTGGAAGATTCTAATGAGTCTGATATCATCACTCTACCCAAGCCTGAGGTGCAGAATGCTGACGCCCAGTTCATTAATGATGAGGAAATCAGGAGAGCCGACTCGGTGATAGCCAAAGTGATGTCCAACGAGATCTTCGGCTCCAAAGGGAAGACGAGGCAGTATAGAAAGTGTAATAAGGTATGCGATGTATGCCTAAAAGTGTTCGATCGCATTGGGGACCTTAAGCGGCACCTAATAGAGCACATAATTAAAAGCACCCTCGATAAGATACCCGTCAGCCGCAACGGGACCCTGAACATCCAATGCGAGGTCTGTCAAGCCGAAACCTTCACCAAAGTTGACAGGTACAAGGCCCATTTACGGGAACACGCCAAACTAACCATCTACAAGTGCACTTTCTGCGATAAGTCCTTCAGCGACTCCAGCAATTTCTCAAAACACAAGAAAATTCACGGTACGACCTATCTACAATGCGATCTGTGCCACAGGAAATTCAACTCTAAACGTATGCTGATACAGCACATGGAATACCATAACAAAAACGAACCAATCCCCTGCAGATTTTGCCATAAGATGTTCCATTTTGAATCCATGTTGAACAAACATATCAAATGTGCACATGCTAATACTCTAAACAAGTTTAAATGTAGGTTCTGTTGCAATTATTTCAAAACTTTAAAGGAGAAATGGGATCATGAATGGTCAATTCATAATGTTAGGAAAATGATAGTAGACTGTCTGATGTGTGATTCTAAGTTTAGGAAGTATACTGAGCTCAAAAAGCACTGTTCTATCGTTCATAATGTGGAGATACCACCGGCAAAGAAGCTGTGCCCTAATTCGAAATAG
Protein Sequence: MAAARGTPAIADLGTVTMNSEGYPVLILPKKCTTLETNCGVSDNVFIEVNISSPDTEGKETCLYSGFCNVKLIDSYAMNVSQTQNPPKDMTTEYNDSDLISVLVDESGNQIADAFNQSQVWIDPARSPYVYNHYDTENPEHYSIYHNTRTNHITVEQHNTYITQNVYSCKEPSYTAADDFEHKKFRKLQVSESSAQQTATEPNFNLYEEDEFECGVFLSNLPEEILNEKENRVREEKKYIGLPSENGALKQLMSSDIQSSTKQRKTILFLGHDSHYGQTIQKIAMNDPFLVCSVKEEVQSQVVYEEPNYSNPNQKKYQCDKCKQIFDQIIEFRQHMVGDHISPRNLDGKTIGEIKFLCTECGKHIKSQKKFEQHCMSHGDPELECSKCHKVFASKFTLRAHYKIHSRKYGCIYCSKTYSKTEALRAHIGKVHCLFLCDNCDFKTNKRADLKEHLLMHKSGLSDTETLLSLDGDDLEDSNESDIITLPKPEVQNADAQFINDEEIRRADSVIAKVMSNEIFGSKGKTRQYRKCNKVCDVCLKVFDRIGDLKRHLIEHIIKSTLDKIPVSRNGTLNIQCEVCQAETFTKVDRYKAHLREHAKLTIYKCTFCDKSFSDSSNFSKHKKIHGTTYLQCDLCHRKFNSKRMLIQHMEYHNKNEPIPCRFCHKMFHFESMLNKHIKCAHANTLNKFKCRFCCNYFKTLKEKWDHEWSIHNVRKMIVDCLMCDSKFRKYTELKKHCSIVHNVEIPPAKKLCPNSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00654719;
90% Identity: iTF_00021706;
80% Identity: -