Axyl001379.1
Basic Information
- Insect
- Archips xylosteana
- Gene Symbol
- ZBTB41
- Assembly
- GCA_947563465.1
- Location
- OX387370.1:8675296-8679565[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.28 20 6.6 0.4 2 23 44 66 43 66 0.91 2 27 0.00023 0.017 16.4 1.2 1 21 161 181 161 182 0.95 3 27 3.5 2.6e+02 3.2 0.3 3 19 191 207 190 210 0.87 4 27 3.1 2.3e+02 3.3 6.0 1 23 217 240 217 240 0.94 5 27 0.036 2.6 9.4 1.5 1 23 247 270 247 270 0.95 6 27 2.4e-05 0.0017 19.4 0.5 2 23 276 297 275 297 0.92 7 27 5.1e-06 0.00037 21.5 0.3 1 20 303 322 303 325 0.94 8 27 3.4e-05 0.0025 18.9 5.0 1 23 331 353 331 354 0.96 9 27 3.6 2.6e+02 3.1 0.0 3 19 402 418 401 420 0.94 10 27 0.14 10 7.6 1.8 2 20 496 514 495 517 0.89 11 27 0.038 2.8 9.3 4.1 2 21 522 541 521 544 0.94 12 27 0.52 38 5.8 0.3 1 22 548 569 548 569 0.93 13 27 4.1 3e+02 2.9 1.1 1 23 576 599 576 599 0.88 14 27 0.00032 0.023 15.9 2.5 1 23 606 629 606 629 0.96 15 27 0.069 5 8.5 2.3 1 23 634 656 634 656 0.95 16 27 0.57 42 5.7 0.1 3 23 710 731 709 731 0.92 17 27 0.0063 0.46 11.8 0.2 2 23 756 778 755 778 0.96 18 27 0.00043 0.031 15.5 2.0 2 23 802 823 801 823 0.96 19 27 0.0018 0.13 13.5 1.4 1 21 827 847 827 848 0.96 20 27 0.04 2.9 9.3 0.7 1 23 889 911 889 912 0.95 21 27 0.1 7.3 8.0 0.5 2 23 938 960 937 960 0.96 22 27 0.032 2.3 9.6 0.4 2 23 983 1004 982 1004 0.94 23 27 0.00045 0.033 15.4 0.0 1 23 1008 1031 1008 1031 0.97 24 27 0.086 6.3 8.2 2.1 1 23 1035 1058 1035 1058 0.97 25 27 0.57 41 5.7 0.8 1 23 1063 1088 1063 1088 0.94 26 27 0.0014 0.1 13.9 2.1 1 23 1097 1120 1097 1120 0.97 27 27 0.0002 0.015 16.5 0.5 1 23 1130 1153 1130 1153 0.97
Sequence Information
- Coding Sequence
- ATGACAGAGAGCATTTCTTTTGTTTTAGACAAAAAATCAGTCACCAATGCCACCATCGAGAGACGAAACGCCGAGTTAATAGTACTCTACTCGACCGCGTACCCGTTCAGGCTTCCCGGCAAACTCATGGTGTGCGTGTATTGCTGCGAGAAATTCGAGGACCCCTCATTGTTCAGACTGCATATGGACGGCGAGCACCAACAGTTCAAAGTTTGGATGACTTTCGTCCATGTGTCTGACGGAGATTTGAAGGTCGACTGCACCGATCTCCGCTGTAGAACTTGTTGCCAACGCTTTCCAAAGCTAAAAGACGTGGCGGAGCATTTGCTCAGAGTCCACGGCCACCCGCTAGATTTAAATTACTATCTAGGTTTACAACCGTTCACGCTATTCAAGAACATGTTACTGTGTGCTGTGTGCTCAGACAAGTTCCCTTGTTTACGAACGTTGAGCAAACACACCCAAACGCATTTCGTTAAGTTCACCTGCGAGACTTGCGGAAAATCCTATTCCACTACGGCATCTTTGCACGCCCATAGAAAATTCTGCAATAAAGGAAATGGGCCGATTTGTAGAAAGTGTCTAAAATCATTTCCGAATCTAGAAGCTAGGAGGGAGCATTTTGAAAAATCCAAATTATGTCGTCAGCATACATGCAATTGTTGCGGTGAGAGATTCCATACTTGGAACCTCAAACAACAGCACATGCTACAGGTTCATGGAAAGAAAAAGAAGGAACACTGCTGCCCAGAATGCAAGGCTATCTTTGCCTCGCGCCCGTCATTCGCGATTCATTTTAGGATAAACCACACTAACGACTACGTCCAATGCACGTACTGCGATCGGAAATTTGACACAGAATACAATTTAAAACGACACGTTGTTGGTCACACGGGAGAGAAGTCTTTTGAATGCCCGGTATGTTCCAAAACATTTCCGAGGAGTAACAATCTGACGCAACACATGTGGATTCACAAGGAAGTTAAAAGGTTTGAATGTAAACAATGCAATAAGCAGTTTACTCAAAAGATAAGTTGGAAAACTCATATGCGATCTCACCACCCAGAGCTTTGCGAGTTCACTCAGTCTGAGAAAATAAAAACTGGAGAAATCAGTCGCTTCCGAATGGCGAAACGGAACGCCGAGGTTATCTTGCAGTACTCGACTGTGTATCCGTTCAGGCTGCGCTCTAAGTCGATGTTTTGCGTTTACTGCGACGATGAGTTCGAGGATCCGGCGGAGTTCCGCACGCATGCGGCCGCGTGCCAACGCTCCTTCCCCACCGCCAAAGCCTTCGCATACAGCCTCCGTAACCAGGAACATCTTAAAATCGAGTGCTCCGACATGAGCTGCCGCGTCTGTAGTACCCCTTACCACACCCTGGAGGAAATGGCCCAGCATGTTTTCGATAACCACGAAAACACTACCCTAAACCTAACGTATGATTTGGGCTTGCAACCTTATAAACTAGACCAAGACAAGTGGCATTGCTTCATATGCCAAAAGAAGTTTCCATCTCTTACCAAACTTGGCAGACATACGCCAACTCATTACAGAAAGTGCACTTGTGAGATCTGTGGACGAACGTATCTGACGAAAGAAGCCTTGAAGTACCACATGAGGTGTAGCCATTCTGATAATCACGCGTGTCGTAAGTGCTGGCAAGAGTTTCCTTCCTTAGAAGAAAAAAAGGAACATATCAGGTCCACGAAACCTTGCTGGCCTTTCTGCTGTGTATATTGCGGGGATAGGTTTCTATCTTGGGAGAACAAGCAGAAACATCTTGTCGAGGCACATGCTCGTCCCAAAAAGACATATAAGTGTCCGGAGTGCGATAAAACTTATGATTCGAGAAAATTGTTTTATAGTCATTACAAACTTACCCACACCGATGAGACCTTTACTTGTTCCTGTTGCGGTTTGAAGTTTGAGAGTAAAAAAACATTAGAAGATCACAGAATCGGGCATACCGGGTACACGTTGGAAATTCGCGGGCGTAGTGACAGTGAGAGGGAACCAAAACCGAAAATAGTTCTCGTTTACCAGACACCACAGCGGCGTAACGCCGAACTAATACTAAGATTCTCAAGCGCCTACCCTTTTAAAACAAGGTTCACGCAAATACTCTGCGCGTATTGCCTTGATGAATTTGATCCCCTTTCAAATCTACGGTACCATATGCAATCCGAGCACCGCAATTCTGACTTTAAGAATGTATTCTATAGAACAAACGACAATTTAATAAAAGTAGATATAACTAACCTTAAATGTAAAATCTGTGATCAAACGATAAATGATATTGATACATTAATGACACACTTGTCCACGGTACATGAAAAACCGGTTAAATTCAACGCTCGGTTTGGAGTATTGCCCTATAAAGAGAACCCTAACGGCGAATGGCCGTGCGTATATTGTCACAAAACATACTCCTCGTTTACTCAATTCAATCGTCACATTGGCACTCATTTTATGAATTTTAGCTGTGAAAAGTGCGGTACGACCTTCATATCAGATCACGCTTTGCGAGACCATCATCGTCAGGTCAAGTGTTGCAGAACGGCGTACAAAGCTCGTAACGGTAGGGTTATGCGTTCTCGGCGCAATGCAGAACTGATACTGCAGTGGTCTACCGCTTGTCCCTTCAGAACATGGAAGAGCAATTTCAGCTGTGTATTCTGCCGCGTACAAACGAGTGATCCAAGTGGCCTTAGGACCCACGTGGCTACTCATCACGCCGACTATCATGTTCAAGATGCTTTTTATAGAAAACTAGGAAAGGAATTCCTTAAAATTGATATAACTAATCTACATTGTAAACTCTGCTTTATGCCTGTTGAATCCTTAGACGCTCTGACAAACCATTTAAAAACTGACCATCAACAACCTATAAATGACGAACAGCTCGGTGTTATACCGTTCCGGCTGAACGACGGATCTATTTGGAAATGCACTATTTGTCCGAATCAATTCCAAGACTTTGTATCGCTGAAGAAACATACGGCTGAGCATTTGCAAAACTATGTGTGCGATACGTGTGGAGAGGGGTTCATTACGGAATCCGCTATGATCGCTCACACCAAGATACCGCACGAAAACAAATATAACTGTAGCCGATGCGTGGCTACTTTCTCGTCACTAGACGAGAGAAACCACCACGTAAAAACTCAGCATACAAATACACCTTATATGTGCAACTATTGTAAAGATAAGCCACGCTTCTCTAATTGGGAACTTCGCAAGAAACACTTAATGGAAGTCCACAACTATACTTCTGGCGCAGATAAATACGAGTGTGTTACTTGCCAGAAAACTTTCAAAACTCGCTCCGGGAAGTATAATCACATGGCCAGAACGCATAGAGTGAAAAAAGACAGCGAACTTAATTACCCTTGCCCGAGTTGCCCTAAGGCGTTCACTACTAAATTGTTTCTGGATAAACACATGGCCAAAAAACATTTCAATTTGTAG
- Protein Sequence
- MTESISFVLDKKSVTNATIERRNAELIVLYSTAYPFRLPGKLMVCVYCCEKFEDPSLFRLHMDGEHQQFKVWMTFVHVSDGDLKVDCTDLRCRTCCQRFPKLKDVAEHLLRVHGHPLDLNYYLGLQPFTLFKNMLLCAVCSDKFPCLRTLSKHTQTHFVKFTCETCGKSYSTTASLHAHRKFCNKGNGPICRKCLKSFPNLEARREHFEKSKLCRQHTCNCCGERFHTWNLKQQHMLQVHGKKKKEHCCPECKAIFASRPSFAIHFRINHTNDYVQCTYCDRKFDTEYNLKRHVVGHTGEKSFECPVCSKTFPRSNNLTQHMWIHKEVKRFECKQCNKQFTQKISWKTHMRSHHPELCEFTQSEKIKTGEISRFRMAKRNAEVILQYSTVYPFRLRSKSMFCVYCDDEFEDPAEFRTHAAACQRSFPTAKAFAYSLRNQEHLKIECSDMSCRVCSTPYHTLEEMAQHVFDNHENTTLNLTYDLGLQPYKLDQDKWHCFICQKKFPSLTKLGRHTPTHYRKCTCEICGRTYLTKEALKYHMRCSHSDNHACRKCWQEFPSLEEKKEHIRSTKPCWPFCCVYCGDRFLSWENKQKHLVEAHARPKKTYKCPECDKTYDSRKLFYSHYKLTHTDETFTCSCCGLKFESKKTLEDHRIGHTGYTLEIRGRSDSEREPKPKIVLVYQTPQRRNAELILRFSSAYPFKTRFTQILCAYCLDEFDPLSNLRYHMQSEHRNSDFKNVFYRTNDNLIKVDITNLKCKICDQTINDIDTLMTHLSTVHEKPVKFNARFGVLPYKENPNGEWPCVYCHKTYSSFTQFNRHIGTHFMNFSCEKCGTTFISDHALRDHHRQVKCCRTAYKARNGRVMRSRRNAELILQWSTACPFRTWKSNFSCVFCRVQTSDPSGLRTHVATHHADYHVQDAFYRKLGKEFLKIDITNLHCKLCFMPVESLDALTNHLKTDHQQPINDEQLGVIPFRLNDGSIWKCTICPNQFQDFVSLKKHTAEHLQNYVCDTCGEGFITESAMIAHTKIPHENKYNCSRCVATFSSLDERNHHVKTQHTNTPYMCNYCKDKPRFSNWELRKKHLMEVHNYTSGADKYECVTCQKTFKTRSGKYNHMARTHRVKKDSELNYPCPSCPKAFTTKLFLDKHMAKKHFNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -