Axyl021739.1
Basic Information
- Insect
- Archips xylosteana
- Gene Symbol
- -
- Assembly
- GCA_947563465.1
- Location
- OX387350.1:9005174-9007958[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-11 4.5e-08 33.4 0.0 4 40 16 52 14 55 0.89 2 2 6.7 1.2e+04 -3.1 0.0 28 42 381 395 381 398 0.76
Sequence Information
- Coding Sequence
- ATGGCATTCAAAACTGAAAGAAAAGAGAGGCTATACGAGCAGGCTACACTCGAAAAAGCCGTAGAAGAGATTCGCAATAATCAAATAAGTTTATCTCAGGCAAGCTCAACGTACAATATACCAAAAGGAACATTACATAACAAAGTACACGGCAAAACGCCTTTAGTATGCAAAAAAGGCCCAAGCACGATATTGAGACATGAAGAGGAAAGCCATATTGCTACATGGATAATAAATATGGCTAAAGTTGGCTATCCCGTTTCTCACGATGACCTCAAGGATACCGTAGCACAGTTGTTTGAAAAAAGAGGTCAACCTGACATAAAACCCGGTAAGAAGTGGTTTCGCCTTTTTCTAAATAGGCATCCGGAAATAACACAACGACATGCAGAAATTATTTCAAAAGCAAGAGCTTCCGTTACAGAAGTTGGCATCAGAAAATGGTTTGCGGACTTGACGAATTATATGCTGGAACAAAATACAGAAGAAATATTGAACTGCCCCGAACGTATTTTCAACCTTGACGAAACTGGTGTGCAGTTGTGCCCAAAATCAGGAGCTGTATTAGCTCCAAAAAACTATCGAACTATGTACACAATAGCTTCCGGGCAGGAAAAACAATGCGTAACCGTACTATGCAATTTTTCTGCCAGCGGTGGAATAGTACCTCCATTCGTAGTATATCCATTGCAAAGAATCTCCAAAGAAATCGCTCAATCGGTGCCAGATGAATGGGGAATCGGCAGATCGGATTCCGGGTGGATGACGAGTGCGACGTTTTTGGAGTATATGAGAGAAATATTCCTGCCATGGCTTCAACTGAAAAACATTCAACTGCCGGTTATCCTTTTCGTCAACGGCCATAAAAGCCACATCAATATTGAGCTGCATGATTTTTGCGTCGAGCATCAAATCATCGTATACTGTTTACACCCCAACACAACACACATCATGCAGCCTTGTGACGTAGGCATATTTGGACCGCTAAAAGCTGCATGGAAAAACATGGCGTGTGGTCTATCCCCCTTTAACCCTGATGCGGTTGACTATAACAAGTGCATATCCACCAGAAAAGATGACATATCAAGAGAAGTAGCTTTACAGGACTATAAGACTACCATCTCTGTTATTCAGAAAACGATCAGCAGCCAAACACTTGAAAAATACAAGGACTGCAGAGAGCAAGATAAAAGACTGAAAAGCACACTCTTCCTTTTTTGGAACAAATGTATGAACAAAGTTGACAACATGATGTTGACGCAATCTAATATTGATGATTCGAACACTGCGATTAACGTTTCAATATTAGACAATCCAACTAATACACAAGCGAATCATCACAAGACTAATACACAAACGAATCAGGGGGCTTCTACACAGACGAATCATGAGATTGATACACAAACGAATCAAGAGACTAATATACAGACGAATCATGAGGCTTATACGAAAACGAATCACGAAGAAGATTTATCAATGACTCTAGGCATTGATTCAATTGTTGAAGGGCTTATTGATATTGAGAACATACCAATTGATATCCAGGGCTGTAACGTATTTCTTGATGACATTCCTTTAGAAGAGTATGATAAAAACACCGCTGAAACATCATCAACAAATCGTATAATTCAAGAAGATACTGCTTCAATCAACGGGAGTCATTTAATAGAAACCAATAATCAGGCAAGCATTATGAAGACAGCAAATATAAATCCACCTGATACACCTATGCAAGCTCGAAAAGACGCTAGTGAATCAACACTGACTGTCGAACCGATGATGGACCCTGTAATGACATCTACACCAAAAGAAGCAATTCCCCATACGGAGCAAACCTATACTGACAAAACACCTGATCAAAATAGCTCGGTTCTAGAAGAGTCTTCGGATCAGAGTATATATATTGGTGACTTATTCAAAATTCCCGTAGAAAAAAAACCTGTAAAACGGAAATTCCATACGACGTCACCGATGCCTCTAGCTATTACGTCTAAAAAGTTCAAAGAGTATATAGAAAATAAAGAGAATGATAAGAAACGGAAGGCTGATGAAATAAAACAAAGGAAAATAGAGCGAGAGCAGAAAAAGACTGAAAAGGAAAATAAAGCGAAAGAAAAAAAATTGAACATTAAAACAAAAGCACATTACAAAAAAGTTAAGATCCCAGTACCTCAAACAGAAATATCCCCCGAAAATACATTCGATGAATCTGAAAGCAGCATACTTACTCAAGAAAATACAAACAACACCATAAATGAGTGTGATATATTGTATCCATCAGAAGAAGTAATACCAAAAAAAGTTAAAAGTACTGACACCAAGAATATACTTAAGAACACTACAAACTCGAATATACAAATCCCGGTTATGACAAATATCGAAATTGGTACTTATATAGTTGTCGAATTTAAAACAAATAAGAGAAACCGTTACTATGTGGGTGTCGTAGAAGAATGTGATTTAGGGACTGATTTTATAAAAGCAAAGTTTTTAAGAAAGAAGTCGAGTAAATTAGATAACTTAATATACTTTGTAGAACCGTCTACCGTTGATCTAACTGAGGTGGCCATTACTGACGTGAAAAAAAAATTAACTGCACCTCAAGTAGGCAGACGAGGGATGCTAAACTTCATTGAACCTAACTTTGATCTCAATTTATGTGAATAA
- Protein Sequence
- MAFKTERKERLYEQATLEKAVEEIRNNQISLSQASSTYNIPKGTLHNKVHGKTPLVCKKGPSTILRHEEESHIATWIINMAKVGYPVSHDDLKDTVAQLFEKRGQPDIKPGKKWFRLFLNRHPEITQRHAEIISKARASVTEVGIRKWFADLTNYMLEQNTEEILNCPERIFNLDETGVQLCPKSGAVLAPKNYRTMYTIASGQEKQCVTVLCNFSASGGIVPPFVVYPLQRISKEIAQSVPDEWGIGRSDSGWMTSATFLEYMREIFLPWLQLKNIQLPVILFVNGHKSHINIELHDFCVEHQIIVYCLHPNTTHIMQPCDVGIFGPLKAAWKNMACGLSPFNPDAVDYNKCISTRKDDISREVALQDYKTTISVIQKTISSQTLEKYKDCREQDKRLKSTLFLFWNKCMNKVDNMMLTQSNIDDSNTAINVSILDNPTNTQANHHKTNTQTNQGASTQTNHEIDTQTNQETNIQTNHEAYTKTNHEEDLSMTLGIDSIVEGLIDIENIPIDIQGCNVFLDDIPLEEYDKNTAETSSTNRIIQEDTASINGSHLIETNNQASIMKTANINPPDTPMQARKDASESTLTVEPMMDPVMTSTPKEAIPHTEQTYTDKTPDQNSSVLEESSDQSIYIGDLFKIPVEKKPVKRKFHTTSPMPLAITSKKFKEYIENKENDKKRKADEIKQRKIEREQKKTEKENKAKEKKLNIKTKAHYKKVKIPVPQTEISPENTFDESESSILTQENTNNTINECDILYPSEEVIPKKVKSTDTKNILKNTTNSNIQIPVMTNIEIGTYIVVEFKTNKRNRYYVGVVEECDLGTDFIKAKFLRKKSSKLDNLIYFVEPSTVDLTEVAITDVKKKLTAPQVGRRGMLNFIEPNFDLNLCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00156184;
- 90% Identity
- iTF_00156184;
- 80% Identity
- -