Basic Information

Insect: Archips xylosteana
Gene Symbol: lolal
Assembly: GCA_947563465.1
Location: OX387343.1:47887826-47898885[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.9e-16 5e-13 49.3 0.0 1 42 314 356 314 359 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.9e-16	5e-13	49.3	0.0	1	42	314	356	314	359	0.94

Sequence Information

Coding Sequence: ATGTCGCAGCAGTATAGTTTGCGGTGGAACAACCACCAGCCGAACTTTATCTCGATGTTCACGACGCTGCTGAACACACAGACGCTGGTCGATGTCACGCTGGCAGCGGAGGGGAAACACTTGCAGGCGCACAAGATTGTGCTGTCCGCTTGCAGTACTTACTTTCAGGCCTTATTTGTAGACAACCCATCTCAGCATCCGATTGTGATCCTAAAGGACGTCACATTCGCAGACTTGCGCACTATGGTCGACTTCATGTACTGCGGCGAGGTCAATGTCACCGAGGAACAGTTACCACAGGTACTAGACACAGCGAAGCACTTAAAAATCAAGGGTCTCACAGAGATGCCCGAGACCACGTCGCTAACCCGCTCCCAGGGCACGACAGCCGACATACAGTCCCAAGGGGACTCCCTGGACTCGAACCGGCACTCCGCATCGCCCGCCACCTCTCCGTCCACTAAGCGGAAAAGACGCAGAAAAAGCTCAACGGGCTCGACATCACTCAACATGGTGGGCGAGGATCAGCGGGAGGAGGGACACTCACATGATCCTGCGCGAGAGTCGGTCACACTCAGCAGCCTGCCGCAGCGCCGGCGGGAGTACGAAGACGGCGCGCCACAGAACGCTGACCCTCACATGAACGTGGAGCCTTTGCCGATGGAGGCGGGCGCGACGGGACTACCGCAAGGAGCGCAGTGGAGTATGATGGAGCACACGTACCCGCGCTACTCGAACGCCTGCCTCGGGCTGCCCCACGACCCCGCCATGTACATGGGGAACGTCATCAACCAGCACATGGAGGGGGAGATGGGGGAGTACGCACAAGCGGCCGGCGTCGCGGGCCCCAGCCCCGGCCCCTCCTGCGCCCCCGAACCCCACCCCACCCACGACCTACCGCCAGCCCAGCCGAAACGCCGCCGCGCCACAAACCCACAGTCCGAGGAAAACTTCCAGCGGGCCCTAGAAGCGGTACGCTTCGGCGGAATAGGCTTCTGCAAGGCCGCGCGCATGTTCGGCGTCAACAACCGAACGCTCTGGCTCGAATACAAGAAAAAAGGTTATCCTAACAACCGGCCGAGCATCAAGTCGCGCATCAAACGAGAACACACCACCCCGCCCCCAGAGCACAAGGAAGAAGCTCCACAACAAGAACAACAGATGGCGCTTATTTGCCCCCCGCACCCCGTCCCCGTCGGCTTCATTGACTCCCGCCCCCTCGATTTCCCCCTCCAAGGCGTCCCCCACAACTCGCCCCTCAACATTCTGGGGGTGAACTTCAATAACATGCAATAG
Protein Sequence: MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKIVLSACSTYFQALFVDNPSQHPIVILKDVTFADLRTMVDFMYCGEVNVTEEQLPQVLDTAKHLKIKGLTEMPETTSLTRSQGTTADIQSQGDSLDSNRHSASPATSPSTKRKRRRKSSTGSTSLNMVGEDQREEGHSHDPARESVTLSSLPQRRREYEDGAPQNADPHMNVEPLPMEAGATGLPQGAQWSMMEHTYPRYSNACLGLPHDPAMYMGNVINQHMEGEMGEYAQAAGVAGPSPGPSCAPEPHPTHDLPPAQPKRRRATNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKEEAPQQEQQMALICPPHPVPVGFIDSRPLDFPLQGVPHNSPLNILGVNFNNMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00156368; iTF_00772803; iTF_00772994; iTF_00008822; iTF_00009187; iTF_00462519; iTF_00462317; iTF_01463415; iTF_01463182; iTF_01135897; iTF_01135687; iTF_01134714; iTF_01134925; iTF_00010267; iTF_00009925; iTF_00342139; iTF_00342322; iTF_01464283; iTF_01464089; iTF_00021436; iTF_00021264; iTF_00325533; iTF_00325308; iTF_00155232; iTF_00155419;
90% Identity: iTF_01463415;
80% Identity: iTF_00156368;