Basic Information

Insect: Archips crataeganus
Gene Symbol: stc
Assembly: GCA_947859365.1
Location: OX402052.1:18234244-18256419[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.4 1.9e+04 -3.6 1.6 15 19 12 16 11 16 0.81

2 14 0.02 2.8e+02 2.3 1.5 2 10 44 52 44 52 0.93

3 14 6.8e-05 0.95 10.2 20.0 4 19 60 75 58 75 0.93

4 14 8.4e-07 0.012 16.3 14.4 1 18 111 128 111 129 0.95

5 14 1.2 1.6e+04 -3.4 1.5 8 11 134 137 133 138 0.86

6 14 0.00019 2.7 8.7 12.0 1 19 170 188 170 188 0.97

7 14 8.6e-06 0.12 13.0 11.8 1 19 229 251 229 251 0.87

8 14 2 2.8e+04 -4.6 2.2 6 10 281 285 281 285 0.94

9 14 0.0025 34 5.2 6.8 1 11 291 301 291 302 0.94

10 14 0.035 4.8e+02 1.5 0.6 4 10 306 312 305 312 0.92

11 14 5.3e-06 0.074 13.7 14.1 3 19 320 336 318 336 0.91

12 14 0.0011 15 6.3 11.5 9 18 382 391 376 392 0.92

13 14 4.1e-08 0.00057 20.4 13.2 1 17 428 446 428 452 0.83

14 14 0.00014 2 9.1 6.7 1 14 458 470 458 470 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.4	1.9e+04	-3.6	1.6	15	19	12	16	11	16	0.81
2	14	0.02	2.8e+02	2.3	1.5	2	10	44	52	44	52	0.93
3	14	6.8e-05	0.95	10.2	20.0	4	19	60	75	58	75	0.93
4	14	8.4e-07	0.012	16.3	14.4	1	18	111	128	111	129	0.95
5	14	1.2	1.6e+04	-3.4	1.5	8	11	134	137	133	138	0.86
6	14	0.00019	2.7	8.7	12.0	1	19	170	188	170	188	0.97
7	14	8.6e-06	0.12	13.0	11.8	1	19	229	251	229	251	0.87
8	14	2	2.8e+04	-4.6	2.2	6	10	281	285	281	285	0.94
9	14	0.0025	34	5.2	6.8	1	11	291	301	291	302	0.94
10	14	0.035	4.8e+02	1.5	0.6	4	10	306	312	305	312	0.92
11	14	5.3e-06	0.074	13.7	14.1	3	19	320	336	318	336	0.91
12	14	0.0011	15	6.3	11.5	9	18	382	391	376	392	0.92
13	14	4.1e-08	0.00057	20.4	13.2	1	17	428	446	428	452	0.83
14	14	0.00014	2	9.1	6.7	1	14	458	470	458	470	0.96

Sequence Information

Coding Sequence: ATGCTGTGTAACGTTACAGAGGGCAAATGGCGCTGCCCGGCCTGCCAGAACACGAGCGAAGAGATACCGAGCGAGTACCGCTGCATGTGCGGCGCAGTGCGCGCGCCCGACTACCAGCGCGGCGCCGGCGGCGCTCACACTTGCGGACAGGCGTGCCAGCGCCCGCGCTCGTGCCCGCACCCGTGCTCGCTGCCGTGCCACCCGGGGCCCTGCCCGCCCTGCCAGGCCACCGTCACCAGGCAATGCGGTTGCGGAGCGGAGACGCGTTCAGTCGTGTGCAGCAGCAAGCTGGCGCAGCTGTGTGGGCGCGTGTGCAACCGGCGGCTCGCGTGCGCCGCGCACCGCTGCCCGCAGCAGTGCCACGAGGGGCCGTGCGAGCCCTGCGCCAGCACCGTCGACCAGGTGTGCCACTGTCCGGCCGCGAAGTCCCGTTCGGTGCCGTGCACGGCTGAGACCGGCGGCAGCGCGTCGTGGTCGTGCGGCGCCGAGTGCTCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGAGCCGTGCCACGCGCCGCCCTGCGCGCGCTGCCGCCTGCTGCCCGCCGCCGTGCCCACGTGCCCGTGCGGCCGCACCAAGCTGGACCCAGAGGCGCGTAAAGTGTGCACGGACCCGGTGCCGCTCTGCGGGAACATCTGCGCCAAGCCGCTGCCGTGCGGGCCCGCCGGCGACAAACACTTCTGCAAGCTTGACTGCCACGAAGGTCCATGTCCCGTCTGTCCCGACAAGACCCCGCTGCCGTGTCGTTGCGGGCACTCCAACCGCGTGGTGCCGTGCGCCGATCTGCCGCAGATGTTGGACAACGTGTTCTGTCAGAAGAAGTGCACCAAGATGCTGTCGTGCGGGCGGCACCGCTGCCGCGCGTCGTGCTGCGCCGCCGCGTCGCACCGCTGCGCCGTGGTGTGCGGCCGCCTGCTGGCCTGCCAGCTGCACCGCTGCGAGCAGTACTGCCACACCGGCCACTGCGCGCCCTGCACCCGTGCCAGTTTCGAGGAGCTGACGTGCGAGTGCGGCGCCGAAGTGATTCTGCCGCCCGTGCCGTGCGGCACCAAGCGGCCCTTGTGCGTCGCGCCGTGCCGCCGCCCCCGCGCCTGCCAGCACCCCCCGCACCACTCCTGCCACGAGGGCGAGTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGCTGCCACGGCCAGCACGAGGAGCGCAAGACGATCCCGTGTTCGCAAGAAGATTTTTCTTGTGGACTGCCGTGCGGGAAACCGCTGCCCTGCGGAAAACACACCTGCCTAAAGATCTGTCATAAAGGGCCTTGTGACGCCGGCAAGTGCACTCAGCCGTGCAACGAGAAGCGGCCAAGCTGCGGGCACCCGTGCGCGGCGCCGTGCCACGCGGGGCAGCCGGGCGGGGGCGGGGCGGGGGGGCAGCCGGGCGGGGAGCCGCGCGCCTGCCCCAGCGCCGCGCCCTGCCGCAAGCTGGTGCGCGCCACCTGCCCCTGCGGCCGCCGCGCCGCCGAGCGCGCCTGCGCGGACAACGCGCGCGACCTGGCCAAAATAATCAGCGTACTGACAGCTTCCAAGATCCAAGAAGGTGGTTCCGTCGACCTATCCGAAGTTCAACGTCCCGCTTCTATGCTGAAAACTCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCGGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGACCACGTGCGCGCCACCGCCGCGCGCGAGCCCGGCTTCGCGCGCCTGGTGCACGACCGCCTCACCGACCTGGTGCAGCTGGCCAAGAAGTCGAAGCAGAAGACGCGCGCTCACTCGTTCCCGTCGATGAACTGGCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCAGTTCGGCTGCGAGTCTGTCGCGTACGACGCAGAGCCCAACCGGAACGTCGTCGCCACAGCCGACAAGGAAAAGTCATGGCTGCCGGCGATGAGCGTGCTCGAAGTGCTGGCGCGCGAGACCGGCAAGCGCAAGGTGCCGGGACCCGTGCTGCGCGCGCCCGCGCCCGCGCCCGCGCCCGCCGCCGCCGCCAAGTCGGGAAGCGGCTGGGCCACGCTGACGTCTACCAACGCGTGGGCCTCGCGAGCGCAGAAGAAGGCCGAGGACGCTCCCAAGATCGATTACTTTGATAACCCGCCTGACAACTAG
Protein Sequence: MLCNVTEGKWRCPACQNTSEEIPSEYRCMCGAVRAPDYQRGAGGAHTCGQACQRPRSCPHPCSLPCHPGPCPPCQATVTRQCGCGAETRSVVCSSKLAQLCGRVCNRRLACAAHRCPQQCHEGPCEPCASTVDQVCHCPAAKSRSVPCTAETGGSASWSCGAECSRVLACGAHVCREPCHAPPCARCRLLPAAVPTCPCGRTKLDPEARKVCTDPVPLCGNICAKPLPCGPAGDKHFCKLDCHEGPCPVCPDKTPLPCRCGHSNRVVPCADLPQMLDNVFCQKKCTKMLSCGRHRCRASCCAAASHRCAVVCGRLLACQLHRCEQYCHTGHCAPCTRASFEELTCECGAEVILPPVPCGTKRPLCVAPCRRPRACQHPPHHSCHEGECPPCVVLTAKRCHGQHEERKTIPCSQEDFSCGLPCGKPLPCGKHTCLKICHKGPCDAGKCTQPCNEKRPSCGHPCAAPCHAGQPGGGGAGGQPGGEPRACPSAAPCRKLVRATCPCGRRAAERACADNARDLAKIISVLTASKIQEGGSVDLSEVQRPASMLKTLECDDECRVEARTRRLALALQIRNPDVSAKLAPRYSDHVRATAAREPGFARLVHDRLTDLVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEQFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLARETGKRKVPGPVLRAPAPAPAPAAAAKSGSGWATLTSTNAWASRAQKKAEDAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -