Acra005417.1
Basic Information
- Insect
- Archips crataeganus
- Gene Symbol
- ZNF831
- Assembly
- GCA_947859365.1
- Location
- OX402074.1:10296922-10326123[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00025 0.017 16.2 0.6 1 23 261 283 261 283 0.98 2 16 6.6e-05 0.0045 18.0 2.1 1 23 290 312 290 312 0.98 3 16 0.13 9.1 7.6 0.7 1 23 316 338 316 338 0.96 4 16 0.00029 0.019 16.0 3.2 1 23 343 366 343 366 0.97 5 16 0.0012 0.078 14.1 0.2 2 23 372 394 371 394 0.95 6 16 0.42 28 6.0 0.1 3 19 405 421 402 424 0.89 7 16 9.7 6.6e+02 1.7 0.1 3 23 434 455 433 455 0.88 8 16 9.9 6.7e+02 1.7 0.3 12 23 537 548 536 548 0.92 9 16 0.19 13 7.1 1.1 1 21 554 574 554 575 0.95 10 16 0.19 13 7.1 1.1 1 21 627 647 627 648 0.95 11 16 0.19 13 7.1 1.1 1 21 737 757 737 758 0.95 12 16 0.19 13 7.1 1.1 1 21 807 827 807 828 0.95 13 16 0.19 13 7.1 1.1 1 21 877 897 877 898 0.95 14 16 0.19 13 7.1 1.1 1 21 947 967 947 968 0.95 15 16 0.041 2.8 9.2 2.0 1 23 1017 1040 1017 1040 0.97 16 16 0.71 48 5.3 0.1 2 23 1048 1069 1047 1069 0.90
Sequence Information
- Coding Sequence
- ATGGAAAAATCTACAAAATCCTCTTCTGAATTGAGGTGTTGCCGTGGTTGTCTCGCGACCGATGTTAAATTGTTTGATATACACAAAAACCAGCTTGCTGAGGCTTTCGGATATATTACAGGATATCCAGTGGTACCCCAGGATGGATTCCCGCAATGGTTATGTGGAGTGTGCCGCGTCCTGCTGGCCAAGAGCACAGCGTTCCGAGAGCGCTGCCGGCGCGCGCATGACTGCTTTCTGCAGACACTAGATCATAAAACCATGGAGTACATAGAAACCATAGATCGCTTCTCAAACAATCTCGTGTTCCAATTGTCTCAAACTCACGTCGAAGTCACTGACATGAGTATCTGTCCTCTTGAACTTAAAGATGAACCCTCTGTAGTTGTTAACGAAACCATATTTAAAGACGAATTGGACGCGTTCGGTTTAGACATCGATGAAGATAGCTCACCCATAGATGATCGAGAATCAATTGATGATAATACAGATGAAGTCAAAGAAATAGGTAATAAAATAAAAATAGAACAAGTGCTAATACCAACTGATAAGGTCGAGGTAAAAAGAAGGCCAACAAGGAAGAGGAAGGTGGAGTTGAAGAGCAAAAAGCAAGAGCTAAAGAAAAGAAGGATCCTAGCTCCGTCCCCGACCGAGTTCCAGCCTAATTTCGACGTTGCGGCGCTCGAAAAAGAGTTGAATGTCGATATTGAAATTCTTAATAAGGAGCAGCAGTTAGCAGACTGGAGACAGTTCAGCGCCAGCAAGAAGACGCCAGCCGCGTTCCCGTGCCAGGTCTGCGGGAAGGGGTTCGACCACCCCACTCCTTACAAGAACCACCTGTTGAGGCACAGTCCGAGCGCCGGGCGGTTCGAGTGTGAGGTGTGCGGGGTTCGGTTCCGGCGGCGCTCCCAGCGGCGCCTGCACCGGCGCCGGCACGCGCTGCGGTTCGTCTGCCGGGACTGCAAGTTCGTCACCCGAGACAAGAATCAGGCGAAGCTGCATTTAGGGTCTCACGAAGGCCACAAGTTCCAGTGCAAGCACTGCGAGAAGAATTTTGTCAAGCGTTCGTCGTACCTGTCGCACGTGCGGCTGGCGCATGCGGCAGAGAACGTGCCGTGCGGCGAATGCGGCGAGACGTTCGTCAGCCCGCTCGGCCTCACTCATCATTATAGCAAGACGCACAAGGCACAGAAAGCTGCGTCTAAATGCGCGTGCGCGTCGTGCGGCGCCGCGTTCGACAGCGCGGACGCGCTCCATGCGCACGAGGCTATTGGCCGCTGCGATCCAGAGGCGAGGCCTTGCGCGGCGTGCGGGGCTTCGCTGGCCACAGACGAAGCCCTACGGACGCACACAGAGGAATGCCACAAGGAAGAGTTCAAGTGCACCGAGTGCCCGCTGCTGTTCGCCGGCGACGGGCCCCGCGAGACGCATTACTGGCGTGTGCACGCCCTCGTCCGCGCCCGGCAGCGCCCCCCGCGCCGCCCCCCGCGCCCCGCCTCGCGCGTGTGCCCGCACTGCGGCCGGCTGTGCCAGTTTACTGAATTTTACTATGGTGCGGATATATCCGTCATTGGCGCCCAAAAGGTGAACGTGAAGGTTTGTCCCCAGAACTCGTCCCTCCTCGAGGAGCACTTGCGCATCCACACGGGGGAGAAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTCAGTACAGAGGCGCTTCGCTACCTCCACACGGGGAGAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTCAGTACAGAGGCGCTTCGCTACCTCCACACGGGGGAGAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTCAGTACAGAGGCGCTTCGCTACCTCCACACGGGGGAGAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTCAGTACAGAGGCGCTTCGCTACCTCCACACGGGGGAGAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTCAGTACAGAGGCGCTTCGCTACCTCCACACGGGGGAGAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGAGGCGCTTCGCTACCTCCACACGGGGAGATTCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTGAGTACAGAGGCGCTTCGCTACCTCCACACGGGGAGATTCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGAGGCGCTTCGCTACCTCCACACGGGGAGATTCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTGAGTACAGAGGCGCTTCGCTACCTCCACACGGGGAGATTCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGAGGCGCTTCGCTACCTCCACACGGGGAGATTCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTGAGTACAGAGGCGCTTCGCTACCTCCACACGGGGAGATTCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGAGGCGCTTCGCTACCTCCACACGGGGGAGAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTGAGTACAGAGGCGCTTCGCTACCTCCACACGGGGGAGAGCCGTACGCGTGCGCGGACTGCGCGCTGCGGTTCAACTGCCGCGCCAACCTGCAGCGGCACCACCGCGTGGTGCACCTCGGGCAGCGTCCGATGGTGAAGTGCGGCGAGTGCGGCAAGCAGCTGGGTTCCGCCTCGCTCGCCACACACGTCAAGTACGTGCACCGCAAGATGCCGCAGAAGCCGCGCCACAGGAACACGCCAGTGGCCTCTACACGCTAA
- Protein Sequence
- MEKSTKSSSELRCCRGCLATDVKLFDIHKNQLAEAFGYITGYPVVPQDGFPQWLCGVCRVLLAKSTAFRERCRRAHDCFLQTLDHKTMEYIETIDRFSNNLVFQLSQTHVEVTDMSICPLELKDEPSVVVNETIFKDELDAFGLDIDEDSSPIDDRESIDDNTDEVKEIGNKIKIEQVLIPTDKVEVKRRPTRKRKVELKSKKQELKKRRILAPSPTEFQPNFDVAALEKELNVDIEILNKEQQLADWRQFSASKKTPAAFPCQVCGKGFDHPTPYKNHLLRHSPSAGRFECEVCGVRFRRRSQRRLHRRRHALRFVCRDCKFVTRDKNQAKLHLGSHEGHKFQCKHCEKNFVKRSSYLSHVRLAHAAENVPCGECGETFVSPLGLTHHYSKTHKAQKAASKCACASCGAAFDSADALHAHEAIGRCDPEARPCAACGASLATDEALRTHTEECHKEEFKCTECPLLFAGDGPRETHYWRVHALVRARQRPPRRPPRPASRVCPHCGRLCQFTEFYYGADISVIGAQKVNVKVCPQNSSLLEEHLRIHTGEKPYACADCALRFNCRANLQRHHRVVSTEALRYLHTGRAVRVRGLRAAVQLPRQPAAAPPRGQYRGASLPPHGGEPYACADCALRFNCRANLQRHHRVVSTEALRYLHTGESRTRARTARCGSTAAPTCSGTTAWSVQRRFATSTRGRAVRVRGLRAAVQLPRQPAAAPPRGQYRGASLPPHGGEPYACADCALRFNCRANLQRHHRVRRFATSTRGDSVRVRGLRAAVQLPRQPAAAPPRGEYRGASLPPHGEIPYACADCALRFNCRANLQRHHRVRRFATSTRGDSVRVRGLRAAVQLPRQPAAAPPRGEYRGASLPPHGEIPYACADCALRFNCRANLQRHHRVRRFATSTRGDSVRVRGLRAAVQLPRQPAAAPPRGEYRGASLPPHGEIPYACADCALRFNCRANLQRHHRVRRFATSTRGRAVRVRGLRAAVQLPRQPAAAPPRGEYRGASLPPHGGEPYACADCALRFNCRANLQRHHRVVHLGQRPMVKCGECGKQLGSASLATHVKYVHRKMPQKPRHRNTPVASTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -