Acra014835.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Archips crataeganus
Gene Symbol
jarid2b
Assembly
GCA_947859365.1
Location
OX402045.1:3509471-3591297[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-18 1.6e-14 54.6 0.0 6 88 668 747 664 748 0.92

Sequence Information

Coding Sequence
ATGAGACTAGTGCAGCGCAAATTCGCCCAGGGCGTGCCAATTCCGCCCAGTATCAGCGTAGCTCCTCCCGTCCCGGAGCGGAAGCCAGACAAGGATGACCAGAAAACCGTGTACCACAACGGCATGTCTGCAAGGAGCTTGCTGGACATTGTTGCTCTGCAAAACGTCCATAGACACAAGCAGCCTATGGTGTTGCTTGAGCGTCTACGCGAGGACGAAATCCCCGTGGTGGTCCCCACTTTAAAGGTGAAGAAGAGACGGCTTGCCTTCAAAGCGAAGAAGAACAACAGCATGTGCCTCCGGCCTCGGGAAAAGCCTAAGCCAGAAGCACGTGTCCTCAAGAGGAAGTCTGTGGAGGTGACTAAGTCTCCGAGTAAGAAGCGCCCCTGCGTGAACCGTGAAGACAAGTCCGAAGATGATATGCCCTTGCTGTACTTATCTAGCACAGCCAAAGAAACACCACCAGATAAAAAGAAGCAGGAGCGTAGCTTCACCTTCAAATGTCCATCGACCACCAGCATCGTCAGTCGCAAGTTGAAACGCAACGGCAGGAGGATATCGTTCCTTTCTGGAGGTCGTCCTCTGCCGAGCCCGTTGCCGAGCCCTATTCCCAGCCCGGTGCCGTTCAAGACAATAGTGCGCCGCTCGTCGCGCCGCGTCGGCTTGGTCGCGCCGCCTTCGCCCGCCGCCCGCGCCCCGCGCCGCTTGCGCAACAACTCAGTGAAACCAAAAAGGAGAATAATGCCGCCGTGGCTCAACACCACAGTCAAAGGCATAAATATACTTTCGAGCTTAGAGAAGATTTCGCCAGAGAGTGAAAGTACAGTATCAGAGCCAGCAAAAACAGCAGAAACCGGTAAACTTACCCCTGCGATGCCGCCACCGCCGCCCGCCCGCGCCGCTCGTCGCATATTTACGTCCAAAAACGATGATGATCAATCTCCTCTCCCAGAATCTAAAAGTACGATCGCGGAGCCAGCAGAACCAGCAGCAATGGATGAACCTTCGGCCATGGAGGTTGTGCCTCCGCCTATAAACGTAGATGACGACGATCACTCCGACATTATAAGGCTGCGTTATGATTCGGACACAGATGTAGATGCGGCTATCGCGACGCCGCAAGCCGTCGACCCGGACAACTGTCCTTCGAACAGCTACAACTCGGTCCAAGATGTGGTGGTCGCCGCCAACGCCAAATGCCAGTTCTTGGCTGCACGGTGCCGAAATTGCCGCGGCTGCGGGATCGTCGATAAGATTATACAGCTGACACGACTGATGCAGCCCGCGTGTATAACGGCAGGCGACGTGTACGATTTCAATGCGGAACTGGTGGAGGCGATCAGTCCGTCCCTGTCCTGCCTCCGCAACCAGAGCAGGCAGGCGCGGGCGCTCGAGGAGGAGAGCCACCTGTTCATGGACCTGCTGCCTCAGAACAGCCAGCATATTATACAGATAACACTGAAACGCACAGCGGAAAGCCAGTTCATTTCAAAGGCTTGGATCGTCAACCGCGAAGTCATGGCGAACACGCCTCAGCCCAGTCTGATAGAGCACGAGAACCTTCTCGACCGCCTGCTGGAATGCCTCTCGGCGGCGTCACAGGGCAGTCAGGAGGGGGAGGAGCCCCAGCCGTCCACCAGCAGGGGTTTCGGGCCCCCGGATGTGATCAGGCCGGCGTTGCGGGCGTGCACCGTGAACCTCTGGAGGCAGTTCCCGGCCCCACCAGAATCTTGCTCAGACGTCGATGAGGTGCGGGAGCTGTTGACTGATTCCCGGAAGGTGCTCGATGCCCCGGTCTTTTATCCCACCGAGGAAGAATTCACGGACCCGATAGGCTACTACGAGAAAATCGCCCCGACGGCCTCCAAGTTCGGCCTCTGCAAGATAGTGGCGCCCGCCGGCTTCGCCCCGCCCTGCGTGATGAATGAGCAGTTCCGGTTCGCCGTGATCTACCAGTACATATCGAAGCTGTACTCCCGCTGGGGCCCAGCGTCGAGGGAACTCGCGGCCATCAAGGCCCATATGAAGACGCAGAGCGTCGTGTTTCCGCGCTCGCCGCTGTTGGACGGCAGCGAAGTGAACCTGCCGAAGTTGCATCACTCGGTGCAACGCAACGGTGGCCCCACCAACGTGATACAGCGGAAACGCTGGGGCCGGGTGGCCGAGGAGATGAAGCTCACGAAGCTCCAGAACCCCGAGAAGAAGCTGGACCAGCTGTTCATGCGGTACCTGCTCCCGTATACCATGCTGTCGAACCAGGAGCGTCAGAAGAAAATGGCCGAAGTGGAGAAGTGCTGGACGGTCAAGTACCAGAAGATGCTGGAGCGGGCGCGCAACCCGTTCCACCGGCAGAAGCGGCTGCTCGGCGAGTCGGACTCCTCCGAGGACGAGGCGGATGATAACGACACGGCCGGTGCCCTGGACGAGGCCGAGGACTGCATCGTGCAGGGACGCATCATGAACCTGGCCACGTTCAAGAAGATAGCAACGTCCCTCATGGAGGCTCACTTCGAACCGGGCACAGCGCCCGCGGCGTCAGCCGTCGAGACGGCGTACTGGCGAGCCGTGTTGCACGGCACAGAACACATCGTAGCCAACACGGCGTCCATAGACACCGGCGAGGAGGGGTACGGGTTCCCTAAGGACCCGGCCGCCAGCTACGGAGACCACCCGTGGAACTTGAAGAGACTGAGCCAGAATCCAGGCAACGTGCTCCGGTTCCTGGGCCCAGTGTTGGGCGTGACGGTGCCCACTCTGCACCTCGGCATGCTATTCAGCACGTCCTGTTGGCACCGCGACCCCCATGGCCTGCCCTGGACAGAATTCATGCACAGCGGCCCCGAGAAGATATGGTATGGCATCCCGAGCGGCCAAAGCGCGAACTTCCGCCGCGCGGTCGAGACCCTCTGCCCGGCGTACTGCCAGAGCAAGTCGATATGGCTCGCGTCCGACATCGCCATGATACCCCCGGACATCCTTTCTGAGCACAATGTGACGCTCTCGCGCGCCACGCAGAGGCCCGGGGAGTACATCATGGTGTTCCCGGAGGCGCACTCGTGCTCGATCACCACGGGGTTCGCCATATCGGAGAGCGTGTACTTCGCGTCCAATTCTTGGCTCGACAACGTCTACCAGCTGTTCCAGGAGCTGCGCAACAGCTGCGAGCCGACCATGTTCTCGCTGGAGCAGCTGCTGCTGAGCGGCGGCGGCGGCGGCGGCTGCGACCGCGCGGCGCCGCTGCTGCCGGCCGTGCTGGCCACGCTCGTGGGCGAGGAGCTGGCGCACCGGCGCTCCCTGGAGGGGCGCGGGCTGCAGTTGGTCGTGCAAATCAGTGAGCCGGACGAGGAATCTCAGTCGCAGGCGTGGACGGCGCGCAACCAAGACGAATGCGAATTCTGCCGGTCGACCCTCTACTTCTCGAAGGTAATCGGCCTGACGGGGAAGAAGTCTCTTGTGTGCCCCGAGCACGCGATCCGTTTGCTCGACACGCAAAAGTACAAGGAAGCCAACCCGAAGACGCTCGGCTTCGTGACCCGGTACTCGTCCAAGATGCTCCAAGAGATGTGGGACAGGCTCGAGCGGCGCGGCGAGGACGAGAACGCACCAGCCGCCAACAAATAG
Protein Sequence
MRLVQRKFAQGVPIPPSISVAPPVPERKPDKDDQKTVYHNGMSARSLLDIVALQNVHRHKQPMVLLERLREDEIPVVVPTLKVKKRRLAFKAKKNNSMCLRPREKPKPEARVLKRKSVEVTKSPSKKRPCVNREDKSEDDMPLLYLSSTAKETPPDKKKQERSFTFKCPSTTSIVSRKLKRNGRRISFLSGGRPLPSPLPSPIPSPVPFKTIVRRSSRRVGLVAPPSPAARAPRRLRNNSVKPKRRIMPPWLNTTVKGINILSSLEKISPESESTVSEPAKTAETGKLTPAMPPPPPARAARRIFTSKNDDDQSPLPESKSTIAEPAEPAAMDEPSAMEVVPPPINVDDDDHSDIIRLRYDSDTDVDAAIATPQAVDPDNCPSNSYNSVQDVVVAANAKCQFLAARCRNCRGCGIVDKIIQLTRLMQPACITAGDVYDFNAELVEAISPSLSCLRNQSRQARALEEESHLFMDLLPQNSQHIIQITLKRTAESQFISKAWIVNREVMANTPQPSLIEHENLLDRLLECLSAASQGSQEGEEPQPSTSRGFGPPDVIRPALRACTVNLWRQFPAPPESCSDVDEVRELLTDSRKVLDAPVFYPTEEEFTDPIGYYEKIAPTASKFGLCKIVAPAGFAPPCVMNEQFRFAVIYQYISKLYSRWGPASRELAAIKAHMKTQSVVFPRSPLLDGSEVNLPKLHHSVQRNGGPTNVIQRKRWGRVAEEMKLTKLQNPEKKLDQLFMRYLLPYTMLSNQERQKKMAEVEKCWTVKYQKMLERARNPFHRQKRLLGESDSSEDEADDNDTAGALDEAEDCIVQGRIMNLATFKKIATSLMEAHFEPGTAPAASAVETAYWRAVLHGTEHIVANTASIDTGEEGYGFPKDPAASYGDHPWNLKRLSQNPGNVLRFLGPVLGVTVPTLHLGMLFSTSCWHRDPHGLPWTEFMHSGPEKIWYGIPSGQSANFRRAVETLCPAYCQSKSIWLASDIAMIPPDILSEHNVTLSRATQRPGEYIMVFPEAHSCSITTGFAISESVYFASNSWLDNVYQLFQELRNSCEPTMFSLEQLLLSGGGGGGCDRAAPLLPAVLATLVGEELAHRRSLEGRGLQLVVQISEPDEESQSQAWTARNQDECEFCRSTLYFSKVIGLTGKKSLVCPEHAIRLLDTQKYKEANPKTLGFVTRYSSKMLQEMWDRLERRGEDENAPAANK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-