Adep028444.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- stc
- Assembly
- GCA_963662175.1
- Location
- OY759220.1:11015825-11040783[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.92 2.3e+04 -3.0 1.7 15 18 313 316 312 317 0.81 2 17 1.9 4.8e+04 -4.1 1.6 15 19 340 344 339 344 0.81 3 17 0.012 3.1e+02 2.9 0.3 4 10 373 379 372 380 0.97 4 17 1.9e-05 0.46 12.0 17.5 4 19 387 402 385 402 0.94 5 17 0.55 1.4e+04 -2.3 0.6 5 10 427 432 427 432 0.90 6 17 2.9e-07 0.0072 17.7 13.6 1 19 438 456 438 456 0.91 7 17 2 5e+04 -7.3 5.4 8 13 461 466 457 466 0.76 8 17 2.6e-07 0.0065 17.9 15.5 1 19 497 515 497 515 0.98 9 17 1.8e-06 0.044 15.2 15.4 1 19 556 578 556 578 0.89 10 17 0.0012 30 6.2 7.9 1 11 618 628 618 630 0.96 11 17 1.2 3e+04 -3.4 0.8 4 10 633 639 632 639 0.72 12 17 7.6e-11 1.9e-06 29.2 12.3 1 18 645 662 645 663 0.97 13 17 1.6 4e+04 -3.8 0.6 6 10 692 696 691 697 0.72 14 17 2 5e+04 -5.0 15.2 1 19 702 720 702 720 0.87 15 17 0.28 6.9e+03 -1.4 0.3 9 14 738 743 736 748 0.84 16 17 6.3e-06 0.16 13.5 14.9 1 16 756 770 756 781 0.83 17 17 0.0019 48 5.5 15.5 1 18 787 806 787 807 0.92
Sequence Information
- Coding Sequence
- ATGTCCCATTGGGACAGAAATCAGGGAAGTGGTGGGTCGTATCAGGGCTACAACAGATTATATCCATCGGCCCAACCACAACAAGGAGCTCCCTACTATGGAAACTACTATCAGCAACAACCTTTCTTCAATCAGTGCTATACAGGACCACAGGAATCATATCAAAATGGATATCGTGGAAATCCAACTTCCGCGGAGGAATTTTTCCGATTGTTCCAGGAACAAGAGCATCGCCAACAAGAACAACAGCAACAATCTGTCAGTTTAGACTATGGCTCCATATCATCCGGCTATCTTCCGACTATGGTTTTCCCTTCTTCAAACCCAAATGCAACTACAGGACCCACAGTTGGAGCTGAGAACCCGAGCCAAGCTAAAAGAGTTGGATACGAAGGTGGTGGGAGACGAGGAGGAGGAGGGGGTCGGAGTGGGGGAACAGGACGGACCTTAGGAGGAGGAGCAGTGCCCAAACAGAACAACTACAACAACCGGAGGAACAACTATGGCAACAACATGTTCAACAACACGAGGAGAGGACAGCAACAGGGACAGCCTCAACATCAGCAGCCAAACTGGGCAGCTATTCCAAACGATGACATTATTGGTCCTCATCTGACTCCGGATGGTGTAGCGAAGGGAGGTGTTGGCGTGGAGGACGCTAAGGGAGAAGGAAAGAAGAGCAAGAACTATTCTCACAATCAGAGGAACTTCGGCGGGAGATACAACAACGGCACTCAATATCAgcgAGAAAATAATGGCATGATGAAGAAAGATTGGCGTGCCAAGAACAAAAATATCTATAATGGAGTTGGAAAAGAAGGTTGTGGTGGGGGCGAAGAGAGCCAGCGAGACCGACTCACCTCACAGCTCTACTCAGGCACCCTCGAGTGTCTGGTATGCTGCGAGAGGATGCGGCAGCCGGACTCGGTCTGGTCCTGTCCCTCCTGTCATCATGTGCTCCATCTCCGGTGCACCGTCAAGTGGGCCTCTTCCAGTCGGTCTGATACTGGCTGGAGATGTCCTGCCTGTCAGAATGTTACAGAAGCTATACCGACCCAGTATAAATGTATGTGCGGCAAAGTTGTCGATCCTCACTGGGTTCGTGGAGAGACGCCTCACACTTGTGGCCAGGTGTGTGGTAAAGACCGTGGCTGCCCCCACCCCTGTACACTCCTCTGCCATCCTGGACCCTGTCCTCCCTGTTCTGCCAATATAGACAGATATTGTGGGTGTGGGCGAACCAAGCAGGTGGTGCAGTGTTCTTCGAGAGTGGAGCTGAACTGTGAAGCAGTCTGTGAGAAACCTCTCAACTGTCGCAAGCACAAGTGCACCGAGATCTGTCATCAGGGACCCTGCGCTCCCTGCACGCACACAGTTCATCAGAAGTGCCACTGCGGTGGACAGGAGCGGGACGTGGCCTGTGATGGAAGCTCCTCCTCCGACTCTTCTTCCTTCGCTTGCGGGGCTGACTGTGCCCGGACCCTCTCCTGTGGGGCCCACATCTGCCCCCTCTCCTGTCACCCTGGCCCCTGTCCTCCCTGTTCCTTGGACCCTAGCCTAGTCACCACATGTCCTTGTGGCAAGTCCGTTATCCCACCTGGCTCACGCAAACTCTGTACTGATCCACTACCTCTTTGTGGAGCCCAGTGTGGCAAGCTGTTGCGTTGTGGTCCTCCTGGTAAGCGGCATTTGTGTAAGAACAAGTGTCACAGGGGGGACTGTCCGCCGTGTCCTGAGTGGACCCCCGTGGTGTGTCGGTGTGGGGCCATGACAAAGGAGGTGGCCTGTGCTGCCCTGGTCGCCAGTCCCGGAGACACATGCTGCTCCAAGCGGTGCACCAAGAAACGAAGCTGTGGTAAGCACAAATGCAATCAGGCATGTTGCATCGAGATAGACCACGTGTGTCCACTGCCATGCAACAAGATGTTGAGCTGTGGCCGACATAGGTGCCAGGAGCTGTGTCATCGGGGCAACTGTAGACCATGTCTAGCTGCAAGTTTCTCAGAACTGAGTTGCGAGTGCGGGAAGGCAGTGATCTACCCACCAGTGCCATGCGGGACCCGACCTCCGGAGTGTAACGCCCCCTGTTCCAGGAACCACCCCTGTGGCCACCCTCCCACACATCTCTGTCATTCTCAGCCGGAGTGTCCCCCCTGCTCACATCTCACCACCAGATACTGCTACGGCGCACATGAGTTACGAAAGACTGTACCTTGTCACATGGGTGAGTTCTCATGTGGTCGTAATTGTGGTAAGAAACTAGACTGTGGTCACAGCTGTAACCGACTATGTCACCCGGGCCCCTGCCTCTCTGAGGGAACCAAGTGCACCCAGCCCTGCCCTGTAGCTCGGCCTTCTTGTGGTCATCCCTGTGCCGCCCCTTGCCATCCGGACGGCCTCTGTCAGCCCTCACCCTGCCAGGCCAAGgTGATAGTGAAGTCTCGCCTCCAAAATGGCGATGTTCGTCTTGGCAAGACGGTCGATCTAAGGTCTCCAGCCTCCAAACCTGCCCTCAAACTGGAGTGTACGGATGAATGCAAACTAGAAGAGAGGAATCTCCGGCTGGCCATCGGACTTCAGATCTCCAACCCAGACCTCTCCTCCAAGCTCAGTCCTCGCTACTCTTCCTTCCTTCTTCAGTGGGCCAAAAAGGATCCTAAATTTGCTCAGAATGTTCACGCCAAACTCACCGAAGTAGTTCATCTCGCCAAAACTtcaaaGCAGAAAAGTCGGAGTTACTCTTTCCCCTCGATGAAAGCTGAAAAACGTCAGTTTATTCACGAGTACAGCGAACACTTTGGCGTTGAAAGTGTTGCATACGACGCCGAGCCTAATAGAAACGTTGTAGCCACAGCTTATAAGGACAAAtcGTGGCTTCCAAGTTATTCCGTTTTGGAGATGTTGGAGAGAGCCGCTGGGAAGAGAAAAGTTCCAACCCTTCTGCCATCCTTGAAGAAGGATCTCACCAAGGAGGACAGTACCATGGTTCCAGTCCGACCCCGGCCCTCCAGATCAGACAGTAGCACAGATCCCAAGCAGACCTCTTCAGAAGACCCCTCTCAACCCCATCTCGAGCCACCCCCCATCGACTACTTTGACTATGTCAATCCCACATCATAA
- Protein Sequence
- MSHWDRNQGSGGSYQGYNRLYPSAQPQQGAPYYGNYYQQQPFFNQCYTGPQESYQNGYRGNPTSAEEFFRLFQEQEHRQQEQQQQSVSLDYGSISSGYLPTMVFPSSNPNATTGPTVGAENPSQAKRVGYEGGGRRGGGGGRSGGTGRTLGGGAVPKQNNYNNRRNNYGNNMFNNTRRGQQQGQPQHQQPNWAAIPNDDIIGPHLTPDGVAKGGVGVEDAKGEGKKSKNYSHNQRNFGGRYNNGTQYQRENNGMMKKDWRAKNKNIYNGVGKEGCGGGEESQRDRLTSQLYSGTLECLVCCERMRQPDSVWSCPSCHHVLHLRCTVKWASSSRSDTGWRCPACQNVTEAIPTQYKCMCGKVVDPHWVRGETPHTCGQVCGKDRGCPHPCTLLCHPGPCPPCSANIDRYCGCGRTKQVVQCSSRVELNCEAVCEKPLNCRKHKCTEICHQGPCAPCTHTVHQKCHCGGQERDVACDGSSSSDSSSFACGADCARTLSCGAHICPLSCHPGPCPPCSLDPSLVTTCPCGKSVIPPGSRKLCTDPLPLCGAQCGKLLRCGPPGKRHLCKNKCHRGDCPPCPEWTPVVCRCGAMTKEVACAALVASPGDTCCSKRCTKKRSCGKHKCNQACCIEIDHVCPLPCNKMLSCGRHRCQELCHRGNCRPCLAASFSELSCECGKAVIYPPVPCGTRPPECNAPCSRNHPCGHPPTHLCHSQPECPPCSHLTTRYCYGAHELRKTVPCHMGEFSCGRNCGKKLDCGHSCNRLCHPGPCLSEGTKCTQPCPVARPSCGHPCAAPCHPDGLCQPSPCQAKVIVKSRLQNGDVRLGKTVDLRSPASKPALKLECTDECKLEERNLRLAIGLQISNPDLSSKLSPRYSSFLLQWAKKDPKFAQNVHAKLTEVVHLAKTSKQKSRSYSFPSMKAEKRQFIHEYSEHFGVESVAYDAEPNRNVVATAYKDKSWLPSYSVLEMLERAAGKRKVPTLLPSLKKDLTKEDSTMVPVRPRPSRSDSSTDPKQTSSEDPSQPHLEPPPIDYFDYVNPTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -