Basic Information

Insect: Aradus depressus
Gene Symbol: -
Assembly: GCA_963662175.1
Location: OY759221.1:19316288-19325898[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0018 0.31 13.0 2.7 2 23 118 141 117 141 0.91

2 15 0.00021 0.036 15.9 1.8 2 23 197 220 196 220 0.91

3 15 0.11 20 7.3 1.1 1 23 240 264 240 264 0.97

4 15 0.022 3.8 9.6 4.5 1 20 468 487 468 488 0.96

5 15 0.083 14 7.7 1.8 3 23 521 542 519 542 0.95

6 15 4.8e-05 0.0084 17.9 0.5 1 23 575 597 575 597 0.98

7 15 0.00075 0.13 14.2 5.5 1 23 691 713 691 713 0.98

8 15 0.12 21 7.2 5.0 3 22 724 743 723 743 0.96

9 15 0.025 4.4 9.3 6.4 1 23 756 779 756 779 0.96

10 15 0.0023 0.4 12.6 0.5 1 20 835 854 835 858 0.95

11 15 0.029 5.1 9.2 3.4 2 20 1033 1051 1032 1053 0.95

12 15 0.18 31 6.7 0.1 3 21 1128 1146 1127 1147 0.93

13 15 2.4 4.2e+02 3.1 0.3 2 12 1160 1170 1159 1175 0.86

14 15 0.041 7.1 8.7 0.3 1 23 1212 1234 1212 1234 0.94

15 15 0.0031 0.54 12.2 4.4 1 23 1343 1365 1343 1365 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0018	0.31	13.0	2.7	2	23	118	141	117	141	0.91
2	15	0.00021	0.036	15.9	1.8	2	23	197	220	196	220	0.91
3	15	0.11	20	7.3	1.1	1	23	240	264	240	264	0.97
4	15	0.022	3.8	9.6	4.5	1	20	468	487	468	488	0.96
5	15	0.083	14	7.7	1.8	3	23	521	542	519	542	0.95
6	15	4.8e-05	0.0084	17.9	0.5	1	23	575	597	575	597	0.98
7	15	0.00075	0.13	14.2	5.5	1	23	691	713	691	713	0.98
8	15	0.12	21	7.2	5.0	3	22	724	743	723	743	0.96
9	15	0.025	4.4	9.3	6.4	1	23	756	779	756	779	0.96
10	15	0.0023	0.4	12.6	0.5	1	20	835	854	835	858	0.95
11	15	0.029	5.1	9.2	3.4	2	20	1033	1051	1032	1053	0.95
12	15	0.18	31	6.7	0.1	3	21	1128	1146	1127	1147	0.93
13	15	2.4	4.2e+02	3.1	0.3	2	12	1160	1170	1159	1175	0.86
14	15	0.041	7.1	8.7	0.3	1	23	1212	1234	1212	1234	0.94
15	15	0.0031	0.54	12.2	4.4	1	23	1343	1365	1343	1365	0.97

Sequence Information

Coding Sequence: ATGCATGTTGCATCGTGTCGTACAGGTGTATGGATACATGCTGCAACTCCATGGTGCATCGTGTCGTACAGGTGTATAGATACATGGTGCATCGTGTCGTACAGGTGTATGGATACATGGTGCATCGTGTCGTACAGGTGTATGGATACATGCTGCAACGCCATGGTGCTTCGTGTCGTACAGATCTGTTATATTAAAGAGGAGCCTGCAGATCCTGATTCAGCTTCAGGTCCAAGAAAAGTCAGGGTTAAGTCCGAGTTCCATATTGCCGAAGAAACCCAACCACAGGATGAAGGTGATCATTTGGATGGCGACTACAGTGAGCAGACACCTGGAGGACACGAAACACTGAAGTGTCTAACATGCAATCGTAGTTACTCGTCGTTTTCCGCACTTTCTAAACATATGCACACACGGGTTCATTTGCATAATGTGAAAGTAAGCAAAAGCGGTGGCGTGCTATCCTGTGAAGAAGAAGAGCTTCCAAGTCCTCCCGAAACTTTAAGACCCAGAACTACCTTTCCCGTTTATAATCCGTCTATGTTTGCTGATCCAGTCTTCCCTTCAGTATCTCGGCAGAAAAAACTAAGGTGTAGAATTTGTGGTCTTGTGTTTAGATTTCCAGCTGAGTTGCGGCGACACCTTTGCACGAAGAAACATCGAACAAATGAAAGAATTGCAGAACGTGGTCTTGCCTATGGAGGTAATAAACATCTTTTTATGTGTCCCATGGGTAACTgcaatttttcatgtaccaaaGGTGTTAAACTCTTGTCTCATATGAGAGCACACGGGTTATCTGAACCTAGATCTGAAGGTGGCCAAAATGCCATGTTTAACCGACCGGAGTCTTATTTTGCATTTGATAAACCTATTCGACAGCCTTTTGATGACGAAGATAGACAATTTGACCAATTCAATGCAAGAGTTGGACACATTAATAGACAGTATGATGAGAGGCAGTTTGAGAGTATTGATGAGAGACCCACTGTCAGGCAATATGAACAAGATAGACCTTTTGAACTTGCCAGTAGCAGTTCCGGAACGTACGGTGAAGATAGAAGATTTGAACAGGCTTATGCAAGACCAGGTGGGTTCAATAGACCATTAGAACGAGATGGTAGACGCTTTGCAGATCAGTCGGGCCAGATCAGTCGACCCTATGGAGAGGATAGGCAGTTTGAGCAAGTCACTGCAAGAGAAAGACCATTCGGAGAAGATCGTAGGTTTGAACAAGCTGGCAACAGCAAGTTTGAAGGAGACAATTTCAATTCTTCGTTGTCGAGACTCAGAACGGCACTGGAGAGGAAGACACCTCGGCCTGCTGACTACTTGTCTGATGAGATGCAGTTGGACGATCCCGTTCCCACTCGAAAACCCCTCTTGAACCCTCGACAAAGATTCAAGTGTGAATTGTGCAATAAAACTTTCCAGAAGAAATGTGGACTTTCAAAACATCAATATTTTTGTCCATATCAATCAAACACAGTACAGTCTGAAGCATCTTCAGCAGAAAAACTTCAAGAGGTTGAAGAGAGTGTTCCTTCAGAGGAAATGCATTGTTCACTGTGCAGTTTGACGTTTACTTCGAGGAGTGTATTTGTCAGTCATGTTCAGATGTACCACAAGGGGTCTTCGTTGGAGGACGGACTCTTGCGACTTAAGAAGCTGCCGGTAGTCGCCTCGAGCCGGCTGAAAGCAGCCACCAGGAAGGGACACGGCTATGTATGTAACCAATGTGGCAAAGTATTCAATTTAGTCTCCTCTTTGAATTATCATCTTAAGCTTCATTTCCAACAGCAGCAGCAGCGACAACATCAGGAACTACAATTGCAGCGACAACAACTGCATTTACAGCAACAGCATCAACAACAACAGCTGCAGCAACAGCAAGAGTTACAGGAGCAGCACGGGCAACAGTTACAGGAACAGCAAGAGCAACAGTTACAGGAGCAGCAAGAGCAACAATTACAGCAGCAGCAAGAACAACAGTTACAACAACAGCACAAACAACAACTCCAGCAGCAGCAACAACAGTATGAGCAAGAGCCAACCGATGGAATTGGTGTATACTTTTGTaaattctgtaaaaaaaattttgaacgaaGAAAGAAGTATCAAGAACATATCAGAACACATTTCCTACCACCAGGCTCGAAAGAAGTTTTATGCCACAAatgttttaaacttttttcaaCTCGTTCTGCATTCTGTATTCATCGAAGGAGCGGCATTTGTTATCCTAAACAGTTGAAATTAAAGCTTTATTCTTGCAATATATGCCATCATTCTTTTAAGAATTGTGAAACTTTGGATGAACATAAACTCAAAGCGCACGCTCCAACAATGCCTGAAACTCATTTGGAAGGCTCTCATTTCATGAGTGAGCTTCAAACCGACCATGCTCCTTCTTACACTTTGCCCGAAGAACCCGAACCAGCTGTTGTAGGTGAAGATGTGAGTCCAGGGACTTCTGTGGATCCCGGTGTTCCGCGGGATCCATATCGCTGCCATATATGTCCGAAAAGATTTCCTCTGATTTCCAGCGTGAAAAAGCATATTTGGAATGCTCATAATAAGAAGAAGTTAATTTCAGCTGGCTTGTTCAGTAGTGGTAATTGTAATATGAAAATGAGACTTATAAAACCATGGAAATGTCGACACTGCAAGAGTGCTCATTCATCCAGACGGATGTTGGTGCACCACTTGAAGAAATGCCAATACAATATGATCCAAGAAGGGGATGGAAATTGTCTGCAGTGCGGGAAATGGTGTGAATCTGAGAGACTAAGACTGTGCAGATTCTGCATCTCTGACCCGAGAACAGCCCCCACTTCGCAGTTCGCTTCCCCAGCTGGAACATCAACTCCCAGCGACCAAATACAGCCTCAACCCTATACCACTGAAGACTTCTTCCCAACAGATGAGTTTTTGGAGGATATGATTGAACCTGTTGAAGTCCCAGTTAAAATTCCGGCTAAGCAGCGAACTGTTCAAGATATTACTTTAATTAAGTGCCCTGCGggtaataaatattttctgaaagaaATTCATATGATAAAACATTACGCACAGTGTGATGGTTATTGTGAAAATCGTTGCAGTCATTGTAGAAGAATGTTCCATTCTCCGAGTGAATACAAGCATCACTTAGTCTACAACAAGTGCTACGGCACCAAAGGAGAAACGAAAAGAGCCTCACCAAAGAAACGATTGCCTGAGCCGAGTTTAGTTCCAGCAGATTTCGCGGAAGCTCAACTCGCAGAACCCGTCCCCACTTCTAATGATAATATATCTGTTGACGAAAGTCTTGTCGAGTCTGACATATCAGTACCAAGTTCGTCCACAAATCCTGTTGAACTTTCGGGAAATGTAAGAATTTGTAACATTTGTAACAAAGCTATTTACATGCAAAGAGCTCTTTATAGACACATTTATACTTGTTTTAAGATGTACATGTTTTCCCAAGAAAGTATTACTTGTGGCAAATGTGAACGTACGTTCAGCAAACACCTGACCATGAGAGAGAACACTTCTTTGATCAAGAGTCATGTTCTAGACTGTTACTACGTACCTTACTTTGAAGGGGAGGATGTATTGGCCAATGGCGAACCAGCTCCCCCCAAACCAGAATTTCTTTGTTATATTTGTTCATTTGGTTTTCCGACCAACGCTCGTCTACAGCTTCATCTTAAAGAGCACAGGAAGGGGGTTGGAACGAAGGATGCATTGAACAGAATAATTCTGAGACTTGAGGATTCAATTGTGATTCCTCAAGAATTTTTGGCAAATAATCCACAAAAAGCCATCATTAAGGGATGCAATGAGCCATCAAATGAAGCCAATTGGGGAGGAACGCCTCAAGAGGTGCAACCAAATCTTCAGCTCAACAGAAAAATAGAATTGGAAGATAATGTACGTGTaacaaaaaagaaatgtataatGAATATTAAGAATTACGCTTCTCAAAACATCCTGTACAGATTTCTTTCATCGGGTAAAAAAGGGATGAGGAAGGTTGCTATGTATGATTGTGAAGTTTGTCATAGAAGATTcgttaatagaaataaatacagaaatCACAAGAAAGTACACGGAATCATTCATAGGAATATATTCCCTGAAGCTAAAGTTGTATTGAATGCTGATCCAATTGATGAGGGACTTACTGAAAATAAGACTTACGAGGATAATATGATTGCAGAAGAGGAGGATGATGATGTTGGAATGAAAGATGGAAATAGCAACTATGAAGAACCTCTGGAACGCGTACAACATATGATAACGGATGAAGAGGCGGAAGATTTGATTGAAGAAGAAGATATTGATCCATTATGTCAAGACGATCTCAATGAAAATTTGCAACAGAGGGATGTGAAAAAATACATTTCGGATGAAGAAGATGAACTTCTAATGGAAAAAAACGTTTCAGATGTGGAGAGTGAACTACCTGCCGAAAAATGCCTTTCGGAAGTACAGAATGAACGACTACCTGAGGAAAAGTGCATTTCAGAAGTACAGAATGAACAACTACCTGAGGAAAAGTGCATTTCAGAGGTACAGAATGAACAACTAGCTGAGGAAAAGTGCATCATTGAAGTAGAAAATGAACAAATACCCGCAGAGAAAAACATTTCGGATGCAGAGTATAAACTATCTGTAGAAAAAGGCATATCGGACATGGACGATGAAGAACTACCTGTGGGAAAAGGCATTTTGAACGTTGTGAATGAATTACTCATGGGGAAAGGCATTTCAGATGTAGAGAATGAACTACCTGCCGAGAAAGGCATTTCGGAAGTAGAGAATGAGCAACTACGCGAGGAAGGCATCTCGGAAGTAGAGAATGAGCAACTACGCGAGGAAAAGGGAATTTCGGAAGTACAGAATGAACAACTACCCACTGAAGAAAACATTTCGGATAGAGAGATTGAACTACTTGCAGGAAAGAGCATTTCGGATTTTGAGAACGAACTTCCTGATGATCAAGGTGTATCGGTTGTAGAAAATCTGGAAAAAGACAATTCAGAAGTGATGCCAGAAGGAACTGAAACTGTCCCTGAAGAGATCGAGAATgaGTACTACCTACGGAAAAAGGTGTTATTAATGAATGAAGTACTCGTGGTGAACGGCATTTCGGATCTAGATAATGAACTACTTGCAGAGAAAGGCATTTCAGACATGGAGAACAGCTTTATGGACAGGGGGTTTCGATCGTAG
Protein Sequence: MHVASCRTGVWIHAATPWCIVSYRCIDTWCIVSYRCMDTWCIVSYRCMDTCCNAMVLRVVQICYIKEEPADPDSASGPRKVRVKSEFHIAEETQPQDEGDHLDGDYSEQTPGGHETLKCLTCNRSYSSFSALSKHMHTRVHLHNVKVSKSGGVLSCEEEELPSPPETLRPRTTFPVYNPSMFADPVFPSVSRQKKLRCRICGLVFRFPAELRRHLCTKKHRTNERIAERGLAYGGNKHLFMCPMGNCNFSCTKGVKLLSHMRAHGLSEPRSEGGQNAMFNRPESYFAFDKPIRQPFDDEDRQFDQFNARVGHINRQYDERQFESIDERPTVRQYEQDRPFELASSSSGTYGEDRRFEQAYARPGGFNRPLERDGRRFADQSGQISRPYGEDRQFEQVTARERPFGEDRRFEQAGNSKFEGDNFNSSLSRLRTALERKTPRPADYLSDEMQLDDPVPTRKPLLNPRQRFKCELCNKTFQKKCGLSKHQYFCPYQSNTVQSEASSAEKLQEVEESVPSEEMHCSLCSLTFTSRSVFVSHVQMYHKGSSLEDGLLRLKKLPVVASSRLKAATRKGHGYVCNQCGKVFNLVSSLNYHLKLHFQQQQQRQHQELQLQRQQLHLQQQHQQQQLQQQQELQEQHGQQLQEQQEQQLQEQQEQQLQQQQEQQLQQQHKQQLQQQQQQYEQEPTDGIGVYFCKFCKKNFERRKKYQEHIRTHFLPPGSKEVLCHKCFKLFSTRSAFCIHRRSGICYPKQLKLKLYSCNICHHSFKNCETLDEHKLKAHAPTMPETHLEGSHFMSELQTDHAPSYTLPEEPEPAVVGEDVSPGTSVDPGVPRDPYRCHICPKRFPLISSVKKHIWNAHNKKKLISAGLFSSGNCNMKMRLIKPWKCRHCKSAHSSRRMLVHHLKKCQYNMIQEGDGNCLQCGKWCESERLRLCRFCISDPRTAPTSQFASPAGTSTPSDQIQPQPYTTEDFFPTDEFLEDMIEPVEVPVKIPAKQRTVQDITLIKCPAGNKYFLKEIHMIKHYAQCDGYCENRCSHCRRMFHSPSEYKHHLVYNKCYGTKGETKRASPKKRLPEPSLVPADFAEAQLAEPVPTSNDNISVDESLVESDISVPSSSTNPVELSGNVRICNICNKAIYMQRALYRHIYTCFKMYMFSQESITCGKCERTFSKHLTMRENTSLIKSHVLDCYYVPYFEGEDVLANGEPAPPKPEFLCYICSFGFPTNARLQLHLKEHRKGVGTKDALNRIILRLEDSIVIPQEFLANNPQKAIIKGCNEPSNEANWGGTPQEVQPNLQLNRKIELEDNVRVTKKKCIMNIKNYASQNILYRFLSSGKKGMRKVAMYDCEVCHRRFVNRNKYRNHKKVHGIIHRNIFPEAKVVLNADPIDEGLTENKTYEDNMIAEEEDDDVGMKDGNSNYEEPLERVQHMITDEEAEDLIEEEDIDPLCQDDLNENLQQRDVKKYISDEEDELLMEKNVSDVESELPAEKCLSEVQNERLPEEKCISEVQNEQLPEEKCISEVQNEQLAEEKCIIEVENEQIPAEKNISDAEYKLSVEKGISDMDDEELPVGKGILNVVNELLMGKGISDVENELPAEKGISEVENEQLREEGISEVENEQLREEKGISEVQNEQLPTEENISDREIELLAGKSISDFENELPDDQGVSVVENLEKDNSEVMPEGTETVPEEIENEYYLRKKVLLMNEVLVVNGISDLDNELLAEKGISDMENSFMDRGFRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -