Basic Information

Insect: Aradus depressus
Gene Symbol: -
Assembly: GCA_963662175.1
Location: OY759216.1:17762037-17782632[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0005 0.086 14.7 4.1 1 23 229 251 229 251 0.97

2 11 1.5e-05 0.0027 19.5 1.5 1 23 257 279 257 279 0.98

3 11 0.00074 0.13 14.2 2.3 1 23 285 308 285 308 0.96

4 11 0.061 11 8.1 3.4 1 21 314 334 314 336 0.95

5 11 0.00015 0.027 16.3 1.9 1 23 342 364 342 364 0.99

6 11 5.1e-05 0.0088 17.8 0.3 1 23 370 392 370 392 0.98

7 11 0.00057 0.098 14.5 0.8 1 23 400 423 400 423 0.97

8 11 0.00019 0.033 16.0 1.8 2 23 430 451 429 451 0.97

9 11 0.00022 0.038 15.9 0.2 2 23 458 479 457 479 0.97

10 11 2.3e-06 0.00039 22.1 1.7 1 23 485 508 485 508 0.97

11 11 1.7e-06 0.0003 22.5 1.7 1 23 522 544 522 544 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0005	0.086	14.7	4.1	1	23	229	251	229	251	0.97
2	11	1.5e-05	0.0027	19.5	1.5	1	23	257	279	257	279	0.98
3	11	0.00074	0.13	14.2	2.3	1	23	285	308	285	308	0.96
4	11	0.061	11	8.1	3.4	1	21	314	334	314	336	0.95
5	11	0.00015	0.027	16.3	1.9	1	23	342	364	342	364	0.99
6	11	5.1e-05	0.0088	17.8	0.3	1	23	370	392	370	392	0.98
7	11	0.00057	0.098	14.5	0.8	1	23	400	423	400	423	0.97
8	11	0.00019	0.033	16.0	1.8	2	23	430	451	429	451	0.97
9	11	0.00022	0.038	15.9	0.2	2	23	458	479	457	479	0.97
10	11	2.3e-06	0.00039	22.1	1.7	1	23	485	508	485	508	0.97
11	11	1.7e-06	0.0003	22.5	1.7	1	23	522	544	522	544	0.96

Sequence Information

Coding Sequence: ATGAGCACTAAAAAAATAGCAGTGAGAAACGGCCAAGCCATCCGTGTTATAAAATTGGATGGTCCCCCTGGTGAAACTGCTGGAGGTGAATCAATTACGGATATTCAAAACTATTTAGAAACCTTCAACAAAGAAATAGAAGGTGGAGGGGATGCTGCGAGTACTAACCAAATTGTCAAATTTGAAGCAGcTGAGGGATCAGGTGAAGAGAATATAGAAAACGGCGAATCAGGTGCTTATTATATTGATCAGGCTACGGGACAATACTACTACGAATCAAGATCTGAATCTGGCCAACGAGTGATGACTGTAGTTCAAGGTATTCCTGAGTCCCAACAGGGTGAAGAACAGTTCATATCCATTTCGGAGAATGAAACCGAAGAAGTTGAGACTGGATCCGAAGATGTGCAAGTTGTGGACGACAATGGAGAAATGGTGCTGGGTGGTTCAGACTCTTATCAGACAGTGACTATAGTCCCTTCAGAGACCACCTCTGGAGAGGTGAGCTACGTCCTCATCGTACAGCAGCCTGAAGACAAGGAGAAGGACGACGACCTCACAGTTTACGACTTTGAAGATAATGAGGATCAGAATCCAATCAGTGGAGCTGAATCAGGTGACGAAGAAGATAAatcaaaaattgtaaaaatgctTCCTCGGAAATCACAGACTGTTACTCAGGCTCATATGTGTAATTATTGTAACTACACAAGTCCTAAAAGGTATCTCCTATCAAGACATATGAAGTCCCATTCGGAAGAACGACCACACAAGTGTAGCGTGTGCGAAAGAGGATTTAAAACATTGGCCTCGCTCCAGAACCATGTTAACACTCATACGGGTACAAAGCCACATCGGTGTAAATATTGTCTGAGTGCCTTTACAACCTCAGGAGAACTGGTGCGACATGTGCGGTACAAGCATACTCATGAAAAACCTCACAAATGTACCATATGCGACTATGCTAGCGTTGAATTAAGTAAAATGAGAAATCATATGAGATGTCATACTGGTGAACGACCCTATCagtGTCCTCATTGTACCTATGCCAGTCCAGACACTTTCAAATTGAAACGCCATCTTCGAATccatacaggagagaaaccaTACGAATGTGATGTTTGTTCTGCTCGATTCACCCAGTCCAACAGTCTGAAAGCACACAAACTCATCCACAGTGCTGGTGACAAGCCGGTGTATCAGTGCGAGCTCTGCCCCGCTACCTGTGGTCGGAAGACAGACCTAAGGATACATGTACAGAAACTTCACACCTCGGACAAACCTATCAAGTGTAAACGGTGTGGCAAACAGTTCCCTGACAGATATTCATATAAGGTACACAACAAATCCCACGAAGGTGAGAAGTGCTGGAAATGTGATGTATGTCCGTACGCTTCAGTCTCCCAACGTCATCTAGAGTCCCATATGCTCATACATACGGACGAGAAGCCCTATCAATGTGAACAATGTGATCagGCATTCAGGCAGAAGCAACTGTTGAGACGGCATCAGAATCTGTATCACAATCCAAACTATGTACCTCCTGCGCCGCGTGAAAAGACACACGAATGTCCCGAATGTCAGCGTGCATTTAGACATAAAGGGAACCTCATCAGGCATTTGTCTGCTCACGATCCCGAATCATCCGCAGCTGAGAAAGCTCTGGCTCTCAAATTAGGAAGACAAAAGAAaGTGCAGATCATCGACGGACAACAGGTGGAGGTGATGCCTGGCGAGGATGAGGACGAGGAGGACGATGAAATGGACGACATCAGCAGTGGGAACGTGGTCGCTGTTGAGGGCTCTGACGGACAACAGTATGTCGTCCTTGAAGTCATACTGCCTGACGGTGAAGACGGAGAGCAGCAGGTGGCTGTAATGAGTGGAGAACACTCGGTAGAGCAGGCTGTGGCCATGCTCCATGCAGATCAGGATGAGGAGATACTACCCACCATAAAGTCGTCACCATCATCTATAcgtGGTAGGAGTGCTCGTAGCAAAGAAAGCGGGACAAGCCTTCAACAGGATATGGACAACTGTTTCGGTTTTGATGAGGACGAAGACGACCCGAGAGAGGAGGTGGAGACTGTGATACCTTCTAAAGCTGAAATACATATAATCACTGAGGAAGAGACCTAA
Protein Sequence: MSTKKIAVRNGQAIRVIKLDGPPGETAGGESITDIQNYLETFNKEIEGGGDAASTNQIVKFEAAEGSGEENIENGESGAYYIDQATGQYYYESRSESGQRVMTVVQGIPESQQGEEQFISISENETEEVETGSEDVQVVDDNGEMVLGGSDSYQTVTIVPSETTSGEVSYVLIVQQPEDKEKDDDLTVYDFEDNEDQNPISGAESGDEEDKSKIVKMLPRKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKYCLSAFTTSGELVRHVRYKHTHEKPHKCTICDYASVELSKMRNHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDVCSARFTQSNSLKAHKLIHSAGDKPVYQCELCPATCGRKTDLRIHVQKLHTSDKPIKCKRCGKQFPDRYSYKVHNKSHEGEKCWKCDVCPYASVSQRHLESHMLIHTDEKPYQCEQCDQAFRQKQLLRRHQNLYHNPNYVPPAPREKTHECPECQRAFRHKGNLIRHLSAHDPESSAAEKALALKLGRQKKVQIIDGQQVEVMPGEDEDEEDDEMDDISSGNVVAVEGSDGQQYVVLEVILPDGEDGEQQVAVMSGEHSVEQAVAMLHADQDEEILPTIKSSPSSIRGRSARSKESGTSLQQDMDNCFGFDEDEDDPREEVETVIPSKAEIHIITEEET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01309657;
90% Identity: -
80% Identity: -