Basic Information

Insect: Aradus depressus
Gene Symbol: -
Assembly: GCA_963662175.1
Location: OY759219.1:39979950-39983117[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.6 2.7e+02 3.7 1.0 1 23 495 517 495 517 0.95

2 17 0.002 0.35 12.8 0.5 1 23 523 545 523 545 0.98

3 17 0.036 6.2 8.9 2.6 2 23 591 612 590 612 0.96

4 17 0.0044 0.77 11.7 0.2 2 23 619 641 619 641 0.88

5 17 0.0013 0.23 13.4 1.7 1 23 647 670 647 670 0.96

6 17 2.6e-07 4.4e-05 25.1 0.8 1 23 678 701 678 701 0.98

7 17 0.014 2.5 10.1 0.5 1 23 711 734 711 734 0.94

8 17 0.056 9.7 8.3 1.1 1 23 755 777 755 777 0.96

9 17 0.0006 0.1 14.5 0.1 1 23 783 805 783 805 0.98

10 17 0.43 75 5.5 0.7 1 23 824 846 824 846 0.90

11 17 0.29 50 6.0 1.0 1 23 852 874 852 874 0.96

12 17 2.5e-06 0.00044 21.9 0.7 1 23 890 912 890 912 0.99

13 17 9.8e-07 0.00017 23.2 0.6 1 23 918 940 918 940 0.98

14 17 0.00048 0.083 14.8 0.2 1 23 946 968 946 968 0.98

15 17 0.0009 0.16 13.9 3.4 1 23 974 996 974 996 0.98

16 17 9.4e-06 0.0016 20.2 0.9 1 23 1002 1024 1002 1024 0.99

17 17 2.4e-05 0.0042 18.8 0.6 3 23 1032 1053 1031 1053 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.6	2.7e+02	3.7	1.0	1	23	495	517	495	517	0.95
2	17	0.002	0.35	12.8	0.5	1	23	523	545	523	545	0.98
3	17	0.036	6.2	8.9	2.6	2	23	591	612	590	612	0.96
4	17	0.0044	0.77	11.7	0.2	2	23	619	641	619	641	0.88
5	17	0.0013	0.23	13.4	1.7	1	23	647	670	647	670	0.96
6	17	2.6e-07	4.4e-05	25.1	0.8	1	23	678	701	678	701	0.98
7	17	0.014	2.5	10.1	0.5	1	23	711	734	711	734	0.94
8	17	0.056	9.7	8.3	1.1	1	23	755	777	755	777	0.96
9	17	0.0006	0.1	14.5	0.1	1	23	783	805	783	805	0.98
10	17	0.43	75	5.5	0.7	1	23	824	846	824	846	0.90
11	17	0.29	50	6.0	1.0	1	23	852	874	852	874	0.96
12	17	2.5e-06	0.00044	21.9	0.7	1	23	890	912	890	912	0.99
13	17	9.8e-07	0.00017	23.2	0.6	1	23	918	940	918	940	0.98
14	17	0.00048	0.083	14.8	0.2	1	23	946	968	946	968	0.98
15	17	0.0009	0.16	13.9	3.4	1	23	974	996	974	996	0.98
16	17	9.4e-06	0.0016	20.2	0.9	1	23	1002	1024	1002	1024	0.99
17	17	2.4e-05	0.0042	18.8	0.6	3	23	1032	1053	1031	1053	0.97

Sequence Information

Coding Sequence: ATGAAGCTGGTCGTAAGAAATACTTCGGGGGAAACAGTTTCGCTTCAGATAAGTTCAGATGAAACATTTATTGGGTTAAAAGAGAGAGTGGAAGAAGAAGCTGGAATATCTTTAGACCTAAAAGACATCGCACTGAAAGGTAAACGTGTGTCCGAAGATCAGAAAGTTGAAGAATATTTCCTTGCATATGCGAGTAATGCTGATAATGAAAGTGAAAATAACTCCTATTGTGTAGTTCCAGGCTGCAGTAACACTAAATCACAGAATCCAGAAAAAGTATTTTTTGAGTTTCCCGAAGAAGAGATACGATGTCATCAGTGGGTGATGTACTGTCAGCGTCTTTATACAGGGCCTGGAAAACATCGTTTAAGTATTACTGCTGACTCAACTATTTGCAGTGATCATTTTCTCCCTGATCAATTTGTAAAAAATGCTCATACATTGTTAAAAAGAACTGCTATTCCTTCAGTTAAACCCTCAGGTTTCTTGTGTAATGACAGTGAAGACCAAGGATCTAAAGATGATAAAGCATCAAGTTCAGAGGATGACTCTCTCATGAAGTGTGCTCCCCAAAGACTTTGTCGCTTGTGTGCTTGCTCTTGTCCTCCTTATGAGATGATTAtgctttttgaaaaaaatgaaattgggATGAGAGTAGcggataaaattaatttatgctTGCCCATTCAGGTTAAAGCGACTGATCCACTTCCAAAGCAAATATGCGGATTGTGCAATCATCAGCTAAATACACTTTTTGAATTGGCAGATCTTTGCACTATTTCACAGAATGAGATGCTCTCTACTGAAGAAAAGAATCAAGAAAAAGGGAAAAATAAGTGGTATGATGATACACTAATTTCGGGTGTAGAACTAGGAGAAACTGTACTTCCTGATGATGTTGTGGAAGAAGACTCAGGATTGCCAAcggaaaataatttgttacacgTAGTGTGTCCTCATTGTTTGGAAGGGGAATTGAATTATACAAAGGAAATTGTATCAAATGAACCTTCCAACTCTTCTGAAGAAAACGCAAATTTTCTGGTTCAAAACAGTCAAATTGTAAAAGACGAAGGGAAAACAAACAGTCCTTCAATAGAAATATTCTCAACGAATGAATCTACAGATGTAATAGAATTTAGGAAAGAGACCATTCCGGAAGATAACAATTTTGTTTCAAAGgaatctatttttatttctgaaatGAATTCTGAAAATCTAGTTATATGTAAAACAGAAGTTGAAGACATCAACATTGATGATATAACATGCGAAACAGAGCCTGATGACACTTATTCCGATATAATGTTCAATAATGAAAGTCCTTTTAGTAAAAACCCACTGAACACTACAGAATTTACACAGAAACCTGGTAATTCCAAAGAAGATTTACCCTTCAATTCGGAAACTTCATGTCCACCGAAAACAGCCAATGGCTCTGGTGAAGATGAAAAAGACAAATctgaaaattttacagaataTTTTTGCAGAATTTGTGCTTTTGGATTTAAAACAATCAAAGCTGTACTAAAACATTCTTACACTCATTCCCATAAAGGGTTTTATCAATGTTCCGTTTGTGTTATCTTTTTCACCAATAAAATTGATATGATGACACATTTGGAGAAACATGAGGAAATGCGAGATTTCCAGTCGGCTTCAGATAATTCACAATGTGACAATGGTCATAACATTATTGGAACAAAATCAAATTCTTCCTCACAGCAAGATTCCCCCTTACCGTCTGATGAATTGTCCGATGGGAATAAATGTATGATTTGCAAGAAGATCTTTCGCTCTGAATCTAGACTTAAGTTTCATATGCAATTTCACAATACGAAAACACCTAATTATTGTGAAATATGTGATAAATCTTTTCCTGATGAATTGAAATTGTATAAACATTCAATTTACGTACACAATTCTACAAAGGGTCATGTCTGTGAGGAGTGTGGAAAGATTTTCAAATCTGAAGCCTCGATGAGGTTCCATCAACGTTCATTCCACACGGAAACTATATTTAAGCCTTACACCTGTGAACGATGTGGGAAAGCATTTATTCGTAAAAGCATGCTTATGAATCACATGCAATCATCGCATAAGCAGTTCAATTTTGAAACGTCATGCTTCACTTGCAAGCTTTGCCATGAAGCTTTCCCGAGCACCACATCAGCCGTGGCCCACATGGACAACCAACACAAGGCAGAGTGTATGGACGAGTCTACGTACAGTTTTGATATGCTTACACTGACACGTATGTTCGTTTGTGAATTTTGCGAGCGTTGTTTTGCCGAAGGGAGTGTACTTAATCTTCACCGAGACAAACACCCAAATGACACACCCTATGAATGTAAAATTTGTGAATTGGCATTTGCCTCTTCGGAGGAAGCAAAGAGTCACAGAAAAATACACAAGAATAAAGAAACTCCAGTTGAATATCAATCCGAATTTCTCATTCCTAACACTTTTTTGTGTGAGTATTGTGAAAGATCTTTTCTCAACTATGTTAAGTATTCAGAACATCTGACTGTGCATTATGGACGAGAGCCGTACCAATGTCGACAGTGCGAATCAAAGTTTTCTTCACTCGAACAGGCCTTAGAACACAGATCTCAACATGGAGAAGCAAATTACAAAGCGGAAGAGTTAAATTTTTATCGCCCATATGAATGTCACTACTGCAGTAAGTCTTTCGCTATTGAAGACGCCCTTATCAAACACATCAGGATGCACACTGGCGAAAAACCATTTGTATGTAGTCAGTGTGGTAAGGGGTTTTCGCAAAGTTCTGGTCTGTACACCCATCAAAAAGTACACTCAACATTAAGACCCTACGAATGTCCAATCTGCCCAAGAACATTCAAAATCAAAGGGGATAGAGACGTACATGTTCGTAAACATTCAGGAGATCGTCCATACAAATGTGAATTCTGTGGAAAAGCATTCATGACTCAACATGTTTACAGTCAACATAGGAAGATTCACACAGGAGAACGTCCCTACAAATGTGACGTTTGTGGTATCGCTTTTCGTAGATCTCATGTACTCACAGTTCACAAAAGGATTCACACTGGGGAAAAGCCGAATATTTGCGACATCTGCGGCAAGCGGTATCGCCAAAAGGGCGACATGTTAAAGCATAGACGAATTCAGCACGGCGTGTAA
Protein Sequence: MKLVVRNTSGETVSLQISSDETFIGLKERVEEEAGISLDLKDIALKGKRVSEDQKVEEYFLAYASNADNESENNSYCVVPGCSNTKSQNPEKVFFEFPEEEIRCHQWVMYCQRLYTGPGKHRLSITADSTICSDHFLPDQFVKNAHTLLKRTAIPSVKPSGFLCNDSEDQGSKDDKASSSEDDSLMKCAPQRLCRLCACSCPPYEMIMLFEKNEIGMRVADKINLCLPIQVKATDPLPKQICGLCNHQLNTLFELADLCTISQNEMLSTEEKNQEKGKNKWYDDTLISGVELGETVLPDDVVEEDSGLPTENNLLHVVCPHCLEGELNYTKEIVSNEPSNSSEENANFLVQNSQIVKDEGKTNSPSIEIFSTNESTDVIEFRKETIPEDNNFVSKESIFISEMNSENLVICKTEVEDINIDDITCETEPDDTYSDIMFNNESPFSKNPLNTTEFTQKPGNSKEDLPFNSETSCPPKTANGSGEDEKDKSENFTEYFCRICAFGFKTIKAVLKHSYTHSHKGFYQCSVCVIFFTNKIDMMTHLEKHEEMRDFQSASDNSQCDNGHNIIGTKSNSSSQQDSPLPSDELSDGNKCMICKKIFRSESRLKFHMQFHNTKTPNYCEICDKSFPDELKLYKHSIYVHNSTKGHVCEECGKIFKSEASMRFHQRSFHTETIFKPYTCERCGKAFIRKSMLMNHMQSSHKQFNFETSCFTCKLCHEAFPSTTSAVAHMDNQHKAECMDESTYSFDMLTLTRMFVCEFCERCFAEGSVLNLHRDKHPNDTPYECKICELAFASSEEAKSHRKIHKNKETPVEYQSEFLIPNTFLCEYCERSFLNYVKYSEHLTVHYGREPYQCRQCESKFSSLEQALEHRSQHGEANYKAEELNFYRPYECHYCSKSFAIEDALIKHIRMHTGEKPFVCSQCGKGFSQSSGLYTHQKVHSTLRPYECPICPRTFKIKGDRDVHVRKHSGDRPYKCEFCGKAFMTQHVYSQHRKIHTGERPYKCDVCGIAFRRSHVLTVHKRIHTGEKPNICDICGKRYRQKGDMLKHRRIQHGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00154566;
90% Identity: iTF_00154566;
80% Identity: iTF_00154566;