Basic Information

Insect: Aradus depressus
Gene Symbol: -
Assembly: GCA_963662175.1
Location: OY759221.1:40094264-40114105[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3e-06 0.00051 21.7 1.0 1 23 121 143 121 143 0.97

2 15 6.5e-06 0.0011 20.6 1.5 1 23 149 171 149 171 0.98

3 15 3e-05 0.0051 18.6 0.3 1 23 264 286 264 286 0.98

4 15 0.0015 0.26 13.2 0.1 1 23 292 315 292 315 0.94

5 15 0.0024 0.42 12.6 2.3 1 23 351 373 351 373 0.98

6 15 0.59 1e+02 5.0 1.7 1 20 385 404 385 407 0.84

7 15 8.6e-05 0.015 17.1 0.8 1 23 414 437 414 437 0.96

8 15 0.00032 0.055 15.3 3.1 1 23 441 463 441 463 0.96

9 15 0.00022 0.039 15.8 3.0 1 23 469 491 469 491 0.98

10 15 0.02 3.4 9.7 0.2 2 23 500 522 499 522 0.95

11 15 0.00042 0.073 15.0 1.4 1 23 530 552 530 552 0.98

12 15 0.0027 0.47 12.4 0.2 3 23 560 580 558 580 0.97

13 15 1.8e-05 0.0032 19.2 0.3 1 23 586 608 586 609 0.96

14 15 0.0018 0.31 13.0 0.1 1 23 621 643 621 643 0.95

15 15 8.5e-06 0.0015 20.3 0.3 2 23 962 983 961 983 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3e-06	0.00051	21.7	1.0	1	23	121	143	121	143	0.97
2	15	6.5e-06	0.0011	20.6	1.5	1	23	149	171	149	171	0.98
3	15	3e-05	0.0051	18.6	0.3	1	23	264	286	264	286	0.98
4	15	0.0015	0.26	13.2	0.1	1	23	292	315	292	315	0.94
5	15	0.0024	0.42	12.6	2.3	1	23	351	373	351	373	0.98
6	15	0.59	1e+02	5.0	1.7	1	20	385	404	385	407	0.84
7	15	8.6e-05	0.015	17.1	0.8	1	23	414	437	414	437	0.96
8	15	0.00032	0.055	15.3	3.1	1	23	441	463	441	463	0.96
9	15	0.00022	0.039	15.8	3.0	1	23	469	491	469	491	0.98
10	15	0.02	3.4	9.7	0.2	2	23	500	522	499	522	0.95
11	15	0.00042	0.073	15.0	1.4	1	23	530	552	530	552	0.98
12	15	0.0027	0.47	12.4	0.2	3	23	560	580	558	580	0.97
13	15	1.8e-05	0.0032	19.2	0.3	1	23	586	608	586	609	0.96
14	15	0.0018	0.31	13.0	0.1	1	23	621	643	621	643	0.95
15	15	8.5e-06	0.0015	20.3	0.3	2	23	962	983	961	983	0.97

Sequence Information

Coding Sequence: ATGGCGAATTCAATTGTTATGCCTGAAGAGGCGTACGGATTTAACTATGAATGGATAGCTGCTGGTTCTGGAATCGGGGAAGAAATTTGTGGTGTTGATAAAGATTGTATCGTAGTGCCTACATCACCGGAATTACCCAAAATCGAACATATAGAAACTGAGGTTATTGGAGGTGATTATGTTGAGATTCAAGTGACAGAAGAAGAGGTTGTAACAGACCAATGGTCTGTACCTACCGTTGGATGTGACCCTGAGGACGGAGGTCTCGTTGGGGTGGTGGATGGTGGGGTCTCTTTGAGGAGAGCCCCTCCAGAGCTCATGGTGGTGGCCGATGAGGATGAGTACTCCCGACTTCATCCCTACCCTTGTGACTTCTGTAGTCGCCGCTTCAGTAACAAGTCCTCCCTCACTGTTCACATGGTCTCCCATCAGGTGGACCGCCCTCATAGATGTAACCTATGCGGAGCCACCTATCGGCGAAAATACGATCTCGTGGAACACATGAAAATCCACGCATATGCCCCTATCAAAACGGAAGTGGAAGAGGACGAGTATGATGACTTCACAGAGTTACCGCCCCAGACGAAGATAAAACAGAAGACCCGACGGAAAAAGAGAACTGTAAAGAAACAGTACCGATACAAAGAGGATGAAGAGAGGAAGGTGTCCCCTGTCTTCAAGAGCAGCCCGCCCTTTGTCTATGAGGAGGAGCAGGAGGATACCAAGTACGGACTTGAGGAGgaagaAGTGGTCTCCAACAAGTTCCCCGTCCTCAACCCCTCCCGGCCTTACGTTTGTCAACATTGCGGGATTGGCTTTGCCCGAGAGAAAGCACTCACTTCACACACGATGGTCCATGTTGGAGACTCAGCCTATGAGTGTGAGACCTGCGGGGATATGTTCCAAAGTTCCTCAGAGCTGGAGGCCCACCGAGTGTCTCGTCACTTCGCCAGCGCAGGGGTCGGAGGGGGCAGGAAGCGAAGTCATGGCTACACGATGCACCACGAAGACAGTGGTGGGGGAGGGGGCCCTGGAGCCAGTGTGGGCACCTTCCAGTGTAACGAGTGTGGACTCACCTTCCAGTGGTTCAACCAGTTGAAGAAACATCGCAAGAGTCACGTGAAGGAGGAGGAAGAGAGTGGTGGAGAGAGTCATGTGTGTTCATTGTGTAACCTGGTGTTCAACACGATGGATGAGCTGCTCTGTCACAAGGAGGACCATGATCCTGACATTGGGGTACACTCCTGTTTCCTCTGCGGAGAGGTATATGAGAGTGTGTCTGACCTGAAGGAGCACATGCGGAGCCGACACAAGTCTAGTCACATGTGTCACCTCTGTGAGAAGATGTTCAAAGACGAGAAGGGGCTGTCACGGCATCTCGCCTCCCATATGGAGTCCAAGTCATTCCCCTGCAGTGTCTGTTCCAGGAGGTTCCACAACAAGGCAAGACTCAAAAAACACATGAGCATTCACGAGGATGTTCGAGCGGGCGGTCTGACCTGCCGAGAATGCGGTTCCTCCTTCCCCGATGGACAGACCCTGCTCACCCACCGACAGTCTGTCCATGGGATCAACCTAAATCGTATGTTCCCCTGTATGCAGTGTGGCAAGGCATTTAACTCGAGATCCTCACATCAGATTCACCTCCGTATCCACACAGGAGAGCGCCCCTACGGATGCCGCTACTGCTGGAAGGCCTTCGGAGACGGAGGCACCCTGAGGAAACATGAGAGGATTCACACTGGAGAGAAGCCCTACGTCTGTCCCGTCTGCAGCAAGGCCTTCAACCAGAGGGTGGTGCTGCGAGAGCACATTCGGGCCCACCATTCGGGCTCAGAGGGCCGGCTGAACGATGCTCGGTTTGTCTGTGTGGTGTGTGGCTCCATCTTCGGGACCTCCAGTGAACTGTGTGCCCACTTGGTGCTCCACAGTGATGAGAACACGGCCAAGAGCAGGGCTCCCAAGGCCAGGAAGTATGTCCGCAAGAGaagatTCCCAATGCTGCCGCCAGGATGTCCAGAAGGGACAAGTGAAGTCTCGGAAGATTCAGGGGAGGAGGAAAGCCGGAAGAAGCCAGCCTTACTGAGGAACAACCACCACAGTTCCTTGCTGGAGAGTCCACCGGAGGTTCTACGAGAGGAGCCCCTCATAAAGACAGAACTAGCAGCCACAGTGACGAGCAGCAGTCTGTTGGAGCTAGGGGCGAGTGGGAGAGGGAGGGCGAGGATAGTAAGGTCGGGCAAGAAGGGCGCCGTCCGGGGACAGAACAAGAGGTACATGAAAGGCAAGACGAAGGCAGCCCGTCTTTTGAACAACACAAGTTATGCCTCCAAGTATGTGGTGACCCGGTCCGAGAGTGAGGAGACAGGAGAGAGGGCCAGCGGTGACCATGCTCCTTACGAGAACGGAAGTTTAAGTCCATCCTCAGCAGCGACGGTGACGCTTCCTAGCGGGGGGCTTCAGCGGAGCCGACCTCGCACCAAGAATGTGAGCTACCACAACCCAACGAGGGGCGGACAGAGGTTCGAGGCAGCCACGTTCCCAACACCGGCCCCCTCACCCCCACTAGTCGTGGCGCCAACGAGACGACCCAAAATCCGTCGAGGCTCCTCCAAAAGAGCAGTGGTCCAGGAAGATGACTGTCTGGACGGGAGAGGGGGAAGGGGTGAGAGTCATCATCAGACGACCACTGTTCGACACTTCGACAATGACTATGTGAATGGGATCGGTGACTTGTTCGATGAGGATAGTGGAAGTGGGGAACAGATAGAGACGTGCATCGTGGATGATATCGGTGTCGAATTGAAACTTGAAGTGAAGAGCCCAATTCATGAGGAAAAGACTACTTGCTATTTTGAAATTGGACTCCGGACTGAAGTGGTGTCGTGTGATATGTGCAGCCAGGTTTTCACATCCCGGTCTGACCTTCTTAAACATATACAGGTCCATATATAG
Protein Sequence: MANSIVMPEEAYGFNYEWIAAGSGIGEEICGVDKDCIVVPTSPELPKIEHIETEVIGGDYVEIQVTEEEVVTDQWSVPTVGCDPEDGGLVGVVDGGVSLRRAPPELMVVADEDEYSRLHPYPCDFCSRRFSNKSSLTVHMVSHQVDRPHRCNLCGATYRRKYDLVEHMKIHAYAPIKTEVEEDEYDDFTELPPQTKIKQKTRRKKRTVKKQYRYKEDEERKVSPVFKSSPPFVYEEEQEDTKYGLEEEEVVSNKFPVLNPSRPYVCQHCGIGFAREKALTSHTMVHVGDSAYECETCGDMFQSSSELEAHRVSRHFASAGVGGGRKRSHGYTMHHEDSGGGGGPGASVGTFQCNECGLTFQWFNQLKKHRKSHVKEEEESGGESHVCSLCNLVFNTMDELLCHKEDHDPDIGVHSCFLCGEVYESVSDLKEHMRSRHKSSHMCHLCEKMFKDEKGLSRHLASHMESKSFPCSVCSRRFHNKARLKKHMSIHEDVRAGGLTCRECGSSFPDGQTLLTHRQSVHGINLNRMFPCMQCGKAFNSRSSHQIHLRIHTGERPYGCRYCWKAFGDGGTLRKHERIHTGEKPYVCPVCSKAFNQRVVLREHIRAHHSGSEGRLNDARFVCVVCGSIFGTSSELCAHLVLHSDENTAKSRAPKARKYVRKRRFPMLPPGCPEGTSEVSEDSGEEESRKKPALLRNNHHSSLLESPPEVLREEPLIKTELAATVTSSSLLELGASGRGRARIVRSGKKGAVRGQNKRYMKGKTKAARLLNNTSYASKYVVTRSESEETGERASGDHAPYENGSLSPSSAATVTLPSGGLQRSRPRTKNVSYHNPTRGGQRFEAATFPTPAPSPPLVVAPTRRPKIRRGSSKRAVVQEDDCLDGRGGRGESHHQTTTVRHFDNDYVNGIGDLFDEDSGSGEQIETCIVDDIGVELKLEVKSPIHEEKTTCYFEIGLRTEVVSCDMCSQVFTSRSDLLKHIQVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -