Adep015475.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- -
- Assembly
- GCA_963662175.1
- Location
- OY759216.1:48934746-48944969[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.00024 0.042 15.7 0.8 2 23 140 161 139 161 0.95 2 29 3.7e-05 0.0065 18.3 0.8 1 23 174 196 174 196 0.96 3 29 0.00053 0.092 14.6 1.9 1 23 221 244 221 244 0.97 4 29 0.0015 0.27 13.2 1.8 2 23 251 273 250 273 0.96 5 29 0.031 5.3 9.1 0.8 3 23 348 369 346 369 0.90 6 29 0.018 3.1 9.8 0.8 1 23 398 421 398 421 0.95 7 29 0.054 9.3 8.3 1.3 3 23 429 450 428 450 0.96 8 29 0.012 2.1 10.4 0.2 2 23 531 553 531 553 0.95 9 29 0.17 30 6.7 0.3 2 23 601 624 600 625 0.87 10 29 0.0087 1.5 10.8 0.1 2 23 634 656 634 656 0.95 11 29 7.6e-05 0.013 17.3 0.1 1 23 662 685 662 685 0.96 12 29 0.00066 0.11 14.3 2.6 1 23 693 715 693 715 0.97 13 29 0.0041 0.71 11.8 1.1 2 23 776 798 775 798 0.95 14 29 0.0017 0.29 13.1 1.2 2 23 805 826 804 827 0.94 15 29 0.014 2.3 10.2 2.7 1 21 850 870 850 871 0.95 16 29 7.1e-05 0.012 17.4 2.7 1 23 890 913 890 913 0.96 17 29 0.032 5.6 9.0 0.4 1 23 916 939 916 939 0.94 18 29 3.1 5.4e+02 2.8 0.8 2 23 946 969 945 969 0.90 19 29 0.089 15 7.6 0.7 3 23 1008 1029 1006 1029 0.94 20 29 0.00028 0.048 15.5 2.4 1 23 1037 1059 1037 1059 0.98 21 29 0.00025 0.044 15.7 0.2 2 23 1065 1086 1064 1086 0.96 22 29 0.00094 0.16 13.9 0.4 2 23 1149 1171 1148 1171 0.95 23 29 0.76 1.3e+02 4.7 0.3 2 23 1236 1258 1235 1258 0.92 24 29 6.2 1.1e+03 1.8 0.6 2 23 1265 1287 1264 1287 0.92 25 29 0.52 89 5.2 0.9 2 23 1299 1320 1298 1320 0.93 26 29 0.9 1.6e+02 4.5 8.9 1 23 1332 1355 1332 1355 0.96 27 29 0.0013 0.23 13.4 0.3 1 23 1387 1409 1387 1409 0.97 28 29 0.00043 0.075 14.9 1.1 1 23 1415 1438 1415 1438 0.94 29 29 0.049 8.4 8.5 0.5 1 19 1443 1461 1443 1464 0.93
Sequence Information
- Coding Sequence
- ATGAATGAGTCTCCATTACAGAACTATGAAGAACTGTGCAGATTGTGTGCCTCTTATGATGCTATCAAAGTACCCATTTTTAGTGAACAAGGCAAAGAACGGAGTTTGAGAGATAAAATAACCACTTGTCTTCCATTCGAGGTATCGGAAGATGATTTGTATCCTAAATCGTTATGCTACAGATGTATTTACAATCTTGAAAATTTTTATGACTTTAGACGTGGGTGTATAGATGCAAGAGCTAGATTGGAAAGtgttataaaacaatttttaaaacaagAATCTGAGgaATTTCCGCCTAGATTAGAGGATGACATAGTTGAATCAGATAATGAAGATGTACCAAATCCGGCTGATTTTTTGGAAGCTTGTTTGGGTGAATCTCCACAAGAAAATAACGAAGATGAAGGCCCACTCTCGTGTAAAGTGTGCGGCCGGCTGTTTAACTCAAAAAGTTCTCTGACCATCCATGCCAAATTCCACCAGGATTGTGGAGGTGGTCCAGAGAGTGAAAGGGACTTCGCATGCTATGTCTGTGACAAAGTGTTCTCCAGTAAGGGACATCTGGCACTCCACTCCAAGGTGCACATCGGCGAGACAGCTACATCCTCCACATTGGCTCACTATACCAAGTCTTCTGCTTCCTCCCTGCCCAGACTGTACCAGTGTGACTTGTGCCACAAGTCGTACTCTATGGCCAAACATCTGTGGGGTCACGTGAGCACCGCCCACAAGGGACATCCTCTGGTCACCTGTTGCCTCTGCCAGAGGACCTTCTCATCTGTGGCCAACCTCGAGGATCACAAGAGGGTCAAACACAAGGGGGAGAACATGgtgacCACAAATGGTGATTTGGACGGAGACCTGGACGGCTCTGCTTCAGATAAAAAGTTGAGTTTAGACGAAGTGCCTTCAAACAGAAGGAAAAGTAGCAAACCTCGGAAAATAGAAAGAGACATGGCACTGGAGGGATCTTATGCTATGGAAGACGGTTCGTCACAAGACCGTGGGTACCAAGGCAGTACTGATGTGGTACAGTGCTGTTTCTTATGTGGGGAAAGGTTTTCAGAAGCAAGTTTATTTGGCAAACATCTTTTAGAAGTTCATAATTATGAAGGACCAATTAACAATTTACAAAATGAATATGTAGAGGGAGAGTTTATGGAGAGTATGATGGAAGCAGAGACTGTGTTTTGTTGTGAAATCTGCATTCGTGAGTTCAACGACCGGGCAAGTTTGTGGCTACATATGTTATATTCTCACAAAGATGCAGCTTCAAAAGCTTGCGGAATTTGCCTGAAGATATGCACGGACAATGAAAGTTTGATACAACATGTGGACACGTGTCATCCTCGGAGTAAGACAGACCAAAGGCGGTACAGCTGCCAGGTGTGTGCACGGCAACATGACTCTAGGAAGAAGCTGGTGTCGCATGCCAAGATCCATAAACTGACGGACGGTGAGGGGCGGCTGGTAGACCCGGAGACTGTGGTAGTGCAGAACAGCGAGTACTACGGCGGAGAGCTCAACACGAACCCGTCCTCAGCTGCCGCACTCCAGCCCTCCACCATGCAGTCCCCTTTCATGCCCAGCTGCGATGTTTGCTTCAAAATATTTGAAACGGACGCTAAGTTGGCTAAACACAGAAGAGGTGCTCACCGGGACTCTCTGGGCCTCAATGGATCGGGATCAGGACCTCATCATTTCTACTTTGCCTGTGAAATTTGTGGATTGTCCCATTTGAACAGGACGGAAAGATGGAAACATATGGCGTCAACCCACGCGGGAGACCCTTCCGTAACGTGCGATATGGCCGAGTGTGGCAAAGTGTTCGCAACGAGTGCTATCAAGAATGAACATACCTTGACCCACCACGCTGCTCAGGGACAGTATCCGAATACCTGTGAGATCTGCGGTAAAATATGGAAAACCAGGGTAGAATATTGGAAACATATGATGGGGGTCCACTCGGACTGTCTGCCGTTTGTATGCGGGGTATGCCTTAAAGTGTTTAGTAATTTGAGCAACTTGGTGGATCACGTGAGAGGTACACATTGGCCTCTGGTAGGCGGCGACTTCTGTTGTGATATTTGTGGAAGGCCTTATTCGAAAGTGTCCAAAATGACACGACATCGTAAAGTCCATTACGTGCCCGACACCTCTCCTGAGCTTCAAGCGCTGTTGGAACATCCCAAGATTGATAGCGAAGTACACTTTCTTCAGCAACCATCCACCTTAGTGTGTGATCTTTGTGAGGGGAGTACTCATGAGTATGAAAATGTGGAAGAGTTGGGTAAACACCGTTTGGAAACTCATAATGTTATGCCTTGtgatttatgtacaaaatattacGGACGAACATCACATTTATGGAAACATGTTAATAAAATTCATAAAGGTCATCCGGATGTTACATGCCCCATTTGTCAGAGAACGTCTGCTTCTAAATTACATTTGGCCGCTCATATGGGAAAGCATCATCGCAACGAAGAGAAAAATGATCCAAACTCTAGCACAAATACAGGCTCAAAAATAGTTAATGGACTTCACACTTgcgaaaaatgtgaaaaaatatttagaaaagaaACACTCgttaaaaaacatataaaacattgTAAAGGTCCCAGACCACCACCGATGCCGCTTCCGCCGCCTGTCAACGGAATTTATACTTGTGAAAGATGTTCAAAATCATTCAACCAACGGAATATGCTCTACAAACACATGAAAGGGTCACATGTCACCTACAAATGTGAAATTTGCAGCATCAAAATTAATACGAAGACAGAACTTTACCAACATGTGAGCCAGGAGCATGGAGACCACCCAGACGTCAGATGCAATTATCAGGGGTGTAACGTCATCCTGAGGTGCAAAGCTGATCTAGAGCGGCACCAAAAGGGACATCGCACCCTCAGTGTTCAATTACACTATTGCATATTTTGTGCTGAACTCATTACTAGCAAGTTCAAGATGAGAAGACATCTGAAGGCGATGCATGGGAAGGAGACCAAGTGTTTGTGTTCACTCTGCCTTAAAGCATTCCCTGACTTCAGAGAGCTGAGAGAGCACGTGGAGTCACTTCACGGAGCCGCCCTCGAGAGAGGCTTCACTTGTCAGATCTGTGCCAAACCTTGCTCCAATAAGTCTAAACTAATGGAACATATTAAATATCATGGTACGCATTTCATACCATGTAAAATTTGCCTGAAGATATTTTCATCAAAAGAAGAACTGGATAATCATATCAATAACCACCCGGACAGCGGGGACGAGGAGGATCAGATAGAAGACGTTGACATTGACCCCAGCAGTATTCTGGATATTATCGGGGCCTCAACTTCTGACGTTAATATTACACTGGATGATAAAAACCTCGAAAAACGTAAAATTAAAAGTGATGACAGTACCGCTAGTCAGATTAAAAAGATTAAGACTGAAATTGAGTGTGACATTTGTTCAGATAAATTCAAATCAAATGCTGAATTGAGAAGACATACTAGAAATGTCCACAAGAAGAAAAATACTTCGCTACATTCAAGTGTATTATCTGAAAATATGGGTGAAGAGAATAGCTGGGAGCTTTCAATGGAAAGAGATCCGGATATGACATTCATGCACCAACTGGGTCTCATGCCAGACAATGAGAAAGCGGCCAAACTGAGGAACGCACGCAAAGTGTACAAAAACGATTATACGCCAAGTGAGTGCGAACTGTGTGGTAAGATCTGGCCAGCAAAGCGGCACCTGTGGCAGCACCTAGTGCGATTCCATCGGGAGGAGGCGGGAACGACATGCGGGGTCTGTGTGAAGCTATGTCCGGACTACGCCTGTTTGAGCGCCCACCTGGCCTTGGAGCATCCGGCCAACTTCGAGGGAGATGGCTCCGGGCTGAGCTGCAAGGTGTGCGGCAAGTACCACAATGCCAAAAGCAAGCTGCAGAACCACGCGGCCGTCCACCCGGGTCACGAGGCCAGGGCCCTCCATAGCCAGCATCACTGCCTCATCTGCACGCATACCTTCGAGCAGTTTGGCAAGTTCTCTCATCACATACGGACCGAGCATAAAATAGAAGCCATTCCTACTAAACTGGACAGTATTACTAAGAATTTTGACAAACCACCAACCCCCGCTCGACAGGAGACCAAACTGCCATTCCATTCTTGTGATATATGCTCATTGGTATTTGCCAGTGAAATTGGTCTAACTAATCATAAGAGGATTCATGAAAATTCGGACAATTTTAAATGTGGTCAATGTGGTGAAGTTTTCCCTTCGGCTGAAACTCTTTGTACACATAAACTTCAAAAACACAAAGGTACTGAATTCGTTTGTGCGGATTGCAAATCAAATTTTTCAACGTACAATCAGTTGACTGAACACAATAAAGAATGTAAAATGAAAATGAGGAATATGACTGAAGCAAATTCTGACGATGACGACGAGGATATGCTGCTAGATGATGATATTGAAGAATTGCAGAATTCGTACGAAGCGAACGATACGAATGACCTGTCGTCAGTGTCTGATGGAGATGAAGAGAGGATTGAAGACGTGACGGAGGCCACGGAGGATGAGGAAGAGAGCCGGTGGGGGGAGGAGGAGGAAGATGAAGAAGGGTCGCTGATGTCACACGAAGAGCCCCGCGCTGTGGAAGTGTTCCTCTGCGACAGTACCGTCGAAGTAGTTCAGGTCGACCTCTCTGACGACGGATCCAACTCTAAAGTTAACTAA
- Protein Sequence
- MNESPLQNYEELCRLCASYDAIKVPIFSEQGKERSLRDKITTCLPFEVSEDDLYPKSLCYRCIYNLENFYDFRRGCIDARARLESVIKQFLKQESEEFPPRLEDDIVESDNEDVPNPADFLEACLGESPQENNEDEGPLSCKVCGRLFNSKSSLTIHAKFHQDCGGGPESERDFACYVCDKVFSSKGHLALHSKVHIGETATSSTLAHYTKSSASSLPRLYQCDLCHKSYSMAKHLWGHVSTAHKGHPLVTCCLCQRTFSSVANLEDHKRVKHKGENMVTTNGDLDGDLDGSASDKKLSLDEVPSNRRKSSKPRKIERDMALEGSYAMEDGSSQDRGYQGSTDVVQCCFLCGERFSEASLFGKHLLEVHNYEGPINNLQNEYVEGEFMESMMEAETVFCCEICIREFNDRASLWLHMLYSHKDAASKACGICLKICTDNESLIQHVDTCHPRSKTDQRRYSCQVCARQHDSRKKLVSHAKIHKLTDGEGRLVDPETVVVQNSEYYGGELNTNPSSAAALQPSTMQSPFMPSCDVCFKIFETDAKLAKHRRGAHRDSLGLNGSGSGPHHFYFACEICGLSHLNRTERWKHMASTHAGDPSVTCDMAECGKVFATSAIKNEHTLTHHAAQGQYPNTCEICGKIWKTRVEYWKHMMGVHSDCLPFVCGVCLKVFSNLSNLVDHVRGTHWPLVGGDFCCDICGRPYSKVSKMTRHRKVHYVPDTSPELQALLEHPKIDSEVHFLQQPSTLVCDLCEGSTHEYENVEELGKHRLETHNVMPCDLCTKYYGRTSHLWKHVNKIHKGHPDVTCPICQRTSASKLHLAAHMGKHHRNEEKNDPNSSTNTGSKIVNGLHTCEKCEKIFRKETLVKKHIKHCKGPRPPPMPLPPPVNGIYTCERCSKSFNQRNMLYKHMKGSHVTYKCEICSIKINTKTELYQHVSQEHGDHPDVRCNYQGCNVILRCKADLERHQKGHRTLSVQLHYCIFCAELITSKFKMRRHLKAMHGKETKCLCSLCLKAFPDFRELREHVESLHGAALERGFTCQICAKPCSNKSKLMEHIKYHGTHFIPCKICLKIFSSKEELDNHINNHPDSGDEEDQIEDVDIDPSSILDIIGASTSDVNITLDDKNLEKRKIKSDDSTASQIKKIKTEIECDICSDKFKSNAELRRHTRNVHKKKNTSLHSSVLSENMGEENSWELSMERDPDMTFMHQLGLMPDNEKAAKLRNARKVYKNDYTPSECELCGKIWPAKRHLWQHLVRFHREEAGTTCGVCVKLCPDYACLSAHLALEHPANFEGDGSGLSCKVCGKYHNAKSKLQNHAAVHPGHEARALHSQHHCLICTHTFEQFGKFSHHIRTEHKIEAIPTKLDSITKNFDKPPTPARQETKLPFHSCDICSLVFASEIGLTNHKRIHENSDNFKCGQCGEVFPSAETLCTHKLQKHKGTEFVCADCKSNFSTYNQLTEHNKECKMKMRNMTEANSDDDDEDMLLDDDIEELQNSYEANDTNDLSSVSDGDEERIEDVTEATEDEEESRWGEEEEDEEGSLMSHEEPRAVEVFLCDSTVEVVQVDLSDDGSNSKVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -