Adep018352.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- -
- Assembly
- GCA_963662175.1
- Location
- OY759217.1:28053883-28055727[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-08 6.4e-05 24.0 0.0 1 41 18 59 18 61 0.94
Sequence Information
- Coding Sequence
- ATGGGGAGGGAACGAATTAAGAAGCTAGGCACTCGACCTTATCGTAACTATGATGAGACGAAACTGCAACAGTGTTTGGAGGCAGTGCGCACGGGCAACATGACGCATCGTGAGGCTTCTGCGATTTTCAAAATACCaagaaaaactattttcaaCAAACTAAAGAACCGGCATACAAACCAACCGGGCTGTCCTCCCGTATTTTCAGAAAAGGAGGAGAAGTTAATTGTATGGTGTCTCACACAAATGGCAGAATATGGGTTCCCTGTCTCGGATCGTGATTTGTGCTGGATAATTGCTGATTATTTGCGTCAGCTTGGTAGAGAGGTGCCAAAATTCACCAATAACAAACCAGGAAGAGATTGGATAGAGGGGTTCAAGCGTCGAAACAGTGAAATTACTTCCAGATTGGCATCCAACATAAAACGAAACAGAGCAGCAGTGACCGTTTCAGATCTGAAGAATTTCATAAACAATCTGTCTCAGGAGCTAGAGGGCGTCCCCccctcaaatatatttaattttgatgaGACGTGCCTCGTTGACGACCCTGGTAAAAAAAGAGTTTTGGTCAGGAGGGGGACTAAATATGTTGACAAAATCTGCAACACTTCAAAAAGTGGAACATCAATTATGTTTTGTGGCAGTGCTTCAGGTGAGTTGTTGCCACCGTACATTCTCTACAAATCAGGTTGCATGTGGACAACATGGACAGAGAATGGTCCACCAAATGCCCGCTACAATAATAGTCAAAGCGGGTGGTTTGATGCGTCTACATTCTTGGATTGGTTTCAATCACTTTTTCTTCCATTTGTTCGTCATCTAGATGGAAAAAAAGTCGTCCTTTGTGACAACCTAAGCTCTCACATTTCTGTCAAAGTCTTACAGGAGTGTGAGAGGCACAACATATCATTTATATGCCTCCCTCCCAACAGCACACACCTAACCCAACCTCTTGATGTCTCCGTGTTTAGGGGGATTAAGGCAGAATGGAGGAAACTGTTGGCTGAGTGGAAGGACAACATTGGTAATGTCGCTCTCCGTAAGGAGGAATTCCCTCGTTTGCTCAACAAGCTCATGAAGAACATTGAGGACAATGTCTCCAACAACTTGATTTCTGGATTCAAAGCATGCGGAATCGTTCCTTGCGATGTTGGACCACTGCTGAAGAGAATTCCAGGAACTGTGGATAGCGAGGGAGATCAGGTCATTTCTCCAGGAGATTCTTTCTTGAAAAGACTGGAAGCTAAAAGAGCCGAATGGACGGAAAAGAAGAAAGgagggaaaagaaaaaaaatggacgTCCCACCTGGCAAGAGCGTGACATCAGAAGACGTCGAGCCATCATGTGCTTCCACCTCTCAAACACCTGCTTCAAAAGGTGCTAGTGGGAGGAAAAGAGTGGCTTCCATTGAAGAAGGCGAGGATGAGGAGAGGGATGAAGATCTCATCATTACTCAGGACGAGTCCGAGGACGATGATTTCGACAGGTTCAGGGAACAAATTGAACAAGAAGAACGTGAAGATGAGGAGTTTGACAGATTGCTCACAGAACAAAAGAGTGTTGATTTTGCACCAGTTGAAAAAAAAGTCGGGAAGTTCTGTGTGGTGAAATACATGGACAAAATATATCCTGGAAAAATTCTGAGTTTTGATGAGGACACTGCTGAGATTTCTTCAATGGAACAGAGTTTAAAATCTTGGAAGTGGCCCACAATACCCGACGTCATAGATTACTCTTGGAATGATGTCTTGGGAAGAATCAACGCCCCACAGCTAATTTCAAAAAGAGGATTCTACAGGGTGTCAGAGTTAGACAGGTTTTCTGCGTTCCAGCAGCCTTAG
- Protein Sequence
- MGRERIKKLGTRPYRNYDETKLQQCLEAVRTGNMTHREASAIFKIPRKTIFNKLKNRHTNQPGCPPVFSEKEEKLIVWCLTQMAEYGFPVSDRDLCWIIADYLRQLGREVPKFTNNKPGRDWIEGFKRRNSEITSRLASNIKRNRAAVTVSDLKNFINNLSQELEGVPPSNIFNFDETCLVDDPGKKRVLVRRGTKYVDKICNTSKSGTSIMFCGSASGELLPPYILYKSGCMWTTWTENGPPNARYNNSQSGWFDASTFLDWFQSLFLPFVRHLDGKKVVLCDNLSSHISVKVLQECERHNISFICLPPNSTHLTQPLDVSVFRGIKAEWRKLLAEWKDNIGNVALRKEEFPRLLNKLMKNIEDNVSNNLISGFKACGIVPCDVGPLLKRIPGTVDSEGDQVISPGDSFLKRLEAKRAEWTEKKKGGKRKKMDVPPGKSVTSEDVEPSCASTSQTPASKGASGRKRVASIEEGEDEERDEDLIITQDESEDDDFDRFREQIEQEEREDEEFDRLLTEQKSVDFAPVEKKVGKFCVVKYMDKIYPGKILSFDEDTAEISSMEQSLKSWKWPTIPDVIDYSWNDVLGRINAPQLISKRGFYRVSELDRFSAFQQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154434;
- 90% Identity
- iTF_00154435; iTF_00154437; iTF_00154438;
- 80% Identity
- iTF_00154437; iTF_00154438;