Adep041942.2
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- lov
- Assembly
- GCA_963662175.1
- Location
- OY759225.1:25817665-25842464[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-18 6.5e-15 56.0 0.0 1 44 353 396 353 397 0.96
Sequence Information
- Coding Sequence
- ATGAGTTCGGCTCACTACTCACTCCGGTGGAACAACCATCAGAGCCATCTTCTGACTGCCTTCGACTCCCTCCTACAGAATGAGACCCTCGTCGATGTCACCCTTGTCTGTGAGGAGTCCAGTTTCAAAGCGCACAAAGTTGTCCTCTCCGCTTGCAGTCCCTACTTCCAACGAATCTTCTCGGAGACGCCGTGCAAACACCCGGTGATCGTACTGAAAGACTTACGAGGATGGGAAGTGCAGGCAATTGTGGACTTTATGTACCGAGGGGAGATCAGTGTGGGACAAGAACAACTGAGCTCCCTCATCAAAGCTGCCGAGTCCTTACAGGTTCGGGGCTTGGCGCACACAGAACGAATCCCCGTCTGCGAACCAGAGAAAGACACAACACCCACTCGAGAGAGGTACTCTCCTCCACAGAGCTACGACAGTCGGCTTCCTCATCTGCCTAACATTTCCTTCAGTGAGGCGACAACAGGACGACATTGTTCCTCGCCCATTCCCAGGCGGAAACAGGCACGCCCTAGGCGTCGTTCCGGTGACACAAGTGTTCCACAAGACCTTCGAAAAAGTCCAGAACCAAGAGATTCTAGGGGACCAGAAATAGCTGAAAATTTGAGTATGAAGAAACCAAACAGGCAGGGATCCACTCCAACGTCTCCTCAAGTCAACatgAAAATGGAGAGTGACGACTCAGAACCTCCGGATTCGAGCCAGTCGCACCCAGTAGAGCTCACGACAGGCTCACAGGAACCCAGGATAGACTTTAACAGTACTGACCCTCATATGGGGCCTCTACATCCTTCTCATCATGATTCTCCACTCGAAAATTCTTTTCCACATTTAGCATCGATTTCAGCGCTGTCCCTAACACCACCCCACATGTTTACACTGGACTCACAACTTGGACTGTTCCCTGGAATGGAAAACTGTCGCAACCCTCTTCTCAACGATCTTTCAGATCAGAGGCTGGACAATCACATCTCAAGCAAaaagaaaatgggTCGGCCGAAGGGGCAGCACAGCGCTCCAAGAGGCGGCCCTCCTCGATCCTGGACTAACGCAGAGCTGACAGAAGCACTCCAACACGTCTGGAATAAGAAAATGACGACCTCACAAGCATCAAGGATCTTCGGGATCCCGTACAACAGTCTACTGATGTACGTTCGGGGCAAGTATGGTAAATCGTTAAAACTGGAACAATTGAAGAAGGAATGTTTCGGGGAACTGGGCGGTCCTCTGGACATCCTCGGTCTGGGGAATTTATCCACAAATAATAACAATCCAAGTAAACCGCCCAAAATGCCCGAACCTGACCTTATGTTAGGACCACCAGGCTTTAATCCTAGCCACTACCCAGGAGCCAATTTCTATCCAGATTTTGGCGCTTCATTTCCCGTCCCTGTTGGCATGGTACATCTTTTGCCTCAGTCGGAGAAGAACCGAGAGCCTGTCGACTATGCCAAGGAAGAGTCAAGAGCTACCCCTTTGGACTATCAGAAGGAGGATATGCGCAATTCACCAATGGCGCTAGATTTTGTCAAAGAGGAACAACATGGCAACAATTGCATAGACAACGACAACTCCAACAGTCCACGAGCTCGCGAGATACAGCAAGCGCACAATGGTCAGGATTGA
- Protein Sequence
- MSSAHYSLRWNNHQSHLLTAFDSLLQNETLVDVTLVCEESSFKAHKVVLSACSPYFQRIFSETPCKHPVIVLKDLRGWEVQAIVDFMYRGEISVGQEQLSSLIKAAESLQVRGLAHTERIPVCEPEKDTTPTRERYSPPQSYDSRLPHLPNISFSEATTGRHCSSPIPRRKQARPRRRSGDTSVPQDLRKSPEPRDSRGPEIAENLSMKKPNRQGSTPTSPQVNMKMESDDSEPPDSSQSHPVELTTGSQEPRIDFNSTDPHMGPLHPSHHDSPLENSFPHLASISALSLTPPHMFTLDSQLGLFPGMENCRNPLLNDLSDQRLDNHISSKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGELGGPLDILGLGNLSTNNNNPSKPPKMPEPDLMLGPPGFNPSHYPGANFYPDFGASFPVPVGMVHLLPQSEKNREPVDYAKEESRATPLDYQKEDMRNSPMALDFVKEEQHGNNCIDNDNSNSPRAREIQQAHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298288;
- 90% Identity
- iTF_00154620;
- 80% Identity
- iTF_00154620;