Adep014302.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- bab1
- Assembly
- GCA_963662175.1
- Location
- OY759216.1:28093343-28101213[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-06 0.0025 18.9 0.0 3 38 191 226 189 230 0.85 2 3 3.8e-13 5.8e-10 40.1 0.0 8 44 246 281 244 282 0.96 3 3 7.7e-11 1.2e-07 32.8 0.1 4 39 331 366 328 369 0.93
Sequence Information
- Coding Sequence
- ATGAGCTCGCCTCAGCATTATTATATGAAGTGGGACAACTACCATAATCATTTAGGCAATTTTTTTTCGAATCTTTATGAATCTGAAGAATTAGCCGATGTGTCTATATGTGCAGACGGTCACATTTTTAAATGTCATAGAATTATTTTGTCCGCTGGAAGCCCATATTTTCAGGAGATCTTAAACAATGTTCCTTGTAAGCATCCTGTCGTTATATTGAGTGGCATCAAAGTTGATGATGTTAGagttattataaactttatttacaAAGGAGAATTAGTTAACATTGACCACGATCAATTCGTTTCTGTTTTAAAGGCTGCGGAATCGTTGAAAATTCATGGGTTAGCTGAGATTATTAATCACCTACCTGCCTATAGAGAGGAAGAAACAGGGCTTTGTGATCCTTGTGAAGTAATCATTGAGAAGGACATTTTCTCTGAAAAATGTCAAGTTTACGATTCTATCGAAGATTCAAAAAGCGTAGAGAGTTTAGACGACAAAGAGAAGAGCTTAGAAAATACATTAGAGAAAAGAAGACGCTTAAAAGATGGCAAAAAGTACAGtgaAGGAAGTTTATACAAGGCCCTTGGAGACATGGAGCGAGGTGTTAGCCTGATGGAGGCTTCACGAGTCCACAAGATCCCCCGTTCAACACTCTACTCCAAGGCCAAGCAGCACTCTGGACTGTCCATCGTCACCAGGAAGGAACACTCCACGCAGGAGTGTCATCCAGCTCTTCAGGCTGTCGCCAatgGAATGAGCCTGAAACGTGCTTCCGAAGTGTTTAATATACCCAAAACTGTCCTCTGGAGGCGAGTCCAAAAATCGTATGAAGCCCAAGCTAAATGTAAATCAAGACAGAGGCATGGAAAGGAAGTTGAAGAAGTGCCTAATAAGATCGATCATCATCACCTAGTAGATGTGAATGGAGCCAAGAGGACCTCTGATCTGGCGGAAGACGGAGAATCGAAGTCACTGAAACAAGCCCGACTGTCGCAGGCGGTGAATGCTTGTAAGCAAGGCAAAATGTCACAAGCTGCTGCTTCCTCTACATTCCATgtGCCGAAGACAACTATATGGAGAAGATTACAAAAATCTTCAGATGGTGAAGATGTCGGTGTAGAGCAGGCAGAACCTGAGCACATCAAGGATCAGTCTTCTGATGAAGTTTTCTTTGAACTTCCTGGGGTGGCTGGCCGGGTGCTGCAGCCAGAACGTTTTGATAAGGCTGGGGGAAACATGGTGCACATCTTGAAACCATAA
- Protein Sequence
- MSSPQHYYMKWDNYHNHLGNFFSNLYESEELADVSICADGHIFKCHRIILSAGSPYFQEILNNVPCKHPVVILSGIKVDDVRVIINFIYKGELVNIDHDQFVSVLKAAESLKIHGLAEIINHLPAYREEETGLCDPCEVIIEKDIFSEKCQVYDSIEDSKSVESLDDKEKSLENTLEKRRRLKDGKKYSEGSLYKALGDMERGVSLMEASRVHKIPRSTLYSKAKQHSGLSIVTRKEHSTQECHPALQAVANGMSLKRASEVFNIPKTVLWRRVQKSYEAQAKCKSRQRHGKEVEEVPNKIDHHHLVDVNGAKRTSDLAEDGESKSLKQARLSQAVNACKQGKMSQAAASSTFHVPKTTIWRRLQKSSDGEDVGVEQAEPEHIKDQSSDEVFFELPGVAGRVLQPERFDKAGGNMVHILKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154641;
- 90% Identity
- iTF_00154641;
- 80% Identity
- iTF_00154641;