Adep030151.1
Basic Information
- Insect
- Aradus depressus
- Gene Symbol
- bab2
- Assembly
- GCA_963662175.1
- Location
- OY759220.1:39779392-39796414[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.1e-16 1.2e-12 48.7 0.1 2 40 392 431 391 434 0.90 2 4 2.6e-12 3.9e-09 37.5 0.1 1 39 445 483 445 486 0.95 3 4 1.2e-15 1.8e-12 48.2 0.0 2 45 501 545 500 545 0.98 4 4 2.5e-17 3.8e-14 53.5 0.1 2 42 553 594 552 595 0.96
Sequence Information
- Coding Sequence
- ATGTTCGCTATGTACAGCGGTACGGAGGAAGAGATGGCCGGGCAGCACTACTGCCTTCGTTGGAACAACTACCAGTCCAATATGACTTCTGTATTCCATCATCTGCTGAGGACGCAGGCTTTTGTGGACGTCACCCTTGCCTGTAATGATCAGTCCCTCAAAGCCCACAAGGTGGTGCTGTCGGCCTGCTCATCCTACTTCCAGAAGCTGCTCCTAGAGAACCCTTGTAAACATCCTACCATCATCATGCCACAAGATGTCTGCTTTGCTGAtctgaaatttattattgaaTTTGTTTACAAGGGGGAAATTGATGTTTCTCAGACACAGTTACAGTCTGTGCTGAAGACTGCGGACCAGCTGAAGATCAAGGGGCTGTGCGAGGTGCCGGAAGGTAAGGAGGGTGCAGAGGTGACCCCACTCCCTCCTCACCGCCGCTCTGCTCTCTCTCTTCGACAGCGGCGCCTTGCCAAGAGGCGGCTCCAGTACCGACAGAGGCTCGCCCGACAGGAAGCTTCATCCTCGTCTTCAAGACTCACCTCACATTTACACAACATCCACTCCCACTCCCACACCCTTTCTCATCGAGTGGCTACTCCAGAGCCAGTAGTGGCCACCTTCGAGGAGTCACCTCCCTGTCTGCCTGGACCTCTCACCCTGACCAACACCAGATTGGATGTGGGGACCTGCACCCAGGACACGAAGGACGTGGTGGTTGTGGCCGACACTGCAGCTATAGTCATGGCTCCCCCTTCCGCTGCTCTCGCTGCCCAACAGATCCCAACGCAGGTGGTGACGACAACGACGGCAGTGGACCCCACAGAGATGGACGAACCTTCTCCTCCTCCCATGGTCACCTCACTGGACCTACCTCAGGAAGCCACCCACAGGGATATTGCAGTTGATGCGAGCGACCTCGGGGTTGATGATGAAGATGAAGGTGTCAAAGTTAAATTCGAGACGTTGAGAGCCATCGACCAGCCTGACCATATGGATATGGACCAGCATCTCTCCGACAGGACAGTGCAGACGGTTGGAGAGGAGGGTATGCACACAATGATGATCACCCCTGAACTACTCGGCCTCATTCCTTCATCTCAATCAGAAGGTAGCGAGAGTGGGTGTGGGAAACTGGGCTCTGGCTCTGGAAATGGAGGCGGCAAGTCATGGCGCCAAGAAGACATGGAGGCGGCACTAGAGGCTCTCAGATCAGGAGCCATGTCTCTCAGCAAGGCCTCCGCCATCTACGGCATCCCCTCCACCACTCTCTGGCAGCGGGCTCACAGATTGGGTATCGAGACCCCTAAGAAGGACGGCCCTCTGAAGACCTGGACTGAAGACAGCTTGAACGTGGCCCTGGACGCTCTGAGAACCGGATCTATATCCGCCAACAAGGCCAGCAAAGCTTATGGTATCCCCAGCAGCACATTGTACAAGATCGCCCGGCGGGAAGGAATACGACTTGCAGCGCCATTCAATGCCGCGCCTACCTCTTGGGCCCCTGAGGACCTGGAGCGTGCACTCGACTCAATCCGCTCAGGCCAGTGCACTGTTCAGCGTGCTGCCGCCGAGTTCGGCATCCCTTCTGGCACCCTGTACGGCCGGTGCAAGAGGGAGGGCATTGAGCTGTCCAGAGCCAACCCGACCCCTTGGTCTGAAGCCGCCATGACACAAGCCCTAGATGCTGTCAGAGTTGGCCAAATGAGTATCAATCAAGCAGCCATCCACTTCAATCTGCCCTACTCTTCGTTGTATGGAAGGTTCAAACGGGGTAAGTACGAGGGGGGCGGAGGGGGTAGCAGTGGTGAGGAGACTGGCATTGGAGGCGGCTCCAATGGGGGAGTCGAGGGACCTGGAGGGGATACAGGAGGAGCAGTGGGGGGCGGTGAGCTGGTTACAGCAGCAGCAGCAACCACCCCCAGCCAGCAACAAGGACCCCCCTCTCACATCATGTTGGTACAATACCAACAACCGATCCACATGTACCAGCCCACCTGA
- Protein Sequence
- MFAMYSGTEEEMAGQHYCLRWNNYQSNMTSVFHHLLRTQAFVDVTLACNDQSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFADLKFIIEFVYKGEIDVSQTQLQSVLKTADQLKIKGLCEVPEGKEGAEVTPLPPHRRSALSLRQRRLAKRRLQYRQRLARQEASSSSSRLTSHLHNIHSHSHTLSHRVATPEPVVATFEESPPCLPGPLTLTNTRLDVGTCTQDTKDVVVVADTAAIVMAPPSAALAAQQIPTQVVTTTTAVDPTEMDEPSPPPMVTSLDLPQEATHRDIAVDASDLGVDDEDEGVKVKFETLRAIDQPDHMDMDQHLSDRTVQTVGEEGMHTMMITPELLGLIPSSQSEGSESGCGKLGSGSGNGGGKSWRQEDMEAALEALRSGAMSLSKASAIYGIPSTTLWQRAHRLGIETPKKDGPLKTWTEDSLNVALDALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWAPEDLERALDSIRSGQCTVQRAAAEFGIPSGTLYGRCKREGIELSRANPTPWSEAAMTQALDAVRVGQMSINQAAIHFNLPYSSLYGRFKRGKYEGGGGGSSGEETGIGGGSNGGVEGPGGDTGGAVGGGELVTAAAATTPSQQQGPPSHIMLVQYQQPIHMYQPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154622;
- 90% Identity
- iTF_00154622;
- 80% Identity
- iTF_00154622;