Basic Information

Gene Symbol
ct
Assembly
GCA_963662175.1
Location
OY759218.1:19404401-19423121[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.4e-27 7.3e-23 81.8 0.0 3 72 278 348 276 353 0.95
2 3 2.5e-31 4.1e-27 95.4 0.1 3 77 633 708 631 710 0.96
3 3 8.3e-31 1.4e-26 93.7 0.1 3 76 815 889 813 892 0.96

Sequence Information

Coding Sequence
ATGCGGCGAACTTCAGAAACTAGATTAGAAGATATTGTTatatCTCAGTTATTAGAAGATGTTCAACGCTTACAAAGCCGGATAGGAAAAATTCAAGAGGCGTCGGCAAATCAAATCGCTAGATTGGAAGAAGAATTGGAACACAAAAGACAGCAGATTTGTCGACTGGAGGCTCGATTGGAGGCTCAAAAGGACTATAACGACCTCAAAAGGCAGCTAAgCTGCATGCGGAATAGTGACGAGGCGTCCAAAGCGAGCGAGCAAGACGCTAAGGCTCATTCTGATCCATCCCAGAAACAAACCTCGGGAAATGCAACAAGCGAAACAGGTGATGTTCCCACTCTTCACAACGTTGAAACATTCGGATCTTTCCTCGGTGAAGAGATTGTAGCTAATTGGCGTCGATCACTTGAACGTACCATCGGAGCACCACCTGCCTCCTGGACGACCCAGGAAGAAGgtaaGAAGACCGATGAGAGCAGAGACCGGGAAATGGAAAAATCCGGATCTCCAACGAGGGAGCTTGTCAATGGTTCTTCGAGTCCAGCCGTCGCTTCCGAACAAGAATCAGTTGGAACCCCTATCCTTCCGAATGGTCTGTGCGGTCTGAACATTGGATTGAACAACAACGTGCTCACGAGCGCACCCAGTCTCAACCTGAATGATGTGATGAAAAGTCCGTTCAGATTTGATGAACGGTCCCCCTTCAGATTCAACGAAGACCCTGGCTGTATGGTTGGTCGATTTGGGGAATCTTTGATACCCAAAGGAGACCCCATGGAGGCCAGACTACAGGAAATGCTGAGgtACAATATGGACAAATATGCGAATCAAAATTTGGATACACTGTACATTGCCAGGCGGGTTCGAGAACTACTTTCGATACATAATGTAGGGCAAAGACTATTCGCAAAATATGTACTTGGACTTTCTCAAGGCACTGTGTCGGAGTTATTATCTAAGCCTAAACCTTGGGATAAGCTGACGGAAAAGGGTCGAGATTCTTATCGGAAGATGCACGCCTGGGCTTGCGATGACAATGCGGTTCTACTTCTCAAATCCCTCATTCCCAAGAAAGGCAAAGACGGGGCTGCATTGAATGTGATGTCTAGAGTCCCTGAGACAGATATAACAGAAGAAAGAATTGCTCACATTCTAAACGAAGCAAGTCATTTGATGAAGCCTCAGCCGCAAGATGACATTCATAGCAACGAAGACAGTAAATCACCACATCATCCTCAGGGTGCTGAATCCCCTTTGGGAAGAGACAACTCTCAAAGTCGAcgcttaaaaaaatatgaaaatgatGACATACCACAAGAGCAAGTTGTAAGGATCTATCAAGAAGAGCTGGCCAAGATCATGGGCAGAAGGCTTGAAGATCAAAGTTTCCCCGGgTTTGTTTTTCCTCATTTTCTGAGCGGTGGGAGTGGGGAGGACGTTCGACTGGCTATGGATGCGTACCATCGCGAACTTGCGAAGCTCAACGCGAACAGTGGCGGTCTTCCTCATCCCCTGGCAGCCCTCCATGTTCAGAACCTCTCATCTGCTGTTCAGAATGGTATCGCTCAGGATTTATCCTTACCAAAGCAAGTCAAAAGAGAGAAAGTCGTCTCAAATGAGGATGAAAAGGCAGAAGACGAAAGGCACGGTGGAAGTGCATTTTCGCTCGTTAGGCCAAAAGTCGAGCCTGgttCACCCCTGGGGAATGTGATTTTACCTCCTGAAGATGTTGGAACTGGGCCAGGCGCTGCGGCGGTGAGCCCTCTACAGCGAATGGCGTCCATCACGAATGCTCTTATATCCCAGCCCCCTTCGCAACATCACCATTCGCCGTCGCAAAGACCTCTCAAAGCGGTCCTTCCTCCGATCACTCAGCAACAGTTTGATCAATTCAACAATCTAAACACTGAGGAAATAGTAAGAAaggtaaAAGAGCAGCTGAGTCAATTTTCCATCAGTCAACGTCTATTCGGCGAATCAGTTCTGGGACTGTCTCAGGGAAGCGTCTCGGATCTGTTAGCTCGACCGAAACCATGGCATATGCTCACACAAAAAGGACGGGAGCCTTTCATCCGTATGAAAATGTTTCTGGAAGATGAAAATGCTGTTCATAAACTTGTTGCATCTCAATATAAAATAGCTCCAGAAAAACTGATGCGGACTGGAGGTTATGGAATAAATAccagTGGGGGTCCTCATGTGAAATCTATAGCTGCCAATTGTGCGAAATTTGTCAACAACGAAGCATTTCTTCATAATCCAAGTTTGCACATCCAGCAACACAATGCCCCAGTACCTCCTCCGGTGCCTCCTCCAACTCCACCAGATCTGAAGAAATCTGCAACCCCTCAGCAGTGTCAGACCCCTATTCAACAATACCCCGCCCTCAAGAACATGACCCATGTCACCCCATCAGTCTACGAAATGGCGGCTCTCACACAAGATTTGGATACGCAGTCCATCACCACCAAAATAAAAGAAGCACTATTGGCAAATAACATCGGGCAAAAGatattcGGTGAAGCAGTATTGGGTTTATCACAAGGCTCAGTTAGTGAAATGTTGTCCAAACCAAAGCCATGGCATATGCTGAGTATTAAGGGAAGGGAACCCTTTATCCGAATGCAGTTGTGGCTATCTGACACAAACAACATCGACAAACTGCAAGCTATAAAAACGGAACGACGAGAACTGAACAAAAGGCGCAGAGGATCTGGACAACAGGACAACAGTAGTGACACCTCCTCGAACGACACTTCAGAGTTTTATCATAGTAGCGCTGGAAGTCCGCCATATGCGAAGAAACATCGGGTGTTATTCTCTGAAGAACAGAAGGAAGCTTTGCGGATCGCATTTGCGCTGGACCCATATCCAAGTTTAGCGACTATAGAATTTCTAGCCAATGAACTAAGTTTAGTTTCTCGAACAATAACCAATTGGTTCCACAATCATCGAATGCGAATGAAACAAAATTCGCAATCTGAAACCCTTAATAGAGAAGGAGGTTCTGGATTTGATCCTGTGCAATTTAGGATACTTCTTAGTCAACGGCTAGGTCTTCCTTTACCCTTTACTGCTCCTTATTTTCAATCGAGTAGTGATTTATCTAGCATAATTTCTCGGAGTTCAATTCCGTTAAGGGAGCAAGGGTTGGATCTTTCGATAAAACATGAACCAGAGGGAGAGGACAATGAAAGTCATGTGGATTCAGAGGATTCTTATACAGGGATTCCCGAAGCCCGTGTTCCAGAACCTAGGAGCTCTAGGAGGAAACCTGCAGCGCCTCAGTGGGTGAACCCGGACTGGCAGCAAGAACCGGAAGTCATCATCAACGGGGTTTGTGTGATGCAGACTGAGGACTTCGACCGGGAAGGTAGAGAGGAGACAGTCCGGGTGGAACCTACACCAGTACCTGAAGAACGGAGTTCAACCCCAGATCAAACCCCCGACGGCTCCGCAGAAGACACCAAACCCTCCATTTCAGTGAAACAGGAACTGAAGGAAGAAAAGTGGGAAAACCAGTATTGA
Protein Sequence
MRRTSETRLEDIVISQLLEDVQRLQSRIGKIQEASANQIARLEEELEHKRQQICRLEARLEAQKDYNDLKRQLSCMRNSDEASKASEQDAKAHSDPSQKQTSGNATSETGDVPTLHNVETFGSFLGEEIVANWRRSLERTIGAPPASWTTQEEGKKTDESRDREMEKSGSPTRELVNGSSSPAVASEQESVGTPILPNGLCGLNIGLNNNVLTSAPSLNLNDVMKSPFRFDERSPFRFNEDPGCMVGRFGESLIPKGDPMEARLQEMLRYNMDKYANQNLDTLYIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVLLLKSLIPKKGKDGAALNVMSRVPETDITEERIAHILNEASHLMKPQPQDDIHSNEDSKSPHHPQGAESPLGRDNSQSRRLKKYENDDIPQEQVVRIYQEELAKIMGRRLEDQSFPGFVFPHFLSGGSGEDVRLAMDAYHRELAKLNANSGGLPHPLAALHVQNLSSAVQNGIAQDLSLPKQVKREKVVSNEDEKAEDERHGGSAFSLVRPKVEPGSPLGNVILPPEDVGTGPGAAAVSPLQRMASITNALISQPPSQHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGINTSGGPHVKSIAANCAKFVNNEAFLHNPSLHIQQHNAPVPPPVPPPTPPDLKKSATPQQCQTPIQQYPALKNMTHVTPSVYEMAALTQDLDTQSITTKIKEALLANNIGQKIFGEAVLGLSQGSVSEMLSKPKPWHMLSIKGREPFIRMQLWLSDTNNIDKLQAIKTERRELNKRRRGSGQQDNSSDTSSNDTSEFYHSSAGSPPYAKKHRVLFSEEQKEALRIAFALDPYPSLATIEFLANELSLVSRTITNWFHNHRMRMKQNSQSETLNREGGSGFDPVQFRILLSQRLGLPLPFTAPYFQSSSDLSSIISRSSIPLREQGLDLSIKHEPEGEDNESHVDSEDSYTGIPEARVPEPRSSRRKPAAPQWVNPDWQQEPEVIINGVCVMQTEDFDREGREETVRVEPTPVPEERSSTPDQTPDGSAEDTKPSISVKQELKEEKWENQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2