Alei071756.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- -
- Assembly
- GCA_035610365.1
- Location
- CM069435.1:76997223-76998279[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.44 1.8e+04 -1.5 1.4 14 19 162 167 162 167 0.86 2 5 0.004 1.6e+02 5.1 2.1 4 12 198 206 197 206 0.94 3 5 1.5e-08 0.00059 22.5 17.0 1 19 212 229 212 229 0.99 4 5 1.2 5e+04 -2.9 0.5 15 18 255 259 254 262 0.62 5 5 2.4e-07 0.0098 18.5 15.0 1 18 265 282 264 283 0.93
Sequence Information
- Coding Sequence
- atgcacggGAAGAATAAACAACCAATAAGTGCCTGGTTTAAAAAGGATGCTCGAGTAAACAACCAGCAAGTAAAACAAACCAAAACTAATAATTCGGAAATGAAATTTAAGCAAGCACACGATAAATTACAAGAGGCTGTTAAAAGACATACCAAAGACTATGACTCGTCTTCAGAGGAAGAAGAATTACAAATTAATGATATTATAGAAAGTACTTTTAAATCATATGCCCGAAGTGGAGGAACAAACGATAGTTTATGTAGAACGAATCTATTTTTAACAGATTCTGTTACTTCTGGTTCTAAGATATGTGTTATCTGTATATCGTCGGTTAAAAGAACCGATAAGGTGTGGAATTGCGAAGGATGCTTCTCCGTATTTCACTTAATGTGTATACAGCGTTGGTCTAAAGATAAGGTAGTACAATTAAAACAGTCACTTAGTGATGGGATTCCAACTaagatcaatttaaaaattgtttgggATTGTCCTAAGTGTAGACAAGAATATGATCCATCTAATATTCCTGATAAATATTTatgcttttgtaaaaaaactgaaaatccTATCTTTCAACCTTTGTTAGTGCCTCATTCCTGTGGTGAAGCTTGCCATAAAGATTTACAACCTCTCTGTGGGCATAAGTGTCTTTTACTTTGTCATCCTGGTCCTTGTCCACCATGTCCTCAAACAGTTAATGTTACTTGTTATTGTCGAAGACGACCACCAAGGACACAAAGATGTAACAATAAAGAATGGTCTTGTGGCACGCCGTGTGAAAAAAAACTATCTTGTAAAAACCATAAATGTGGTCTGCCTTGTCATCCAGGTGAATGTCCACCGTGCCTTAAGAAAAGCATACAAAAGTGCGTGTGTGGAGCGAAGAGCAAATTGAGGGACTGTTCTACACCAATTTGGGAATGTGAACAGGTAATAAATTGTTCTtgtagtttttga
- Protein Sequence
- MHGKNKQPISAWFKKDARVNNQQVKQTKTNNSEMKFKQAHDKLQEAVKRHTKDYDSSSEEEELQINDIIESTFKSYARSGGTNDSLCRTNLFLTDSVTSGSKICVICISSVKRTDKVWNCEGCFSVFHLMCIQRWSKDKVVQLKQSLSDGIPTKINLKIVWDCPKCRQEYDPSNIPDKYLCFCKKTENPIFQPLLVPHSCGEACHKDLQPLCGHKCLLLCHPGPCPPCPQTVNVTCYCRRRPPRTQRCNNKEWSCGTPCEKKLSCKNHKCGLPCHPGECPPCLKKSIQKCVCGAKSKLRDCSTPIWECEQVINCSCSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -