Alei060250.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- stc
- Assembly
- GCA_035610365.1
- Location
- CM069434.1:91450577-91454842[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.9 1.2e+05 -4.1 1.6 15 19 337 341 336 341 0.81 2 14 1e-05 0.41 13.4 16.2 1 19 383 400 370 400 0.90 3 14 0.37 1.5e+04 -1.2 1.7 5 10 425 430 425 430 0.96 4 14 2.7e-08 0.0011 21.6 11.9 1 19 436 454 436 454 0.93 5 14 1.1e-06 0.043 16.5 12.6 3 19 496 512 484 512 0.89 6 14 0.88 3.5e+04 -2.4 0.2 3 6 518 521 518 522 0.80 7 14 2.7e-05 1.1 12.0 11.7 4 19 559 574 552 574 0.87 8 14 1.9 7.9e+04 -3.5 2.0 5 10 603 608 603 608 0.93 9 14 0.0089 3.6e+02 4.0 9.5 1 11 614 624 614 636 0.91 10 14 3.5e-10 1.4e-05 27.6 11.8 1 19 641 659 641 659 0.98 11 14 1.5 6e+04 -3.1 1.2 6 10 688 692 687 692 0.91 12 14 8.8e-05 3.6 10.4 9.4 10 19 706 715 700 715 0.91 13 14 1.7e-07 0.0067 19.1 18.5 1 18 751 769 751 773 0.96 14 14 0.0047 1.9e+02 4.8 17.9 1 18 780 798 780 799 0.93
Sequence Information
- Coding Sequence
- ATGTCCTATTTGAGATCGACCTCTCCACAAAGGCCTTTCCAAGAAGGCAACAACAGTTATAGTAATTCATCATTTAACGTAACGACACCTCATTACAACAATGAACGCAATTTTTCGAGTCGTTACTGTGGGCCAATTACTTCATCCAGTGCCTATGCTGCTACAACCACTTCTTCCACACATTCCCACAACATGACCTTTGCCAACGGTTCAAGTAACTTTTCAGAACAACCACACTCATCTGTAGCATTCCAATCTAAGTTAACTCCGCTAGCGAATGAATTTAGACCTGGAAGTAGCGTACATGAAACTATAGAAAATGATAGTAAAAATTTAGGAGCAATTAGAAAAgaataccaaaacaaaaataaacgagTTTATAACGACAGGAGGTACAATAATAACGATAATTCATACAGTAGGAACAGAACCTTTTATCCTAACCAACGTAATTATTATAACGATTATGACAGAAATAATGAAAGAAAATTTAATCAAAAGGGTGGTGATGATACGGATAATCAAAGTTATAGTAGGAATAGAGATGTGGAGAAGAATAATGTTCGTAAAGAGTATAACATTAGAGTGAATAGGCCTAATGgttattataaaagtaacaataGTAGAAATTATAGAAACCCGAATAAGGATTATTACGATTACGATACGAGGAATACAGATAACGAGAGGTGGAAGAGGAATGGTATGGGCGAGACATCGAGTTAcgacaaaaaaaagtatgattatgaaaagaaaaaagtttctaGCGAAGGCAGTTTCGATAAGAAGAAATCTgaactcaagaatttaaaaaagaaatTGGATGCGGCTTCGCAAAGAGAACGTCTAGAGCAACTGATAATACGCCGTTTGTTGGAATGTCTGGTATGTTGCGAGAAACTTCGTCACACCGATCAAATTTGGTCGTGTAAACAATGCTATCACATATTACACTTGAACTGTACCATTCGTTGGGCCCAATCGTCGAAGTTAGAATCTGGTTGGCGATGTCCCGCTTGTCAAAACGTCTATCAAGATGTACCTAAAGAATATCGTTGCTACTGCGAAAAACAAGGTAATCCATCGTTAGATCCAGGTGGAATACCGCACAGTTGCGGTGCAATTTGTGGACGCAAAGGTCGTTCGTGCTCTCATAACTGCACTTTAGTGTGTCATCCTGGACCGTGTCCGGATTGTTCGGTAACGGTACCAAAATATTGCGGATGCGGAGCTACAAAACCAATCGTAAAGTGCAGTTCTAACGTTCCGATAACGTGTCAAAAATTATGCAACAAAATTCTCAACTGTGATATTCACAAATGCGACAGTAAATGCCACGAAGGTGATTGTCAACCATGTACCAATGTGTTAAAACAAGAATGTTACTGTGGTAAGGAAGGTCGTAAGGTTGAATGCACGAAGGATGCAAACGGCGAGGATCGTTACGAATGTGGGGAACCATGCGATAAGTTATTATCGTGTTTAAACCATAAATGCCAACGCAATTGTCACAGCGGACCTTGTAGCGCTTGTACAAAGTCGCCAAGTAAAATTCATACGTGCCCTTGTGGACAAACAGAATTGGTACAAGTTAGAAAATCGTGCCTTGATCCAATTCCTTGCTGTGATAAGATATGCTCAAAGAAATTAAACTGTGGCCAACCCAGTGTCCCACATCTGTGTAAGTTGTTATGTCATTCCGGAGCATGTACCCCTTGTCCTGGAACAACTTTAATACGTTGTCGGTGTGGCCATATGGATAAGGAGATACTGTGCACGGAATTGACTACAAAAGCTGACGATGCCCGGTGCGAGAAAAAGTGTGTTAAAAAACGTTTATGTGGAAAACACAAATGTAACCAATTCTGTTGTATCGAAATTGATCACATTTGTCCGTTACCCTGTAATCGACCACTCTCATGTGGCTTGCATAGGTGTATCGAACCTTGTCATAAAGGACGATGTCAACCATGTTGGCGTACTAGCTTTGAAGAATTATACTGCGAGTGTGGTTCTAGCGTTTTATATCCTCCAGTGGCGTGTGGAACCAGACCACCACCGTGCGAACAAATATGTTCTCGGACTCGTACTTGCGAACACGAAGCTCTCCATTCTTGTCATCCGGGACCTTGTCCGCCATGTACTGTTCTAACCAAGCGTTGGTGTCACGGTAAACACGAGCAACGTTCGACGATTCCATGCCATCAAAGCAACTTTAGTTGCGGTTTAGCCTGTGGGAAAAACATGTCTTGTGGAAAACATAAATGTCAGCAGCCTTGTCACGAAGGATCTTGCCGCATGCCGTGCAACCAACCGTGTATGGAAACTCGAAACGAATGCGGCCACCCATGCAATCAACCATGTCACCCACCTCCATGTCCAGAAACTTCTTGCAAACAAACTGTGCAGGTTACTTGTCCATGTGGGTTACGAAAAAGTTCTCGTGTTTGCGTCGACTTAATTGGAGAATACCAAATGATTGATATGTCGCAGCTTGCATTTAAAATGGAACAAATGCAGATGGGTCAACGAGTCGACGTTACCGATTTAGGTAGCTTAAAAAAAGGTCCTCTTAAAATatTAGAATGCAACGACGAGTGTCGATTGGTAGAACGAAACCGTCGGTTAGCAATAGGACTTCAAATACGAAACCCAGATTTGAGCGCAAAGCTAACTCCTCGATACTCCGAGTATATGCGAAGCTGGGCTAAGAAAGATCCGAAATTCTGTCAGCAAATTCACGATAAGTTATCAGAATTGGTACAATTGGCTAAACAGAGCAAACAGAAAAGTAGAGCGTATTCTTTTGAAACGATGAACCGCGACAAACGCCATTTCGTTCACGAATATTGTGAACATTTCGGTTGCGACAGTGCCGCTTATGATCCAGAACCGAATAGAAACGTCGTTGCGACAGCGTATAAGGATAAATCGTGGTTGCCCAGTTACAGTTTACTCGAAATTATTCAGAGAGAAAGTGGACAGAGGAAAGTTCCTGGGCCACAACAGCTTGGAAAAGGAATTGCGGCCAAGTCGGAAACGGTTTCTCTAAAATTGCCAGGTCGTATTCCACGACCTGCCACGCCGCCTGGCGAATATGTAGATTACTTTAATAATCCtccagaataa
- Protein Sequence
- MSYLRSTSPQRPFQEGNNSYSNSSFNVTTPHYNNERNFSSRYCGPITSSSAYAATTTSSTHSHNMTFANGSSNFSEQPHSSVAFQSKLTPLANEFRPGSSVHETIENDSKNLGAIRKEYQNKNKRVYNDRRYNNNDNSYSRNRTFYPNQRNYYNDYDRNNERKFNQKGGDDTDNQSYSRNRDVEKNNVRKEYNIRVNRPNGYYKSNNSRNYRNPNKDYYDYDTRNTDNERWKRNGMGETSSYDKKKYDYEKKKVSSEGSFDKKKSELKNLKKKLDAASQRERLEQLIIRRLLECLVCCEKLRHTDQIWSCKQCYHILHLNCTIRWAQSSKLESGWRCPACQNVYQDVPKEYRCYCEKQGNPSLDPGGIPHSCGAICGRKGRSCSHNCTLVCHPGPCPDCSVTVPKYCGCGATKPIVKCSSNVPITCQKLCNKILNCDIHKCDSKCHEGDCQPCTNVLKQECYCGKEGRKVECTKDANGEDRYECGEPCDKLLSCLNHKCQRNCHSGPCSACTKSPSKIHTCPCGQTELVQVRKSCLDPIPCCDKICSKKLNCGQPSVPHLCKLLCHSGACTPCPGTTLIRCRCGHMDKEILCTELTTKADDARCEKKCVKKRLCGKHKCNQFCCIEIDHICPLPCNRPLSCGLHRCIEPCHKGRCQPCWRTSFEELYCECGSSVLYPPVACGTRPPPCEQICSRTRTCEHEALHSCHPGPCPPCTVLTKRWCHGKHEQRSTIPCHQSNFSCGLACGKNMSCGKHKCQQPCHEGSCRMPCNQPCMETRNECGHPCNQPCHPPPCPETSCKQTVQVTCPCGLRKSSRVCVDLIGEYQMIDMSQLAFKMEQMQMGQRVDVTDLGSLKKGPLKILECNDECRLVERNRRLAIGLQIRNPDLSAKLTPRYSEYMRSWAKKDPKFCQQIHDKLSELVQLAKQSKQKSRAYSFETMNRDKRHFVHEYCEHFGCDSAAYDPEPNRNVVATAYKDKSWLPSYSLLEIIQRESGQRKVPGPQQLGKGIAAKSETVSLKLPGRIPRPATPPGEYVDYFNNPPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -