Alei033146.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- ZNF687
- Assembly
- GCA_035610365.1
- Location
- CM069433.1:13069246-13081218[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.1 2.5e+02 5.0 0.7 1 21 129 149 129 150 0.93 2 9 0.14 35 7.8 0.5 2 23 388 409 387 409 0.97 3 9 0.00027 0.064 16.3 0.0 1 20 415 434 415 436 0.95 4 9 0.014 3.3 11.0 0.3 2 23 448 471 447 471 0.94 5 9 0.06 14 9.0 2.0 2 23 477 498 476 498 0.97 6 9 4 9.7e+02 3.2 0.3 1 13 508 520 508 522 0.86 7 9 4.3 1e+03 3.1 2.1 1 21 540 560 540 561 0.93 8 9 0.00027 0.064 16.4 0.8 1 23 764 787 764 787 0.93 9 9 0.081 19 8.6 0.8 2 23 828 849 827 849 0.97
Sequence Information
- Coding Sequence
- ATGCCCAAAGCTGGTATCCTAAATGAGAGCCTAATTGATCTGCTTCAAGATCGATGCGGATCAAATAAGGAAAAGGTCACTAAAACACATGGCAGGAAAACAGAGCCCGGTAAACCGCTCAGGGTTGATGCACCTCAATCAAACCTATCTACAGATGAACCAGTCGCTGGCCCTTCAGGGACCCAGAGAAAGATTCTTACTAGTAGCGACGATGATAGTGACGACGAAACCGTTGCAAGTTTAGTTGCAGTTCCTAAAAAAATGCCAATAGGAAAGCAAGCAAAAAGGCCAACAAGGAACCCAAATTTGGCGAAATGGGATATACTCTTCGATAAGAAAATTGTCGAATGGATATCGTTCAAACCGCAACTTGGATTATACGTGTACCCTTGCTACGCTTGTCGTCATATGTTCGCCTCAAAAAACTCCTTCTTGGATCATGTCAACAGACGCGCGCTCGTGCTACGTTACAAATGCGCAGTCTGTGCGAAAGAATTAATGTTTTACAACCCGTGTTCGTTCTTACTGCACACTCGACAGCACTTTACGTTGTTAGGAGGGCAAATCGATTTAGAAAATTTACGAATTTCTATATTACCTTTTGGACTTGGAGGGTTTTTGCCCGACCCAAACGTACCACTTCTTTACGACGTCGATGAAGACGAAGCTGGTGAAATTTCGGTTCTCAACAGTCGGTTTTACAGCCCAATGCAAGAAACGATGGGGCGACCAATTATAAGCCTAATTCCTAACGAagttctgtttttgtttatggtgGAACCAAACGGTAGTTTGTCGTCTCTAGTGCTTAAGCAAATCAGTTCAACTATTCCTAAATGCAAATTCGTCGCTATGGATAACAATCGATTAAACCCAATCCCCTCCGGTTTAGATATTTACGGCAGAGAACTGTCAGATTCtaccaataacaataataataataacaatgaatctgtaattgaaattaaacaagAACCGGAAGAAGCGGACGAAAATCGGACGCAGTACGCTTGTCCCATTATCACTAAGATCGAAACTGTGAGAGAAAAAGACCACGACCAAGCGTCTTTTCCAAGTTGTCCTGAATGCGAATTAATAATACACGATAAGTCTATGGCCGAACACTTCTTAGATACAAATAAACCCTTTCGGGAACATTTAAAATGCAACGTGTGTAAATATATTGCACCGACGAATTGTTCGTTTGCAGCTCACGAACGCATACACAAAAACGAGCCTCCCTTCGTGTGTCCCGAATGCGGCAAAGACTTCGCGAACGGGGATTTATTGAAGTCTCATTTAGAAGAAATTTGTTTTCATCTGACGAAACAAGTTCGGTTGAAGTGTCCTGGGAAAAAATGTGGAAAAGTGTTTGCTCAAATTTTGACGTTTACAACTCATTTTGCGATGCATATGCGACGCTTGAATAAGTGTGCACATTGTCAGGAAGTGTTCCAAACCGATGCAGAGTATTTCCAACACAGAATGAAACATAATGTGAAAAGCTTACCTTCGCCCATTTTCGATTGCGCAGTATGTAAAGAAACTTTTAGCGAAAAGGCTTCTTCCGATCATATTTACGATCACGCCACAGATAAAAAACAATCCGTTTATGTGTACATATGTAGACATTGCCGTAGTTATTTTAGGTCAACGACTACATATGCTACGCATCTTCTACGTTGCTCAAAATTAGCTGCGCGTGTACAGTTACAAAATATCGTAAAAGGAAATCCTCCActagaaaagacaaaaaagaacCAAGTGTTATACATTTTGGATACGTGCCACGCGTGTAAAACGCAAATTAAAGCGCAGGTACCGAAAATTGACAATATGCCAGAAAATTGTCCGAATTGTTATCgacctttaaaaaacaaaaacgaaaacgtTTTGTTTACAACGAATAACGACACTGGTGTTAAGTGCGTTTTGTGCCAAGACACTTTAGATCCGTTGGAATTAGATAACCACTTTAACTCCgacaattgcaaatattttaaacctCTAATACCCTTACAGCACGTTGAAGTGAAAAGTCCAGGATCAGAAACAAGTCCGAGATTGGATTCCAATTGTAAAAAGAAACGAAGAAAACCGTGGACGATTTCACACagtagtaaacaaaaaagattgtCTGTAAGTTTTGAGCCCGAACCTATTAATCTCGAGGCTATCGAACCAACTCCTTTTGATGGAACTTATCATTGTAAATCGTGTTCTTTCAGTAGTAGCGCCAGAAACGAATTTCATCAACATATAGTGCAACATCGGAACATTAGTACGGCTTATCAATGTATGGAATGTGGAGAATGTTTTGTAGTTAAGCCGTCACTGGAAAAACATTTAGTGTATTACCATCAAATTAGCGACATCGACTCTTACTTCGACGAAAATGAGTGTTTCGATAAACAAGCGGTTAAAGAACTGGAAGATGTCATGCATTTAGCGCCCGGGGAGTCCAAAGATGTTGCACAAAATCAGTGCCGGGTGTGTTTACTATATTTTGATGATGAAAATGAACTGAGTAAACATTTCCGGACGCACGGTATGGCGTTTATACTAAAAAAGTCGaagtag
- Protein Sequence
- MPKAGILNESLIDLLQDRCGSNKEKVTKTHGRKTEPGKPLRVDAPQSNLSTDEPVAGPSGTQRKILTSSDDDSDDETVASLVAVPKKMPIGKQAKRPTRNPNLAKWDILFDKKIVEWISFKPQLGLYVYPCYACRHMFASKNSFLDHVNRRALVLRYKCAVCAKELMFYNPCSFLLHTRQHFTLLGGQIDLENLRISILPFGLGGFLPDPNVPLLYDVDEDEAGEISVLNSRFYSPMQETMGRPIISLIPNEVLFLFMVEPNGSLSSLVLKQISSTIPKCKFVAMDNNRLNPIPSGLDIYGRELSDSTNNNNNNNNESVIEIKQEPEEADENRTQYACPIITKIETVREKDHDQASFPSCPECELIIHDKSMAEHFLDTNKPFREHLKCNVCKYIAPTNCSFAAHERIHKNEPPFVCPECGKDFANGDLLKSHLEEICFHLTKQVRLKCPGKKCGKVFAQILTFTTHFAMHMRRLNKCAHCQEVFQTDAEYFQHRMKHNVKSLPSPIFDCAVCKETFSEKASSDHIYDHATDKKQSVYVYICRHCRSYFRSTTTYATHLLRCSKLAARVQLQNIVKGNPPLEKTKKNQVLYILDTCHACKTQIKAQVPKIDNMPENCPNCYRPLKNKNENVLFTTNNDTGVKCVLCQDTLDPLELDNHFNSDNCKYFKPLIPLQHVEVKSPGSETSPRLDSNCKKKRRKPWTISHSSKQKRLSVSFEPEPINLEAIEPTPFDGTYHCKSCSFSSSARNEFHQHIVQHRNISTAYQCMECGECFVVKPSLEKHLVYYHQISDIDSYFDENECFDKQAVKELEDVMHLAPGESKDVAQNQCRVCLLYFDDENELSKHFRTHGMAFILKKSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -