Alei007954.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- Hivep1
- Assembly
- GCA_035610365.1
- Location
- CM069432.1:61793724-61813700[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0004 0.095 15.8 0.8 1 23 249 271 249 271 0.98 2 8 0.012 2.8 11.2 4.4 1 21 277 297 277 301 0.89 3 8 0.13 31 7.9 0.3 2 21 507 526 506 527 0.93 4 8 1.8e-05 0.0044 20.0 2.2 1 23 1176 1198 1176 1198 0.99 5 8 5.5e-06 0.0013 21.7 4.8 1 23 1204 1228 1204 1228 0.92 6 8 3.6e-06 0.00086 22.2 1.0 3 23 1739 1759 1738 1759 0.97 7 8 0.011 2.6 11.3 1.7 1 23 1765 1789 1765 1789 0.91 8 8 0.0022 0.52 13.5 2.6 1 23 1807 1831 1807 1831 0.93
Sequence Information
- Coding Sequence
- ATGGAAACAAGTGCCGATagatatttacacaaaaaattcaagaaacaaTTGAACGTTGAACCTAACGTTAATCAAGAAGGAACAAGGAATGTTATTAAAAGAGTGCAAATTGGTGATTCATCACAAAATTATCGCAACAGTGAATTAGTTACTAATAATGTAGTGATTTCTggaatattttctaaaacgtgTGACGACATTTTAGTTACAACTAACAAAAAAGATGTGCCAAAACATAGTACAAatgataatattattaatgtttataatacGATAGCGTCGTCAAATGTAGCTAAGTCTTCCATATCACATTTAAATGTAGCTGAAAGACAAGAAAATAATATGATCGATAGAATAAAGCCAGTGGAAGAATCTGTAAATCCACAATCTTCAAACACTTGCATATCAtatgtaatttcaaaaaacagtaGAGTAGAAAATCGAAATAAACCAGAAGCCCATTTTAGAACTGCTAATTTTGATACGAGATATAATGTTTCAGAACCAATAGGTATCCCTACAGTTGGTACGTCTTCCATTTTagtagacaatgtttatatggATCAATACGTAACTTCAAAAATAGTACATGTAGATAAATTAGAGGACATATCCTCGAATTGTAGTGTAGCTAACAACGATATTATTCATCTTCAGGAAGGTTCTTGTAATATACTGGATGGTAGAGGCGAACAAAACTACTCTTCAGATTTTGCGTCTGTCGAAAAGGGTAGTGGTGGAAAGTATATTTGTTCCTACTGCAATTTAGCTTGTTCGAAACCGAGCGTTCTACAAAAACACATACGCGCTCATACCAACGAACGACCATACCCATGTGTTAGTTGCGGCTTTAGTTTTAAAACCAGATCGAACTTATACAAACATTGTCGATCTAGAACACACGCCAACAGAGTAATGGGGAACAAAGCTCAAGAAATCAATAGTGAAGCTGAAACAGACAGTCAGACTAAATTGGAACTGGACCAAAATAATTCGGTCGAATTAATACACGAagaaaatatttccaaaattcAAGAAGTAAATGAAAACGCTAATTTTAACAACGAACGATTAGGATTAGATATGCAAAAAAAGCCGTATAAACCGCGATTTCATAATTCTAaagcattttttgataatatattaACAGATAATCAAAAGAATATTGAAGATCAAAAAGTTCCGGAAACCGTCCAGAATAAACCTTCAAATTCTGAGTTGTTATCTTTACACATTAAtgatgtaataaacaaaaacaacgcTATTGTTAATTCGAACGAATCGTACCTAATACGAAAACGGTCTGTTGATAATAGTTATCTAGAAAATGTTAATACTAATGGATTTGTTCATCATCGTGCTAACGAAGTTATGAATTCTTTGGAAGAACGCAACGACGAACCTCTTAATTTGACTAATAAAACTCGCAAGCGTTGTATGAGCGAAGTAATGGAACCTACAATGCACAAAAGTTTAATCAAAgaactacttttaaaaaatctttacgCAGATTCGATGCAATGTCCACATTGTAAAATGATCTTTCAGACTGTTACCGAACTTGAATTACATAAAATGAGGAGTTGTAAAGGTTACACCAAATCGGGTGCTAAGTATAACCGAAGTAGTTCTGTAAACGTTGcatcaattttaacaaaaaataaaaacgcgtTTGATTCTATTTCGTATTTGCAAAGTTCTACGTTTCCTTTAAAATCGCCTGGTCCTTTTTTGGGAAATACTCGACTAGTAGAAAGCGACAAAGGcaaatctttttcttttgacGATAGTTTTGCGAAGTTTCAAAATAGTTTACAAAATCCCAATGTTTTAAAATCTACTTTATCGTATTCGCTGTCACCGCTGCACTTCGAAAATGATCGAAATAAGAAAACTCCAGTTAAGCTATTTGGTGGTGAAGTTAAAATATCTCAAACGACGGGaacgaaaagttttaaaattgatagTAAAGACAGTGGCGACAGATACGTAAGCGAACAGTTTTTGGACAGTGGCGAAAGGTTAAGTGAGAATAGAGTAGTTAAATCGAGTTTGCAATCAGGCGGAACTGTTCTTCAAAATAAATctgattataataataaacaagatgTTCTTAGATCTCCATCGGACGTTATTAGAATGTACGATAATCGAGAGCTTTCTTCCAGTATAGACTTAGTTAATTTAGAtaagaacaaatttaattatactaatCAAAATCATCATTATACTGAATCAAAATCGAATTTGGAATCGTTAAGATGTTCAGAAAATATTATACATTCGGATACGATTAATTCAATGACCACTTCTTATAAGTATACGAATATTATGGATTTTAGCCAAAAAGCTGTAAATCTACTTGCACCAAATTTAAAGCAACCTAATTTAACTATACCTGGAGTTCCTATGCCAGTGTCTTCTAAACTTACGTTGTCACATTCGCCAATCTTACATATGGACGTGAGCAAACCAGAAACTACTAAACTGCCAAGTGGATTGTTACAGTCTGAAATAGAATCTATTcctaatttaaaacatcaagtaAAATCTATAGAGAGTATACCACAAAAACATATtcatttatataacaaaaaagacATCAGCGAACAACATTTGCATATTCCCAACACTATATGTAATCccgttaatttatttgttgatgGCAAAGTAGTTCGATATGTACCTGGAATGCCTGGACCATTAGCTGCTGAAATGCCATTGAATGTTGCTTACGGAAACAGGTCGGTCATTCGTCCAACAGCGAACGTTGGAATCGTTAGTACAGTTACATCCCCCCTACCGGCAGAACTTAACTCTCTACACTATTCTAAAGTAACAACGGACAATCCAACACAATCTGATGGTGGTCAcaccgaaatagaaaaaagaaacactCGTATTGTGGAAGCTAAAAACGAAACTCTTTTAAAGTTACCGGAAAAACAAATTGTCAAATCGCCTCTTTCAAGAAACGACTTAAAATCGCCGGTTATTTCTATGAACGAACCCCCAAAAAGATTTGCTAGGCCAAATACGTTAGCGCTTAAACCTAGTATATCTACCCAAAAACAACATCATGGATTAACACCGACGATGTTCAATCAAATTTTGATTAGTCCGGATACACCGCGAATTGCAAAAAAGTATATGCAACACTTTTTACATGGAAATTACTTTAGTTATCTGGGTTTAAAAAGTTCGACCAAATCTGTTTATTGTACGTTAAACAAAACTCAACCATTTTATGTtccacattttaaaaaattaagcatgTACTCTGAGTGGAGACAGCAAGATATTAAGGGAGATAAATTGTATGTCAGTGCTTATGATTCCAATCAGAGGCAACACAAATACGTTACAGCTGGAAAAGCGAATGCTGATTTAGTGGTTCATTCTAGTTATAAGTTTTCGAGCGATGGTGTATCAAAAAAGGACGACCAATTTAAAAGCAGTTCCATCTTAGGGGGATATGAATCAAACGAAGATTATACTTATGTTCGAGGAAGAGGTAGAGGACGTTATGTGTGCGATCAATGCGGAATTCGTTGCAAAAAACCATCAATGTTGAAGAAACACATTAAAACGCACACGAACGATCGACCCTTTACGTGCAATCATTGCAATTTTAGCTTTAAAACGAAAGGTAACCTTACTAAACATATGAAGAGTAAAGCACATACAAAGAATTATGCGGCAAGCAGCAGTTCTAATTCATCGGCTCCTCAAAGTGGTACCCAAAGCTCTGATTCCGATACTGACGACAGCGGAATGGACAGTAGCGATGAATCGACAAGGCAGCACGAGGCAGCGTACGGACTATTATCGTTATCACAAAAAACTACACAATCTCTGTCTTCAACTGTCCAATCGGAAAATTTACACATGAGTTCAAATTCGTTATGCTCCTTAAATATTAGTGCGATCGAAAGTACAAGTAATTTTATGAACACAGAACAAGTCACCCAAGTCAACAATTCGAATtttgccaaaaataaaattctggATCAACAAGTATCCTACGATGCATCTAAAATAATACCAGAAGTGATATCTACGGATTCTACttcaaaagaaattcaaaaCCTTAACACATTCTTAGGTAAATGGAATATAAACAGACCACTAACGTATCCATATACCTCCGAAATAACTGacgaaaaagttaataaaaacgttGCAATTGTTACtcctttttatgtaaataatttagatgCACCAACGACGACCGCGTCTGAGACAAGACAAGAGTCGCAACATATCTCAGCTTTTAGTATCGTTCAGAAACATAATGTTCATTATTCTCCTCCGGGCGATTTAACGAAAACGAGCGAAAGTAGAAGTATTACGATTCCTATTACAATTAGTTACGATCCTAGCTATTTGGAGCAGTATAAAATAACACAAGAAGTTCCTGTAATTTCTAAACATCAAAGTAATATTTCGAGAATTGTTCCTTCTGTTAAGGTTAATGATAGAATAGTTATCAATAGTTCTTTATGTGATGGTGCTGTCAGCGAAAGGAAGCGCAAAATTTCGGAAGCGGACAATAAAATTGAAGTGAAGTTACTAAAAGCGACTTCCGAATCTGAAGCGATGGATTTATCGATGCCATCGATTATAGACAAAAGCACAAGTAGTTTAAGTTATAATGGAGTTAAAGAAAGTGATTTAAGAGTGAATCATTTAACGGCGATCGAATCGAATAGAGCGCATGTGGagcctataattaaaaaaattgtaagaaatttAGAATATACAGGGGGAGAAAGTTCAAATTTTAACCATGTTAGTGATAGAACTAAATTGCCATATAAAATAAGCGATGATAGCAGTAAACAGGTTGAATTAGAATTGCGCGAAGATAATGATAATGccatgaatttaaaaatattgcctCAAACCCAGTTAGATGaccaaataaatattaattatgtgATACAAGAAAATAATACAGCTGTGGTAACAGCTTTTACGGAAGTTCCATCTATGGATTACGATAACAGTGCAATGGAAACGTTAGCCGATGTTGCaacaaaacaagtaaaattagaaaaaaacattttggctAAAAACGTAGCGTccgaatatttaaaattgactACCAAGAACGAATTTCAAAGTATAGAAGGTGTCACAGATTCTAATAACTTTAATACTGGTAGTAAGGAAGTTAACGATTTAATTGTGAAACCGGAAGAgaataaaaattgtacaatttgTTCGAAAAGTTTTAGTAAACCTTCACAGTTGAGGTTGCATATGAATATACATTATTTAGAACGACCATTTCGGTGTGATCCTTGTTCAGTTAGTTTTAGAACTAAAGGACATTTTCAGAAACATGAAAGAAGTGCTGGACATCATAATAAGTTATCGTCATCTCCAATGTTTTCTTCATCAGAACCTCGGCCTTTTAAGTGCTCTGACTGTAATGTAGCTTTCAGGATACATGGCCATTTAGCTAAACACTTACGATCAAAACTACACATTATGAAATTAGAATGCTTAGCTAAGATTCCTTTTGGTTTATATGCTGAACTTGAAAGAGCTAATAGTCTTCTCACGGAAATTAATACCACTGATGGGGACCAATGCTTGGAAAGTTTAAAGGCTTTAGCTAGAAAAGTGTTTATGAACGACCCGAGCAAATTAAACCAATTAGAAGTGTCGCCATTAAGTAGTACAGAATCATCAAATAGTTAA
- Protein Sequence
- METSADRYLHKKFKKQLNVEPNVNQEGTRNVIKRVQIGDSSQNYRNSELVTNNVVISGIFSKTCDDILVTTNKKDVPKHSTNDNIINVYNTIASSNVAKSSISHLNVAERQENNMIDRIKPVEESVNPQSSNTCISYVISKNSRVENRNKPEAHFRTANFDTRYNVSEPIGIPTVGTSSILVDNVYMDQYVTSKIVHVDKLEDISSNCSVANNDIIHLQEGSCNILDGRGEQNYSSDFASVEKGSGGKYICSYCNLACSKPSVLQKHIRAHTNERPYPCVSCGFSFKTRSNLYKHCRSRTHANRVMGNKAQEINSEAETDSQTKLELDQNNSVELIHEENISKIQEVNENANFNNERLGLDMQKKPYKPRFHNSKAFFDNILTDNQKNIEDQKVPETVQNKPSNSELLSLHINDVINKNNAIVNSNESYLIRKRSVDNSYLENVNTNGFVHHRANEVMNSLEERNDEPLNLTNKTRKRCMSEVMEPTMHKSLIKELLLKNLYADSMQCPHCKMIFQTVTELELHKMRSCKGYTKSGAKYNRSSSVNVASILTKNKNAFDSISYLQSSTFPLKSPGPFLGNTRLVESDKGKSFSFDDSFAKFQNSLQNPNVLKSTLSYSLSPLHFENDRNKKTPVKLFGGEVKISQTTGTKSFKIDSKDSGDRYVSEQFLDSGERLSENRVVKSSLQSGGTVLQNKSDYNNKQDVLRSPSDVIRMYDNRELSSSIDLVNLDKNKFNYTNQNHHYTESKSNLESLRCSENIIHSDTINSMTTSYKYTNIMDFSQKAVNLLAPNLKQPNLTIPGVPMPVSSKLTLSHSPILHMDVSKPETTKLPSGLLQSEIESIPNLKHQVKSIESIPQKHIHLYNKKDISEQHLHIPNTICNPVNLFVDGKVVRYVPGMPGPLAAEMPLNVAYGNRSVIRPTANVGIVSTVTSPLPAELNSLHYSKVTTDNPTQSDGGHTEIEKRNTRIVEAKNETLLKLPEKQIVKSPLSRNDLKSPVISMNEPPKRFARPNTLALKPSISTQKQHHGLTPTMFNQILISPDTPRIAKKYMQHFLHGNYFSYLGLKSSTKSVYCTLNKTQPFYVPHFKKLSMYSEWRQQDIKGDKLYVSAYDSNQRQHKYVTAGKANADLVVHSSYKFSSDGVSKKDDQFKSSSILGGYESNEDYTYVRGRGRGRYVCDQCGIRCKKPSMLKKHIKTHTNDRPFTCNHCNFSFKTKGNLTKHMKSKAHTKNYAASSSSNSSAPQSGTQSSDSDTDDSGMDSSDESTRQHEAAYGLLSLSQKTTQSLSSTVQSENLHMSSNSLCSLNISAIESTSNFMNTEQVTQVNNSNFAKNKILDQQVSYDASKIIPEVISTDSTSKEIQNLNTFLGKWNINRPLTYPYTSEITDEKVNKNVAIVTPFYVNNLDAPTTTASETRQESQHISAFSIVQKHNVHYSPPGDLTKTSESRSITIPITISYDPSYLEQYKITQEVPVISKHQSNISRIVPSVKVNDRIVINSSLCDGAVSERKRKISEADNKIEVKLLKATSESEAMDLSMPSIIDKSTSSLSYNGVKESDLRVNHLTAIESNRAHVEPIIKKIVRNLEYTGGESSNFNHVSDRTKLPYKISDDSSKQVELELREDNDNAMNLKILPQTQLDDQININYVIQENNTAVVTAFTEVPSMDYDNSAMETLADVATKQVKLEKNILAKNVASEYLKLTTKNEFQSIEGVTDSNNFNTGSKEVNDLIVKPEENKNCTICSKSFSKPSQLRLHMNIHYLERPFRCDPCSVSFRTKGHFQKHERSAGHHNKLSSSPMFSSSEPRPFKCSDCNVAFRIHGHLAKHLRSKLHIMKLECLAKIPFGLYAELERANSLLTEINTTDGDQCLESLKALARKVFMNDPSKLNQLEVSPLSSTESSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151882;
- 90% Identity
- iTF_00151882;
- 80% Identity
- -