Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069434.1:43174642-43187568[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00013 0.03 17.4 1.1 1 23 185 207 185 207 0.96

2 9 5.9 1.4e+03 2.7 1.5 1 21 363 383 363 385 0.88

3 9 5.2e-06 0.0013 21.7 1.3 3 23 393 413 391 413 0.98

4 9 0.00041 0.097 15.8 0.8 1 23 417 440 417 440 0.96

5 9 0.011 2.5 11.3 4.0 1 23 452 474 452 474 0.96

6 9 2.5e-06 0.00059 22.8 1.8 2 23 481 502 480 502 0.96

7 9 2.3e-05 0.0055 19.7 0.3 1 23 509 531 509 531 0.98

8 9 2.9e-06 0.00068 22.6 0.4 3 23 537 557 536 557 0.99

9 9 5.4e-06 0.0013 21.7 1.0 1 23 563 585 563 585 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00013	0.03	17.4	1.1	1	23	185	207	185	207	0.96
2	9	5.9	1.4e+03	2.7	1.5	1	21	363	383	363	385	0.88
3	9	5.2e-06	0.0013	21.7	1.3	3	23	393	413	391	413	0.98
4	9	0.00041	0.097	15.8	0.8	1	23	417	440	417	440	0.96
5	9	0.011	2.5	11.3	4.0	1	23	452	474	452	474	0.96
6	9	2.5e-06	0.00059	22.8	1.8	2	23	481	502	480	502	0.96
7	9	2.3e-05	0.0055	19.7	0.3	1	23	509	531	509	531	0.98
8	9	2.9e-06	0.00068	22.6	0.4	3	23	537	557	536	557	0.99
9	9	5.4e-06	0.0013	21.7	1.0	1	23	563	585	563	585	0.99

Sequence Information

Coding Sequence: ATGGAAAATATTGAGCACcactttaacaaaatttgtcgTGTGTGTAAAAGTATATCTTCGGTTATGCAATACATATTTGTAAACAATGGTAGCACTGATGATTGTCCTCGAATCGATGAGATGCTAATGGCATGTAGTGCTGTTGTGGTAAATTATGGAGATGGTTTACCAAACTTAATATGCTCAAGTTGCAATGAAAAACTTACAAATGCCTATCAATTTAAGCAATTGTGTGAAAGGACAGATTCCACTCTTCGTCAGTACCTAAAAGATGCAGAAAATTGCACATACAAAGAATTCACATCAAATGAGAACGACAGTGTAATTATTAACGAAGGTACAAAGGAAAATGAAGATGTGTCCTATGTCAATGAAGAAAAAGACTACAAAGAGATTGAAGTAGAAATAAAGTTAGACCTTGATGATAATGATCAAGAATTTTCCTGTGGTAGTAAAACCGATTTTATAGAATTTGTAGATAACAACgaactgtttttaatttccCATGCTTGCCCCAAATGTGCTATGGAACAGTGTAAATGTGATCAGATACATATTTGTGATATTTGCAACAAAGGTTTTAATGAACAGGATAGTTTGACTATTCATAAGAAACTACACATTAATGAGATGccagatttagaaaatttacatgATATGGGCGAGGATATTGACATTGAGTACTGTGTACTAAATGGAAATGATATGATACCTATGTTTTCTAATATAGAGACCGAGCCAAATAATTTACATGTCTCTGAAAAGGaagtatttgattttgaaagTAGTGGATTAGAAAAACCCATTAATATTGAAGATATTGCAAGTATAGaggAAGATATGCTGGAGAATCTGAAGAAACAGCAAGCTGACGTAACAGAAGATTACAACAATGGATATTCGGGATATTTCCTAAGAAAACCGGTAAtgaaaaagaaagcaaaatcTGAAGGTCAACGCAAAAACGTTTTGCCTAAATTACCTATTCTACGAAGTCGCAAATCACCATCACACAAAACTCGCAGTAAACATGCGACAAAACCAGATAGCGGGTTTGCTTGTCCTATTCCCAGTAAAAATCGTACACATCGATGTATCATTTGTAATATGAAAATTGGGAATGGAGGCAATCTTACTAGACATATGTTGTGTCATTTAGAGGAAAAGTTATTTGGTTGCGAAGTttgtaataaaagatttaacaGGACAGATAGTCTAAGGAACCATATGAAGATACATTCTCAAGACTACGAATGTAAAATATGTAAAGAACCATTTGGTAATTATAACACCCTAACAAATCATTTGACTTCTAAACACAAGATTAAAGACAAAATTAGTTCCAATATAAAGTATCGATGTTCTGAatgctttaaaagttttagttcTGAAAAATCCAGAAATACGCATAAGACGAACCACGCGTATAACAAGAATTTACAGTGCcacatttgtaaaaaatcatTTGTTTCTAAAGCAAATCTTACAGACCACGTTAAGCTTCACAGTGAACACTCTATGACATTTGTATGTTCTGAATGTGGACAGAAATTTATTCGTACTCAAGATTTGGTTATACATATGCAACAGCATCGTACAATAAATTTGTGTACAATTTGTGATAGAGAGTTTGGACGGATTTCTAATCTAAGGGCGCATATGAAAACTCACACTGGAGAGAAACCGTATCGATGCACCTACTGTCGAGCAGCTTTTACACGAGAAACTGATTTGAAAGCTCACATAAAGCGGCATACTAAGAAACGATCTACCTCTAAATAA
Protein Sequence: MENIEHHFNKICRVCKSISSVMQYIFVNNGSTDDCPRIDEMLMACSAVVVNYGDGLPNLICSSCNEKLTNAYQFKQLCERTDSTLRQYLKDAENCTYKEFTSNENDSVIINEGTKENEDVSYVNEEKDYKEIEVEIKLDLDDNDQEFSCGSKTDFIEFVDNNELFLISHACPKCAMEQCKCDQIHICDICNKGFNEQDSLTIHKKLHINEMPDLENLHDMGEDIDIEYCVLNGNDMIPMFSNIETEPNNLHVSEKEVFDFESSGLEKPINIEDIASIEEDMLENLKKQQADVTEDYNNGYSGYFLRKPVMKKKAKSEGQRKNVLPKLPILRSRKSPSHKTRSKHATKPDSGFACPIPSKNRTHRCIICNMKIGNGGNLTRHMLCHLEEKLFGCEVCNKRFNRTDSLRNHMKIHSQDYECKICKEPFGNYNTLTNHLTSKHKIKDKISSNIKYRCSECFKSFSSEKSRNTHKTNHAYNKNLQCHICKKSFVSKANLTDHVKLHSEHSMTFVCSECGQKFIRTQDLVIHMQQHRTINLCTICDREFGRISNLRAHMKTHTGEKPYRCTYCRAAFTRETDLKAHIKRHTKKRSTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -