Alei040957.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aquatica leii
Gene Symbol
Zfpm1
Assembly
GCA_035610365.1
Location
CM069433.1:106229298-106250465[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 7.1 1.7e+03 2.4 0.0 2 23 7 28 6 28 0.91
2 14 0.032 7.7 9.8 1.2 1 23 465 488 465 488 0.89
3 14 0.0003 0.072 16.2 0.7 1 23 605 627 605 627 0.99
4 14 0.00041 0.097 15.8 1.7 2 23 630 651 629 651 0.97
5 14 0.68 1.6e+02 5.7 4.1 3 23 659 679 657 679 0.95
6 14 3.6e-05 0.0086 19.1 5.3 2 23 686 707 685 708 0.95
7 14 5.5 1.3e+03 2.8 0.4 5 23 721 739 719 739 0.95
8 14 0.00032 0.077 16.1 4.4 2 23 745 767 744 767 0.96
9 14 0.038 9.1 9.6 0.0 2 23 783 803 782 803 0.96
10 14 0.00044 0.1 15.7 1.7 1 20 809 828 809 831 0.92
11 14 0.0009 0.22 14.7 0.2 1 23 839 861 839 861 0.99
12 14 0.0014 0.34 14.1 3.7 1 23 867 889 867 889 0.98
13 14 1.3e-06 0.0003 23.7 3.7 1 23 895 917 895 917 0.98
14 14 0.005 1.2 12.4 6.9 1 23 923 945 923 946 0.95

Sequence Information

Coding Sequence
atggaaTCTGGAAACGTCGTATGTCCTGTGTGTACTTTGTATCTACGCCCCGGTATTACCTTGAAAGCGCATCTTACAAGTCATCCTAAGCAGAAAGTCATTGAAGCTTTAGTTAACTTAACCAGTTATAGAAATGACGTCAAAGAAGTGGCTGTTTCTACTACTGCTTCAGAAGCAACACCCACGACAGAAAATTGGAATCAACCGGTTTCAGGGTTCTCTCAACTTCCGGGAAATCACTCTTTTATATACCAACAATTTATGAGTACAACAAGTCAACCGCCTAATGTAGTTAATGTTAACCCTATAACTCAACAGTATATTACAATACCCACTGTATTTAATCCACAATTAATGTGTCAACCATATATGTACCATCAACAACAACAAGTGATTATGTCAGCGGGTACTTCAGTACCAGCTCCCATAATTCGAAAACCGACTATAATTGATTTAAGCAATGATACGGAGAATGTTTCAGACTCGGAAAGATTAGGTAGTGAAAATCAACATAATGTAGAATTGGATGAATCCGATGTAGTTaaggataaaaacaaaattgataatagTAATGATAGTAACTCAAACGATGATTTAGATTCTTCAAAAGTTGAttcagaaattttagaaaatatggaTGACACAAAAGAGGAAATTGAAACTGAAGAGCATGATTTTGAAAACGACTGTAATGTAGCATCGCCTGCTTCTAGCGAAGGTTCTGATTATATACGTGTTCGTACTGATCTTAATAAAGCGTGTCAAACTCAGCATGTTGTTCATATTAATAATGAAGTACAAAAACCAgaagtacaaaatttaaataccgTGCCTTTGCATAATACGTTTGAAGGAAATTATTCATCTAACCATTTAAATACTTTACAAGCGAATGATCAAGTTATTGATATGAATGGTATGCAACTGGTGTTGTGCAATGATTTTATGGGTAGTCAATTAATTTCTCAGGTTGACGACTTTGAGTGTATAAATAATCGTAGTGAACGGACTATATTAATGAATATTGGTGGTATGGACGGTGGATCTGCTAATGCTTATAACGGTGTGGATCAATTAGGGGAAGAAAGCATCTCTAGGGAAAGTACTAACATCAGCATACGAGCAGATGAACCTATGCCTCCAAGAGGAGAATTATCCGGACAGgAAAGTAATGGAGCTGCAAGTGACATAGTTTGGAATAGAGTTCATTGTGAAGGCAGTTCTGTCACTTCAACCTCGTACGACCTCTTTGCTCGTGAAATATGGGGCGATTCCGATGGTTCCGAAGAGGACGTTCCACCGCTTCAAAGTCGAAATCCACCTGCCGTTCAATTCAATCCCGATGTAGACGATACTCCCACGATTGTGAGTGTGACTGAAGCTcctttaaatttcaaatgtcCCATATGTGGTCAAGGTTTTAAATGTCCGAAAGAACGAAGAGTGCACCAAACTGAGGTTCATAGTAAAAAAGATGATACTAAAACAAACGATAAATCTACCACCGTTACAAAAACTGGGAAGAAACCTGCGAAAAAATCAGTTATCAAACCGAAGAAAACGAACGAGATTAAAAGCGAAAATAATTTCGATGGTGTTTTTACGATTAAACTGAATTTAGATACAGTTCCCGCTCAGGTTGAAGAGCAAAGTGAAATTGGTAGAGCTGCGGTAATAGCACTGGTTACGAGCGAGTGTGATCTTGACGATAAAGGCGAAGTAAAATTCTCCACTCAAAATATTTGCAACAATACGTTTCCAGATACTAAAtctcagaaaaaaacaaaaccgcaAAATAGAAGTTATACTTCTTATAAGTGCAGTACATGTGAAGAGGCTTTTGAAACTGAATATCAATATAATCTACACTTAAAAGTCCACCCTCTAGAATGTCAGTTATGtgctaaatatttttacaggaGAAGCAACATGCAGTTGCACATGAAACGCCACTTAGGAATTAAACCTCATTTGTGCGAATTTTGTCAAAAGTCATTTCTTACCAAGCAAAAATTAGATGAACACAAAAACACACACACGGGAGAATCGCCAATAAAATGCACGATGTGCGACGAAAGTTTCCGTAGGCATTCGAATTTGGTTCAACATCGTAATCGTCATCatttaaagcttaaaaaaaaagtgaaggATTATGTTTGTTACTGCGGTGAAATTGTGCATTCTAAGAAGAAATTAGCTTGGCATAAGGAAATTCACGACGCCAAGCCTAAATCTTGTGCCCACTGTAGTGAAAAATTTGTGCATATGTCTAGTTTAACGCGACACATGCGTCGGGCTCACAACGAACGTTTTGTACCAGCCGAAGATAGAAACAACGAAAACGTCGAGTGCCCGATCTGTAAGGGAGTGTATTTGAAATCTTCGTTAGAAGTACATATACGTAACCACAGCGGGCATAGGCCGTTCACTTGTTCAGTTTGTAGTAAAGATTTCACTACCAAGTGGAATTTGAAACTGCATAAATGGACGCACGCGTCTAGAGCCTTAAAACCGTACAAATGTGATCAATGCAAAGGGGCGTTTATTAGGGAGACAGATTATGTAGCACATATGAATTCACATAAAAGTGTTAGACCGTATACTTGCAATTATTGCGGGGCTCAATTTATACGCAAATACAACTGCCAAAGGCACGTTAAGGAACACGAAAAAGctaaaactttttcttgtcaAGTTTGTGGTAAAACTTTCCATAGGTCGTATTATCTTAAAGATCATATGCGGGTTCATAGTGGTTTAAGACCTTTTTCTTGCCACGTCTGTGGCAAAACATCAACAACTAAATCTAATCATAATAAACACGTTATGATACATCATGCTAAAGAACCTGTTAGTACTGAAAACTGA
Protein Sequence
MESGNVVCPVCTLYLRPGITLKAHLTSHPKQKVIEALVNLTSYRNDVKEVAVSTTASEATPTTENWNQPVSGFSQLPGNHSFIYQQFMSTTSQPPNVVNVNPITQQYITIPTVFNPQLMCQPYMYHQQQQVIMSAGTSVPAPIIRKPTIIDLSNDTENVSDSERLGSENQHNVELDESDVVKDKNKIDNSNDSNSNDDLDSSKVDSEILENMDDTKEEIETEEHDFENDCNVASPASSEGSDYIRVRTDLNKACQTQHVVHINNEVQKPEVQNLNTVPLHNTFEGNYSSNHLNTLQANDQVIDMNGMQLVLCNDFMGSQLISQVDDFECINNRSERTILMNIGGMDGGSANAYNGVDQLGEESISRESTNISIRADEPMPPRGELSGQESNGAASDIVWNRVHCEGSSVTSTSYDLFAREIWGDSDGSEEDVPPLQSRNPPAVQFNPDVDDTPTIVSVTEAPLNFKCPICGQGFKCPKERRVHQTEVHSKKDDTKTNDKSTTVTKTGKKPAKKSVIKPKKTNEIKSENNFDGVFTIKLNLDTVPAQVEEQSEIGRAAVIALVTSECDLDDKGEVKFSTQNICNNTFPDTKSQKKTKPQNRSYTSYKCSTCEEAFETEYQYNLHLKVHPLECQLCAKYFYRRSNMQLHMKRHLGIKPHLCEFCQKSFLTKQKLDEHKNTHTGESPIKCTMCDESFRRHSNLVQHRNRHHLKLKKKVKDYVCYCGEIVHSKKKLAWHKEIHDAKPKSCAHCSEKFVHMSSLTRHMRRAHNERFVPAEDRNNENVECPICKGVYLKSSLEVHIRNHSGHRPFTCSVCSKDFTTKWNLKLHKWTHASRALKPYKCDQCKGAFIRETDYVAHMNSHKSVRPYTCNYCGAQFIRKYNCQRHVKEHEKAKTFSCQVCGKTFHRSYYLKDHMRVHSGLRPFSCHVCGKTSTTKSNHNKHVMIHHAKEPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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