Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069432.1:271113247-271115220[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00041 0.098 15.8 4.2 2 23 137 158 136 158 0.97

2 15 0.0013 0.32 14.2 0.9 1 23 164 186 164 186 0.98

3 15 6.2e-05 0.015 18.4 5.5 1 23 192 214 192 214 0.98

4 15 4.2e-06 0.001 22.0 0.7 1 23 220 242 220 242 0.98

5 15 0.2 47 7.3 3.6 1 23 248 270 248 270 0.98

6 15 0.00033 0.079 16.1 3.2 1 23 276 298 276 298 0.98

7 15 0.00053 0.13 15.4 0.2 1 23 304 326 304 326 0.98

8 15 0.004 0.96 12.7 2.0 3 23 336 356 334 356 0.96

9 15 0.0031 0.74 13.0 0.9 1 23 390 412 390 412 0.98

10 15 0.21 50 7.3 5.3 1 23 446 468 446 468 0.98

11 15 0.029 6.8 10.0 1.3 2 23 475 496 474 496 0.97

12 15 0.00091 0.22 14.7 1.2 1 23 502 524 502 524 0.98

13 15 0.0023 0.56 13.4 2.6 1 23 530 552 530 552 0.98

14 15 0.026 6.2 10.1 1.6 2 23 559 580 558 580 0.97

15 15 0.00028 0.067 16.3 2.3 1 23 614 636 614 636 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00041	0.098	15.8	4.2	2	23	137	158	136	158	0.97
2	15	0.0013	0.32	14.2	0.9	1	23	164	186	164	186	0.98
3	15	6.2e-05	0.015	18.4	5.5	1	23	192	214	192	214	0.98
4	15	4.2e-06	0.001	22.0	0.7	1	23	220	242	220	242	0.98
5	15	0.2	47	7.3	3.6	1	23	248	270	248	270	0.98
6	15	0.00033	0.079	16.1	3.2	1	23	276	298	276	298	0.98
7	15	0.00053	0.13	15.4	0.2	1	23	304	326	304	326	0.98
8	15	0.004	0.96	12.7	2.0	3	23	336	356	334	356	0.96
9	15	0.0031	0.74	13.0	0.9	1	23	390	412	390	412	0.98
10	15	0.21	50	7.3	5.3	1	23	446	468	446	468	0.98
11	15	0.029	6.8	10.0	1.3	2	23	475	496	474	496	0.97
12	15	0.00091	0.22	14.7	1.2	1	23	502	524	502	524	0.98
13	15	0.0023	0.56	13.4	2.6	1	23	530	552	530	552	0.98
14	15	0.026	6.2	10.1	1.6	2	23	559	580	558	580	0.97
15	15	0.00028	0.067	16.3	2.3	1	23	614	636	614	636	0.98

Sequence Information

Coding Sequence: ATGGATGCAAAGACATCATTCGCCTGTCGTATTTGTTTACAAGAAATTATAGAAACGGAGCAATGTTACTTTCTAAACAACAACTATGAGTTAGAGCTACAATCGAAATTGTTAGAATTGTtgccaaaaattGACTTAAACATCACACCTAACCCAAATATTTGTGACCGATGCAAGATAACGATTGAAGAAATACATGAATTCAAGCAACTGTGCTTGCAAACTGAAACCACTGTAAGGGACTTACGAGGACTAATACCAGTTGATGTTtcaacttttgttaaaaaagaaatcaccAAAGAAGAATTGATTGATGATAATGTTAAAATCGAACTTTTAGATTTACAAATCGTCAACGATGACTGCTTGGAAATCAACACAGATATGCCTGTATGCATagagaaatgtaaatgcgaTCAATGTGGTTTTAAAAGTGTTGATAAAAGTACTTTCAACAAGCATATGATGACTCACGGCTTGTTGAAACCgtttgtttgtgaaacttgtgggttCTCGACTCAAGAGAAGCTTAATCTAAAGAAACACATGCTGAATCATAGCTcggtaaaaccgtttgtttgtgaaacttgtggTTATTGTACGCAACGTAAATATCATTTAAAGAGACACATGCTAATTCATACCTCGataaaaccgtttgtttgcgaAACTTGTGGTTTTTCTACGAGACGCAATTCGGGTTTAAAGAAACACATGCTGATTCATAGCTCGGTAAAATTGTTCGTATGCAAAACTTGTGGGTTTTCTAGTTACTGTAGATCAAATTTTAGGGGACATATCCTGACTCATAGCAAGGTAAAATCGTTTGTTTGCGCAACTTGTGGTTTCTCTACGCAACATAAAACGAGTTTAAAGAAACACATGCTGACTCATAGCTCTGTAAAATCGTTCGTATGCAAAGGTTGTGGGTTTTCTGCCCAAGATAAACCCAGTTTAAAGTCGCACATACTGACTCATTGCATGCCAAAACCGTTTCTTCATCtttgtgaaacttgtgggttCTCCACTCGCAATAAGTCAATTTTAAAGATACATATGCTGACTCATAGCAcggtaaaaccgtttgtttgcaAGACTAGTGGTTTTTCTACTCAACATGAATCGCGTTTAAAGTTTCACATGCGGACTCATAGCTCGATAGAACCGTTTGTTTGCGAAATTTGTGGTTTTTCAGTGCTACATAGGTCAACTTTCAAGATACACATGGCGACTCATCGCTTGGCAAAACCGTTCGTTTGTGATAGTTATGATTTTTCTACGCAACATAAACCTAGTCTAAAGTCAGACTCGCTGACTTATTCCTTggtaaaaccgtttgtttgcgaAACTTGTGGGTTCTCTACCCACTGTAAGTTTAGTTTAGAGAAACATATGTTGACCCATAAGACTGTAAAACCCGTTGTTTGCGAGATCTGTGGTTTTTCTACGCAACATGAATCGCGTTTAAATTTTCACATGCGGACTCATGGCTCGATGAAACCGTTTGTTTGCGGAACTTGTGGTTTTTCTGCACGACACAGGTCAACTTTAAAGATACACACGGCGACTCATCGCTTGGCAAAATCGTTCGTTTGCGAAACTTGTGGGTGGTCTACTCACTGTAAGTCAAATTTAGAGGAACATATGCTGACCCATAACACTGTAAAACCGGTTGTTTGCGAGATCTGTGGTTTTTCTACGCAACATGAATCACGTTTAAAGTTTCACATGCGGACTCATAGGTCGATAAAATCGTTTGTTTGTGATAGTTATGATTTTTCTACGCAGCATAAACCTAGTTTAAAGTCAGACACGCAAGCTTATTGCTTGGCAAAACCGTTTATTTGCGAAACTTGTGGGTTTACTACTCGATATAAGAAGTATTTAACTACACACTTGATGACTCATAGCTCAGTAAAactctaa
Protein Sequence: MDAKTSFACRICLQEIIETEQCYFLNNNYELELQSKLLELLPKIDLNITPNPNICDRCKITIEEIHEFKQLCLQTETTVRDLRGLIPVDVSTFVKKEITKEELIDDNVKIELLDLQIVNDDCLEINTDMPVCIEKCKCDQCGFKSVDKSTFNKHMMTHGLLKPFVCETCGFSTQEKLNLKKHMLNHSSVKPFVCETCGYCTQRKYHLKRHMLIHTSIKPFVCETCGFSTRRNSGLKKHMLIHSSVKLFVCKTCGFSSYCRSNFRGHILTHSKVKSFVCATCGFSTQHKTSLKKHMLTHSSVKSFVCKGCGFSAQDKPSLKSHILTHCMPKPFLHLCETCGFSTRNKSILKIHMLTHSTVKPFVCKTSGFSTQHESRLKFHMRTHSSIEPFVCEICGFSVLHRSTFKIHMATHRLAKPFVCDSYDFSTQHKPSLKSDSLTYSLVKPFVCETCGFSTHCKFSLEKHMLTHKTVKPVVCEICGFSTQHESRLNFHMRTHGSMKPFVCGTCGFSARHRSTLKIHTATHRLAKSFVCETCGWSTHCKSNLEEHMLTHNTVKPVVCEICGFSTQHESRLKFHMRTHRSIKSFVCDSYDFSTQHKPSLKSDTQAYCLAKPFICETCGFTTRYKKYLTTHLMTHSSVKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -