Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069435.1:50532089-50538630[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00084 0.2 14.8 4.1 1 23 214 236 214 236 0.97

2 11 2.6e-05 0.0062 19.5 1.5 1 23 242 264 242 264 0.98

3 11 8.7e-05 0.021 17.9 0.7 1 23 270 293 270 293 0.95

4 11 0.013 3 11.1 3.5 1 21 299 319 299 321 0.95

5 11 0.00026 0.062 16.4 1.9 1 23 327 349 327 349 0.99

6 11 1.5e-05 0.0035 20.3 0.8 1 23 355 377 355 377 0.98

7 11 0.00066 0.16 15.1 1.4 1 23 385 408 385 408 0.97

8 11 7.2e-05 0.017 18.1 2.5 2 23 415 436 414 436 0.97

9 11 0.00026 0.062 16.4 0.3 1 23 442 464 442 464 0.99

10 11 2.2e-05 0.0052 19.8 5.0 1 23 470 493 470 493 0.96

11 11 4.1e-08 9.8e-06 28.4 0.8 1 23 507 529 507 529 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00084	0.2	14.8	4.1	1	23	214	236	214	236	0.97
2	11	2.6e-05	0.0062	19.5	1.5	1	23	242	264	242	264	0.98
3	11	8.7e-05	0.021	17.9	0.7	1	23	270	293	270	293	0.95
4	11	0.013	3	11.1	3.5	1	21	299	319	299	321	0.95
5	11	0.00026	0.062	16.4	1.9	1	23	327	349	327	349	0.99
6	11	1.5e-05	0.0035	20.3	0.8	1	23	355	377	355	377	0.98
7	11	0.00066	0.16	15.1	1.4	1	23	385	408	385	408	0.97
8	11	7.2e-05	0.017	18.1	2.5	2	23	415	436	414	436	0.97
9	11	0.00026	0.062	16.4	0.3	1	23	442	464	442	464	0.99
10	11	2.2e-05	0.0052	19.8	5.0	1	23	470	493	470	493	0.96
11	11	4.1e-08	9.8e-06	28.4	0.8	1	23	507	529	507	529	0.97

Sequence Information

Coding Sequence: ATGACATCTACACAATTTTCCCAAGATCCTATAAAATTAGAGGGTGTAGATTCATCCGAAAACGTGACAGAAATACAGTCGTACTTAGAGGGATTTCAGAAAGAAATTGAAGGAAGCGATGGGACCATACAGCACGTCACTGCGCTGCAAACTGACGGCGACGAAGCTGATGTCGAGGCTGAAGGTGGTACCTACTTTGTTGATCAAGCTGGACATTACTACTATCAGGCAAAAGGCCAAGGCCAACCAGTCATGACGGTAATGTCAGCAGCTATCAATGATGTGTCGGAAGAAGGTGAAGAATTTATTATCAACCAGGAAAACGACGAAGAAGGTGATGAAGGGGAGGACCCGATACCAGAAGATGCTCCTAaccacattttaataaattctggtAATGCCTACCAGAAAGTTACAGTGGTTCCTGCAGATACCAATACAGGCGAACTTAGTTATGTTTTAATTGTACAAAACCCTGAAGATATTAAAGAGGGCGATCAAACTGATGGCGACCAAGATATGACAGTTTACGATTTTGATGAAAACGAAGATGGAGCACCAATTGATTCAGAAGCGGAAGACGATAAATCGAAAATAGTGAaaatttttcatagaaaatCGCAAGTTGTAACACAAGCACACATGTGCAACTACTGTAACTACACAAGTccaaaacgttatttattatctagGCATATGAAGTCACATTCAGAAGAACGGCCACATAAATGTAGTGTGTGCGAACGTGGTTTCAAAACGTTAGCGTCGTTACAAAATCATGTCAACACTCATACGGGTACCAAACCGCACGCCTGTAAATATTGTGAAGCAGCTTTTACAACTTCTGGCGAACTTGTACGGCACGTACGATATAGACACACACACGAAAAACCCCATAAATGTAATGAATGTGATTATGCTAGtgtcgaattgtctaagttaaAAAGACATATACGGTGTCATACTGGTGAACGTCCATACCAGTGCCCGCATTGTACCTATGCCAGTCCAGATACCTTCAAATTGAAACGTCACTTAAGAAttcacactggtgaaaaaccttACGAATGTGATATTTGTAAAGCACGATTCACACAGTCAAATAGTTTAAAAGCTCATAAATTAACTCACAATATTGGAGAGAAACCTATATTTCAATGCGAACTATGCCCAACAACGTGTGGTCGTAAAACCGATTTGAGAATCCATGTGCAAAAGTTACATACTTCGGATAAAcctttaaaatgtaaaagatgCGGCAAATCTTTTCCAGATCGCTATAGTTATAAGcTCCACAATAAAACTCACGAAGGAGAAAAGTGCTACAAATGTGATTTATGTCCGTACGCGTCAATATCGGCAAGACATCTTGAATCACACATGTTAATTCACACAGATCAAAAACCATACACGTGTGATCAATGTGATCAGTGTTTTCGACAGAAACAACTACTTAAGAGACATCAAAACTTATATCATAATCCTCAATACATTCCTCCTCCGCCTAGAGAAAAGACACACGAATGTCCAGAATGTGGGCGCGCTTTTAGACATAAGGGTAATTTAATTAGACATATGGCTGTTCACGATCCTGATTCGGCAGTTGAGGAACGCCAGTTGGCTTTGAAATTGGGACGCCAAAAGAAAGTACAAATAATCGATGGGCAACCAGTGGAGGTTATTTCGAATATCGATGGTTCGGAAGACGACGAAGGCGACGATATAGTAGCTGTAGAAGGGTCTGATGGTCAGCAATACGTCGTTTTAGAAGTTATACAACTTGCTGACGGCGAGGATCATTCCATGGTGGGCAGCGAAAATAATTCCGGTTTGATTACTGGTGGAATTCTAGCTGATTCAGATATCAATGAGGAGGTAATAAAAGCTTTACAGTCCGCAAGGCGAGAAGGAAGGACAGAGGAGGAAAAAATCACTGCAGTTAGGGATATGGAAAACTGCTTCGGATTTGATGATGAAGAAGACGATGATGACGAGGATGAAAACATAGAAGGAGGAAGTGAAACAATTACGTTGTTAGGCGACATAGATTAA
Protein Sequence: MTSTQFSQDPIKLEGVDSSENVTEIQSYLEGFQKEIEGSDGTIQHVTALQTDGDEADVEAEGGTYFVDQAGHYYYQAKGQGQPVMTVMSAAINDVSEEGEEFIINQENDEEGDEGEDPIPEDAPNHILINSGNAYQKVTVVPADTNTGELSYVLIVQNPEDIKEGDQTDGDQDMTVYDFDENEDGAPIDSEAEDDKSKIVKIFHRKSQVVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHACKYCEAAFTTSGELVRHVRYRHTHEKPHKCNECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICKARFTQSNSLKAHKLTHNIGEKPIFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYSYKLHNKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYTCDQCDQCFRQKQLLKRHQNLYHNPQYIPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPDSAVEERQLALKLGRQKKVQIIDGQPVEVISNIDGSEDDEGDDIVAVEGSDGQQYVVLEVIQLADGEDHSMVGSENNSGLITGGILADSDINEEVIKALQSARREGRTEEEKITAVRDMENCFGFDDEEDDDDEDENIEGGSETITLLGDID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01345888;
90% Identity: iTF_01284988;
80% Identity: -