Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069435.1:104797660-104799466[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.016 3.9 10.7 5.8 1 23 139 161 139 161 0.98

2 15 0.17 40 7.5 3.2 1 23 167 189 167 189 0.98

3 15 2e-06 0.00047 23.1 5.4 1 23 199 221 199 221 0.99

4 15 0.00078 0.19 14.9 8.3 1 23 227 250 227 250 0.98

5 15 1.6e-06 0.00039 23.3 3.0 1 23 256 278 256 278 0.99

6 15 7.5e-07 0.00018 24.4 1.2 1 23 284 306 284 306 0.99

7 15 0.011 2.7 11.2 5.9 1 23 312 334 312 334 0.99

8 15 2.5 6e+02 3.9 0.0 12 23 374 385 364 385 0.92

9 15 1.1e-05 0.0025 20.8 2.7 1 23 391 413 391 413 0.99

10 15 4.5e-06 0.0011 21.9 2.3 1 23 419 441 419 441 0.99

11 15 0.0028 0.68 13.1 9.1 1 23 447 469 447 469 0.98

12 15 0.0001 0.025 17.6 4.9 1 23 475 497 475 497 0.98

13 15 0.032 7.7 9.8 6.2 1 23 503 525 503 525 0.98

14 15 0.0022 0.52 13.5 4.4 1 23 531 553 531 553 0.99

15 15 0.003 0.71 13.1 4.1 1 23 559 582 559 582 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.016	3.9	10.7	5.8	1	23	139	161	139	161	0.98
2	15	0.17	40	7.5	3.2	1	23	167	189	167	189	0.98
3	15	2e-06	0.00047	23.1	5.4	1	23	199	221	199	221	0.99
4	15	0.00078	0.19	14.9	8.3	1	23	227	250	227	250	0.98
5	15	1.6e-06	0.00039	23.3	3.0	1	23	256	278	256	278	0.99
6	15	7.5e-07	0.00018	24.4	1.2	1	23	284	306	284	306	0.99
7	15	0.011	2.7	11.2	5.9	1	23	312	334	312	334	0.99
8	15	2.5	6e+02	3.9	0.0	12	23	374	385	364	385	0.92
9	15	1.1e-05	0.0025	20.8	2.7	1	23	391	413	391	413	0.99
10	15	4.5e-06	0.0011	21.9	2.3	1	23	419	441	419	441	0.99
11	15	0.0028	0.68	13.1	9.1	1	23	447	469	447	469	0.98
12	15	0.0001	0.025	17.6	4.9	1	23	475	497	475	497	0.98
13	15	0.032	7.7	9.8	6.2	1	23	503	525	503	525	0.98
14	15	0.0022	0.52	13.5	4.4	1	23	531	553	531	553	0.99
15	15	0.003	0.71	13.1	4.1	1	23	559	582	559	582	0.96

Sequence Information

Coding Sequence: ATGGCAACCAAcatttgtcgaatttgtttacaaaacatAGTAGATATTGAGCAATATTACTTTCTCAACAATATCAGTgagttaaaactaaaatctaaattgtTGGATGTTCTGCCAGCAATCGATTTAAACATCACACCGAATCCAATTACTTGTAACCGATGTATGATcacaattgaagaaatatatacATTCAAGCAGCTGTGCATACAAACTGAAACTACTATAATGAACTTACAACGAATACCTTGTGACAATGTTTTAAATCATGTTAAAAAGGAAACGATCAAAGAGGAGTTGTTtgataataacattaaaatcgaACCTACAGATCTGCAAATTATCAAAGATGACTGCTTGGGAATCAATAGGGGTATGTCTGTATGCATGGAAGAATCTTCAGAAACGGAATTATATCATTGTCATGACTGTGATttcaaaacaaatgaaaaaacaaatatgattCAACATTTGAAGACACACAAGATCAGCAGGCCATTTCAATGCAACATGTGTAATTTTTCtactagttttaaaaatgtatcaagaCGTCATATGCGTTTACACGTTTGTACAGACATAGAAGAAAAACTATTCaagtgcaatatatgtgattattgcagtaacCGCAAAGACAATTTGAAAacacatatgcgtaagcacgctgatgaaaaaccatttaaatgccaTACATGTGGTTATTGCAGTAAACACAAGTCTGgtttaaaagaacatattatGAGAaaacacactggtgagaaaccatttaaatgcaatatatgtgattattgcagtatcACTAAATCTGATTTAAACGTGcatatgcgtaaacacactggtgaaaaaccatataaatgcaatgtatgtgattattcCAGTACACAAAGTCAGTTGTTAAAAGCACATATGCgaacgcacactggtgagaaaccatttaaatgtactatATGTAATTATTGCAATAACCGAAGAGACCGTTTGAAActacatatgcgtaagcacggtaatgaaaaaccatttaaatgcaatacatcTGATTATTGCAGTAAACAGGAGTCGCAATTAAAAGTACATAATGAGAAACCATTGAAATGCAATATATCTGATTATTGCGATATCGATAAGACGAATTTGAAAACACATATAATTAAACACACCATTGAAAAACCCTtcaaatgcaatgtatgtgattattgcagtatcACTAAATGggatttaaaagtgcatatgcgtaagcacactggtgaaaaaccatataagtgcaatgtatgtgattattcCAGTACCCAAAGTCAGAtgttaaaaacgcatatgcgtaggcacactggtgaaaaaccatttaaatgtaatgtatgTGATTATTGTAGTTACCGAAAATGTGCTTTGAAACATCATATGCGTCTGCATACCTGtgagaaaacatttaaatgcaatatttgtgattataGCACTTACTACcagaagaatttaaaagaacatatgcataggcacactggtgaaaaaccatttaagtgTAATTTATGTGAATTTTGCAGTAACCGAAAAGGGTGTTTGAATATGCATTTGCGTctgcatactggtgaaaaaccatttaaatgcagtatatgtgattattgtagtTACCGAATGTATACATTGGATctgcatatgcgtaagcacactggtgaaaaaccatttaaatgcaataagtGTGATTATTGTTCTTACCGAAAGGATGCCTTGGAATCACATAATCAGCGTATGCACACTTtagaataa
Protein Sequence: MATNICRICLQNIVDIEQYYFLNNISELKLKSKLLDVLPAIDLNITPNPITCNRCMITIEEIYTFKQLCIQTETTIMNLQRIPCDNVLNHVKKETIKEELFDNNIKIEPTDLQIIKDDCLGINRGMSVCMEESSETELYHCHDCDFKTNEKTNMIQHLKTHKISRPFQCNMCNFSTSFKNVSRRHMRLHVCTDIEEKLFKCNICDYCSNRKDNLKTHMRKHADEKPFKCHTCGYCSKHKSGLKEHIMRKHTGEKPFKCNICDYCSITKSDLNVHMRKHTGEKPYKCNVCDYSSTQSQLLKAHMRTHTGEKPFKCTICNYCNNRRDRLKLHMRKHGNEKPFKCNTSDYCSKQESQLKVHNEKPLKCNISDYCDIDKTNLKTHIIKHTIEKPFKCNVCDYCSITKWDLKVHMRKHTGEKPYKCNVCDYSSTQSQMLKTHMRRHTGEKPFKCNVCDYCSYRKCALKHHMRLHTCEKTFKCNICDYSTYYQKNLKEHMHRHTGEKPFKCNLCEFCSNRKGCLNMHLRLHTGEKPFKCSICDYCSYRMYTLDLHMRKHTGEKPFKCNKCDYCSYRKDALESHNQRMHTLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -