Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069432.1:272419965-272421588[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.017 4 10.7 3.3 1 23 113 135 113 135 0.98

2 14 0.00015 0.037 17.1 2.8 1 23 141 163 141 163 0.98

3 14 0.00021 0.05 16.7 3.1 1 23 169 191 169 191 0.98

4 14 0.00064 0.15 15.2 3.5 1 23 207 229 207 229 0.98

5 14 0.00018 0.043 16.9 6.0 1 23 235 257 235 257 0.98

6 14 1.7e-05 0.0042 20.1 5.9 1 23 263 285 263 285 0.99

7 14 0.00018 0.042 16.9 1.8 1 23 291 313 291 313 0.98

8 14 3.6e-05 0.0085 19.1 3.9 1 23 319 341 319 341 0.98

9 14 0.0002 0.049 16.7 3.1 1 23 347 369 347 369 0.95

10 14 8e-06 0.0019 21.2 2.8 1 23 375 397 375 397 0.98

11 14 4e-05 0.0097 18.9 2.2 1 23 403 425 403 425 0.98

12 14 2.3e-05 0.0055 19.7 0.8 1 23 431 453 431 453 0.98

13 14 6e-05 0.014 18.4 4.5 1 23 459 481 459 481 0.98

14 14 0.0035 0.85 12.8 6.9 1 23 487 509 487 509 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.017	4	10.7	3.3	1	23	113	135	113	135	0.98
2	14	0.00015	0.037	17.1	2.8	1	23	141	163	141	163	0.98
3	14	0.00021	0.05	16.7	3.1	1	23	169	191	169	191	0.98
4	14	0.00064	0.15	15.2	3.5	1	23	207	229	207	229	0.98
5	14	0.00018	0.043	16.9	6.0	1	23	235	257	235	257	0.98
6	14	1.7e-05	0.0042	20.1	5.9	1	23	263	285	263	285	0.99
7	14	0.00018	0.042	16.9	1.8	1	23	291	313	291	313	0.98
8	14	3.6e-05	0.0085	19.1	3.9	1	23	319	341	319	341	0.98
9	14	0.0002	0.049	16.7	3.1	1	23	347	369	347	369	0.95
10	14	8e-06	0.0019	21.2	2.8	1	23	375	397	375	397	0.98
11	14	4e-05	0.0097	18.9	2.2	1	23	403	425	403	425	0.98
12	14	2.3e-05	0.0055	19.7	0.8	1	23	431	453	431	453	0.98
13	14	6e-05	0.014	18.4	4.5	1	23	459	481	459	481	0.98
14	14	0.0035	0.85	12.8	6.9	1	23	487	509	487	509	0.98

Sequence Information

Coding Sequence: ATGAAAGAAACCGAGCAGTATCACGTTATAAACAACGACAATGAGTTAAAACTACAAGCGAAACTATTAGAGCTGTTGCCTAGCATTGACTTGAACATCACACGTAACCCAATTATTTGTAACCGATGTATGATTACAGTTGGGGAAATACTCGTTTTCAAGCAACTGTGCTTGCAAACCGAAATCACTCTAAGGAACTTGCGACGACCAAAGCCTTTTAATGATGTTGTAACTTATATTAAAACAGAGATAATTAAAGAAGAGTTTATTGATGATGACATTAAAGTTGATACAGATTTGCCTGTATATATTGAAGAACCTACAAAAACGGAATTGTATTATTGCCACAACTGTGACTTTAACACTAACAAGAAAAGGAATTTGATTCCACACAtgaaaatacataaaagcaTTGTGTTGTTTCGGtgcaatatttgtaattatagcTGTGTGAAAAAGTGGTTGCTTAAACAACATTTGCAAATACACACTGACGAGAAACCATATAAATGCACTAAATGTGATTACAAAACGGTAAGAAAACAAGCACttcaaaagcattttttaacacACGCCAAAAAACACTTATATAAAAAGACTTCGATCTGTAACGAACTGTTTGTATGTAAAACTTGTGAGTTCTCTACGCAACATAATTGGCAATTAAAGAGACACATGCTAACTCACACTTTGGTCAAACCATTTGTTTGTGAAACGTGTGGGTTTTCTACCCGACAAAAGTGCCATTTAAAGACACACATGCTGACTCACAGTTCAAATAAACAGTTTCGTTGCGAAACTTGTGGGTTTTCTACTCGCCATCAGAAGTCTTTAAAGAAACACATGAAGACTCACGTCCCTGCGACACCGTTTGTTTGTGAAAATTGTGGCTTCTCAGCTCAATATAAGTGGCATTTAAAGAGACACATGCTGACTCACAGTTCGGAAAAACCATTTGTTTGTGAAGTTTGTGGGTTTTCTACCCGACAGAACTGCCATTTAAAGAGACACATGCTGATTCACATCTCGGTAAAGCCATTTCTTTGTGCAACGTGTGGCTTCTCTACTAGACAAAAGTACCATTTAAAGACACACATACTGACTCACAGTTCGAATAAACAGTTTGTTTGCGAAACTTGTGGGTTCTCTACTCGCTATCAGAAGTCTTTAAAGAAACACATGAAGACTCACGTCTCTGCGGCACCATTTGTTTGTGCAAATTGTGGGTTTTCTACTCAACATAAATCGAATCTAAAGACACACATGCAGATTCACAGTTCGAATAAACCATTTATTTGTGCAACTTGTGGGTTTGCTACTCGACAAAAGGGCCATTTGAGGGCACATATGCTGACTCACAGTTCGGTAAAATCATTTGTCTGTGAAACTTGTGGGTTTTCTACTTGCTATCAGAAGTCTTTAAAGAAACACATGCAGACTCACGTCTCTGCGACACCATTTGTTTGTGAAAATTGTGGCTTCTCCGCTCAACATAAGTGCCATTTAAAGAGACACATGCTGACTCACAGTTTGGAAAAACCATTTGTTTGTGAAGTTTGTGGGTTTTCTACCTGA
Protein Sequence: MKETEQYHVINNDNELKLQAKLLELLPSIDLNITRNPIICNRCMITVGEILVFKQLCLQTEITLRNLRRPKPFNDVVTYIKTEIIKEEFIDDDIKVDTDLPVYIEEPTKTELYYCHNCDFNTNKKRNLIPHMKIHKSIVLFRCNICNYSCVKKWLLKQHLQIHTDEKPYKCTKCDYKTVRKQALQKHFLTHAKKHLYKKTSICNELFVCKTCEFSTQHNWQLKRHMLTHTLVKPFVCETCGFSTRQKCHLKTHMLTHSSNKQFRCETCGFSTRHQKSLKKHMKTHVPATPFVCENCGFSAQYKWHLKRHMLTHSSEKPFVCEVCGFSTRQNCHLKRHMLIHISVKPFLCATCGFSTRQKYHLKTHILTHSSNKQFVCETCGFSTRYQKSLKKHMKTHVSAAPFVCANCGFSTQHKSNLKTHMQIHSSNKPFICATCGFATRQKGHLRAHMLTHSSVKSFVCETCGFSTCYQKSLKKHMQTHVSATPFVCENCGFSAQHKCHLKRHMLTHSLEKPFVCEVCGFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -