Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069435.1:105567315-105569363[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.77 1.8e+02 5.5 0.1 3 23 132 153 130 153 0.92

2 13 7.4 1.8e+03 2.4 2.0 3 23 161 178 161 179 0.89

3 13 7.7e-05 0.018 18.1 2.6 2 23 184 205 183 205 0.97

4 13 1.6e-06 0.00038 23.4 4.3 1 23 211 233 211 233 0.99

5 13 0.00099 0.24 14.6 1.8 1 23 239 261 239 261 0.99

6 13 3.1e-07 7.4e-05 25.6 0.7 3 23 304 324 303 324 0.99

7 13 0.00037 0.088 15.9 0.9 1 23 330 352 330 352 0.99

8 13 2.6e-06 0.00063 22.7 3.3 1 23 358 380 358 380 0.97

9 13 3.6e-06 0.00087 22.2 2.5 2 23 386 407 385 407 0.97

10 13 8.4e-06 0.002 21.1 0.8 1 23 413 435 413 435 0.98

11 13 3.1e-07 7.4e-05 25.6 5.5 1 23 441 463 441 463 0.98

12 13 0.00013 0.031 17.4 5.3 1 23 469 491 469 491 0.98

13 13 2.6e-05 0.0061 19.6 2.3 1 23 502 525 502 525 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.77	1.8e+02	5.5	0.1	3	23	132	153	130	153	0.92
2	13	7.4	1.8e+03	2.4	2.0	3	23	161	178	161	179	0.89
3	13	7.7e-05	0.018	18.1	2.6	2	23	184	205	183	205	0.97
4	13	1.6e-06	0.00038	23.4	4.3	1	23	211	233	211	233	0.99
5	13	0.00099	0.24	14.6	1.8	1	23	239	261	239	261	0.99
6	13	3.1e-07	7.4e-05	25.6	0.7	3	23	304	324	303	324	0.99
7	13	0.00037	0.088	15.9	0.9	1	23	330	352	330	352	0.99
8	13	2.6e-06	0.00063	22.7	3.3	1	23	358	380	358	380	0.97
9	13	3.6e-06	0.00087	22.2	2.5	2	23	386	407	385	407	0.97
10	13	8.4e-06	0.002	21.1	0.8	1	23	413	435	413	435	0.98
11	13	3.1e-07	7.4e-05	25.6	5.5	1	23	441	463	441	463	0.98
12	13	0.00013	0.031	17.4	5.3	1	23	469	491	469	491	0.98
13	13	2.6e-05	0.0061	19.6	2.3	1	23	502	525	502	525	0.94

Sequence Information

Coding Sequence: ATGCAACTGGAAAAAATTTGTCGCGGATGTTTATCTGAAGGCGAAAACATGATCAACATGTCCCACAGCGATATTTTCCATAAATTCCTTCTTGTTACAAATTTAACCAAAGCGGATGAAGTCCCGAACGTTCCTTTAAACTTGTGCCGCTCGTGCGAAGAAAAACTGAACATTTCTTTCAGTTTTAAAGAATTATGCCAAAAATCGCACGAGACTTTATTAAGTTATGCAAACACTCCTGTGTGCATAGATATTAATGAAGAGTTATATGAAGAAGAATCTGCACAAGATGGTCATGGCGATAAAAAAAAGTCACGGTTAGAACGGTTTTCTCATCATAAGGTATCAGAAGCAATTGCAGATTCGCAAAAGAGTTTTTATGCAAGTACAAATTGCCTTTGGTGTAACTTTGCTGGAAGCAACTCACGAgcgttgtctatacatatatcgTTAGTGCATagGGAGTTTAAGCCACATTGGTGCCGGGACTGTAATGAAGAATTCGGAGATTTAAAAGGTCATATGGAGAAACATCACGGCAATGACGTAACTTGCAAATTTTGTGACAAAAAATTCCAATCCAAAGGACATTTGACTGAACATGTACGTGGTCATTCAGatttgagACCATTTCAGTGTACGTTTTGTGAGAAACGTTTTGTTTCACAGAGTCACTTAAACGTGCATCTCAGAAAACACACTAAAGAGAAACCGTATCAATGTCAGTCGTGCATTAAATCTTTTGCGCAACTACGTCAATTAAAGGATCATTTGAAAAAACATGAAGAGGCTGATGATAAagaattttttatagCCACGCAGAACTTTTGCATTAAGTGTCAAAAGAAGGTGCGTAGTTTGGTAGTTCATATGAAGCAGGTACATTCCAATGAGGGGTCTAATAAGTTATGTACTGTATGCGGAAAACAGTTTAAGACTGCTTCCAAATTAAAAGTTCATATGCGCGTACATACAGGTGAAGCACCTTATAAGTGTACGTATTGTGATAAGAGGGTGGCAACTCGTAATCAGATAGTTATGCATGAACGCACTCACACTGGAGAGAGACCACATGTTTGCCATGTGTGTGGAAAGaatttttccCAATCTAGCGTGCTTAATACTCACATGAAGCTACACACGGGTCCTACTATAAGTTGTAAGATATGCGAAAAGCGCTTTTGTAGACCGGCTCAACTACGTTTACATTTAAGAAGGCATACtgGGGAAAAACCGTACATATGCAGTGAGTGTGGCCAGGCGTTTATACAGCGCAGCCATCTGGTAGAACATAACAAAACTCATAGCGATCTTCGCCCATACCACTGTAGTTACTGCGACAAAGCTTTTAAACAAAGTTCTTCGTTGAAACATCACATTCGGATACATTTAGgagaaaaaccatataaatgtAATCAGTGCTCATACGCATGTCGGCAGAGTTATAGTTTAACGCAGCACATGAAGCAACATTCTATTGATAAACCAAGAACTGACCGACCACACTTTTGTTCAATGTGTAGCAAAAGTTTTTCAACAGCTTCTATGCTTACAtctcatttaaataatattcacaatgtatcttttcttgttttgtcaTAA
Protein Sequence: MQLEKICRGCLSEGENMINMSHSDIFHKFLLVTNLTKADEVPNVPLNLCRSCEEKLNISFSFKELCQKSHETLLSYANTPVCIDINEELYEEESAQDGHGDKKKSRLERFSHHKVSEAIADSQKSFYASTNCLWCNFAGSNSRALSIHISLVHREFKPHWCRDCNEEFGDLKGHMEKHHGNDVTCKFCDKKFQSKGHLTEHVRGHSDLRPFQCTFCEKRFVSQSHLNVHLRKHTKEKPYQCQSCIKSFAQLRQLKDHLKKHEEADDKEFFIATQNFCIKCQKKVRSLVVHMKQVHSNEGSNKLCTVCGKQFKTASKLKVHMRVHTGEAPYKCTYCDKRVATRNQIVMHERTHTGERPHVCHVCGKNFSQSSVLNTHMKLHTGPTISCKICEKRFCRPAQLRLHLRRHTGEKPYICSECGQAFIQRSHLVEHNKTHSDLRPYHCSYCDKAFKQSSSLKHHIRIHLGEKPYKCNQCSYACRQSYSLTQHMKQHSIDKPRTDRPHFCSMCSKSFSTASMLTSHLNNIHNVSFLVLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -