Alei102399.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aquatica leii
Gene Symbol
-
Assembly
GCA_035610365.1
Location
CM069438.1:44128346-44152101[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0011 0.26 14.4 0.2 1 23 305 327 305 327 0.95
2 12 3.2e-05 0.0078 19.2 1.6 1 23 335 357 335 357 0.99
3 12 0.0001 0.025 17.6 0.3 2 23 365 386 364 386 0.97
4 12 3.4e-05 0.0082 19.2 0.8 1 23 392 414 392 414 0.98
5 12 0.00024 0.056 16.5 4.7 1 23 421 443 421 443 0.99
6 12 0.0014 0.34 14.1 0.7 1 23 449 471 449 471 0.96
7 12 2.4e-05 0.0058 19.6 0.1 1 23 477 499 477 499 0.98
8 12 3e-07 7.3e-05 25.6 1.1 1 23 505 528 505 528 0.96
9 12 1.8e-05 0.0044 20.0 0.5 1 23 534 557 534 557 0.96
10 12 4.3e-05 0.01 18.9 2.4 1 23 563 585 563 585 0.99
11 12 0.00022 0.053 16.6 0.4 1 23 591 613 591 613 0.94
12 12 0.0065 1.6 12.0 0.1 1 21 619 639 619 643 0.92

Sequence Information

Coding Sequence
aTGTCGACTGCGTCCACGGCAGCAAAAGAAAACCCCCATTGTTTAGTATGCAACGCTCGAGTAGGTGTATCAACACGCACTTCGCTACAAATCTTCGGCAAAGAAAGCCAAACCTGTACGGAAAAACCGATAAGCCAAGTTATATCAcaagttttagaagaaaatataaGCGAAGACTCAGTACATTCTTTACTCCTATGcaagaagtgttttaaattGCTCGACGAATTAGAAGAGCTCGAGCAAAGAATCGACGAAATTAAAGATGAAATCGTCGGTAATTATCGACGTTCTgtcaatattgttaaaaatggtgAGAACGACGACGAAACAAAACCGGAATTTAAAGACGATTTAATGCCAAAAACTCTCCTGGAAATACCATCGTCTGATGAGGATACCGAAgcTATTAACGAAAAAGAAACGTTCGATACTATGGAAGATATCGAAATGCAACTTGTTAAGATTCATGGGGGTAAACCAGAAGCAAGTAAATCGCCACAACAAAACGTTGAAGATGTTAcccaatttcaaaattttgacacCGATATAATGGATGCCGGTGCTTTGAATCAGTCGTCGGATTCTGATTATGAACCACCCGGTGGGGATAACACTGAGGCGTTGTTACAAGCTGCGGCGATTGCCGAAAAAAATCTTGAAGTTCAAATTAAGTCCGAACCAGGGGTTGCATCTCCTGAGAAACCCAACATACTAAAAAGGAAAGAAATTTATGACGATtctaaaaaaattccttttttaaataagaaatttaaagaagaaattgttaCTCCGGTTGTGACCCGAGAAGGCGCGTTATATACGTGTTTATTATGCGAAGGCGAAGAAACTGTATGCGGCGAAGCCAAAGCCATTATTTTGCACGTACGTCAAACTCACGATACCCGCTTGTACATATGCGACGTATGCGGCCAAGATTTCAGAAAACGCAACGAACTATCGATGCATCTAGACGAACACGTTGCTACCGAAGAGGGCGACTTTCAATGCGAAATTTGTAACAGAATATTCAGTAATTTGCGATTGTTTCGCATACACAAGCGCATGCATTATCCCCAAAACAAAGCTTGGAAATGTGATACGTGTGGGAAGAAATACAGCTCGCGGAATCTATTAGATGAACACATTAACGTCCACACCGGGCTACGCCCTTACATCTGCGCAACGTGTGGTAAAGATTTCGCTTCCAAGTACACGTTTAAAGCCCACGAAAAAACTCACGAGGTTAGACCACGCCCCTTTCAATGCCAACACTGCAACAAATCGTTCCTAAGTCAGCAGAATTTATCGCAACACGAAAGGACACATTTAGGCATCAAGGAGTTTTCTTGCCAGTTATGttCGAAGCAGTTTGGATCGGCACATAATCTCGAGGTGCATTCGATCGTTCACACCGGTTATAAACCGTTCGTGTGCGGGCTTTGCGGTAAAGCCTTCGCTCGTAAAGCCGAAATACGAGACCACGAACGTACTCACACCGGCGAGCGACCTTATCAATGCGAATATTGCGGCGCAACTTTTAGTCAACGATCGAATCTTCAGTCACATAAACGCGCAACGCACTACGACGACAAACGATATAAATGCGAAATGTGCGGGAAAGGTTTCAAACGAAGAAGGTTGTTAGATTACCACATAAAAGCCGCACACACCGGCGAGCGACCGTATAAGTGCCAAGTTTGCGAAGCTACTTTTGTTTATCCGGAACATTTCAAGAAGCATCGGCGTATCCACACTGGGGAGAAACCGTTTCTTTGCGAAGTTTGTGGAAAAGCTTTTAATAGTCGCGATAATCGAAACGCGCATAGGTTCGTGCATTCTGATAAGAAGCCTTACGAGTGTTTAGTGTGCGGTGCTGGGTTTATGCGCAAACCGTTGTTGTACCAGCATATGCAGGATCAGGGACATTTGAACGATACAATTGTGGTGAACCAACCTCGGCTGACTACGGACGATGATCAAATAATTACGGTAAATGCCGATGGGGAAATGGAAATAGTCGAAAACGAAGGTGTCGCGAATTTAGAAACTATAGAGGTAGCGGACGAAGACGCAACGGAAGATTCGAAATTGTACATTGCCGAACACATGCTAGTCGAAGGAGGCGAAATTTTCGAAGACACCAAAACTTTCGTGAATTTAGATGAGGATAACATGGCAGAAACGGAAGGCATCGAACATATTATTATAGATGGGCAGCAAATACAGTTTGCTGAAGAAGGAGAAGGGGAAGAAGAGACCGAAGAGCCAACCGAAGATGGTCAACACATGGTTGCCGGAGACGATATAGAAGAAATGATTGCAAACGGTAACGTCTTAAACGGAAAGACGCAGGTTATCGAAACGCCGGATGGGCCTATACATTACGTGCACGTTCGAATCCCCAACGATCACGGTGAAGAAGAGGAAGCGTGGCTGAAGATTGTTAGAAAgtaa
Protein Sequence
MSTASTAAKENPHCLVCNARVGVSTRTSLQIFGKESQTCTEKPISQVISQVLEENISEDSVHSLLLCKKCFKLLDELEELEQRIDEIKDEIVGNYRRSVNIVKNGENDDETKPEFKDDLMPKTLLEIPSSDEDTEAINEKETFDTMEDIEMQLVKIHGGKPEASKSPQQNVEDVTQFQNFDTDIMDAGALNQSSDSDYEPPGGDNTEALLQAAAIAEKNLEVQIKSEPGVASPEKPNILKRKEIYDDSKKIPFLNKKFKEEIVTPVVTREGALYTCLLCEGEETVCGEAKAIILHVRQTHDTRLYICDVCGQDFRKRNELSMHLDEHVATEEGDFQCEICNRIFSNLRLFRIHKRMHYPQNKAWKCDTCGKKYSSRNLLDEHINVHTGLRPYICATCGKDFASKYTFKAHEKTHEVRPRPFQCQHCNKSFLSQQNLSQHERTHLGIKEFSCQLCSKQFGSAHNLEVHSIVHTGYKPFVCGLCGKAFARKAEIRDHERTHTGERPYQCEYCGATFSQRSNLQSHKRATHYDDKRYKCEMCGKGFKRRRLLDYHIKAAHTGERPYKCQVCEATFVYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCGAGFMRKPLLYQHMQDQGHLNDTIVVNQPRLTTDDDQIITVNADGEMEIVENEGVANLETIEVADEDATEDSKLYIAEHMLVEGGEIFEDTKTFVNLDEDNMAETEGIEHIIIDGQQIQFAEEGEGEEETEEPTEDGQHMVAGDDIEEMIANGNVLNGKTQVIETPDGPIHYVHVRIPNDHGEEEEAWLKIVRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00003186;
90% Identity
-
80% Identity
-