Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069434.1:25679194-25687786[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.1e-05 0.0073 19.3 3.2 2 23 204 225 203 225 0.98

2 11 2.4e-06 0.00056 22.8 1.2 1 23 231 253 231 253 0.99

3 11 6.2e-05 0.015 18.4 4.6 1 23 261 283 261 283 0.99

4 11 0.00058 0.14 15.3 1.5 1 23 289 311 289 311 0.98

5 11 0.0092 2.2 11.5 0.4 1 23 323 345 323 345 0.96

6 11 1.2e-06 0.00029 23.7 2.8 1 23 351 373 351 373 0.96

7 11 1.9e-05 0.0046 20.0 0.5 1 23 379 401 379 401 0.99

8 11 1e-06 0.00025 23.9 0.6 1 23 407 429 407 429 0.98

9 11 6.8e-05 0.016 18.2 1.5 2 23 436 457 435 457 0.97

10 11 0.00017 0.042 16.9 0.1 1 23 463 485 463 485 0.98

11 11 1.2e-06 0.00029 23.7 0.2 1 21 491 511 491 512 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.1e-05	0.0073	19.3	3.2	2	23	204	225	203	225	0.98
2	11	2.4e-06	0.00056	22.8	1.2	1	23	231	253	231	253	0.99
3	11	6.2e-05	0.015	18.4	4.6	1	23	261	283	261	283	0.99
4	11	0.00058	0.14	15.3	1.5	1	23	289	311	289	311	0.98
5	11	0.0092	2.2	11.5	0.4	1	23	323	345	323	345	0.96
6	11	1.2e-06	0.00029	23.7	2.8	1	23	351	373	351	373	0.96
7	11	1.9e-05	0.0046	20.0	0.5	1	23	379	401	379	401	0.99
8	11	1e-06	0.00025	23.9	0.6	1	23	407	429	407	429	0.98
9	11	6.8e-05	0.016	18.2	1.5	2	23	436	457	435	457	0.97
10	11	0.00017	0.042	16.9	0.1	1	23	463	485	463	485	0.98
11	11	1.2e-06	0.00029	23.7	0.2	1	21	491	511	491	512	0.96

Sequence Information

Coding Sequence: ATGGACATAAAACCGGAACAAATGCAACAGCAGCAGCAGCAACAATTCGATATAAGCAAAATATGTCGAGCTTGTCTTACAGAAAAAGGTGAAATGCGTTCGGTGTTTCTAGCCGATGAATCCATTGGACAAACTATGAGGCTTTCCGAAATGATAATGGGTTTTTCTAGTGTTCAGATTGAAAATGGAGATGGTTTACCAGGTTCGATATGTCTTCAATGCATTCACCAAGTAAGCAGAGCGTTTTCGTTCAAACAACTATGCGAACAGTCGGATGCAAATTTAAGGCAATATCTCGGAAAACCATTACATCCAAAACCGTGTAAGCAGGAAGATGATGATGTATCGCACGACATATATTCGTCAAGTTTCATGCTGGACAATTTTGGTCTCGAAGATTCGTCGAACGACAGTGACGATTCGTTTAAGCAAGATTTTACGTTATTAAGCCAAATGAACTCGGAAAATCCAAGCGACGAAAAAGCCATAGCAcaaaaacaactattaaaagCGGCAAAGTTGCAAAAGTGCAAACTTACTAAGAAAAAGCTTCTAGCTAAAGCAGGAGGAAAAGCAAgcgttttaaaaaaattgaaacgtaACACCAATCAGTGTAATGTATGCAAAaagcaatttataaatttaaaatcgtttcgCAAGCATCTAAGGACACATATAGAAGATCGTCCTTATAAGTGTAAACTATGTCCTAGAGGCTTCACCGAagagaattatttaaataatcacaTGCGAACTCACATGCCAGAAGATCAGAAACCTTACCAATGTAAACTTTGCAATAAGAGGTTTATCCAtacaactttattaaataaacatttactgAAACACAGTGGGGAAAAACCGTTTGTTTGCAAAATCTGCAATAAAGGCTGCTACGCAGAAAATAGTTTGTTGAAGCATATGAAAATTCACGAGAAGAAAGAAGGTGATCCTGGATTGTTGAAACATATTTGTGATTATTGCAAGAGCGAGTTTCCCGATGCCAATACTTTAGACGTTCATATTAAGCAACACACTGGTGATCGGCCGTTTCTTTGTAACATGTGTGGGAAATGTTTTCCTCAACGATTCAATTTGGAGTTACATTTGCGAACGCATACAGgcGAGCGTCCTTTTACATGCGAGGTTTGTAAAAACGGGTATGTATCAAAAGCTAGTTTGAAAATACATATGAGAACGCACACGAACGAAAGACCATTCGTTTGTGATTTTTGCGGAAAGGCTTTTAGACAATCGGGCGATCTAACGAGTCATAAAAGGTTGCACGGCACGGAAAAACCGATAGAATGTTCTGTTTGTCAAAAGaggttTACGACAGTGATGAAACTAAAATATCACATGAGGAATCACACTGGCGAACGTCCATACGTATGTAGTGTTTGTGGTAGAGGATTTACAGTCAATACGATTTTATTGCGTCATTTGCGGGTTCATTCCGGTGAAAGGCCCTACGTATGTGTTACTTGTGGAAAAGCCTTTTCTCAATCGAGCACTTTAAATACTCACATGAAGCTCACTTTAAAGTTTAAGTTAATTGTGCAAGACGACACGTGA
Protein Sequence: MDIKPEQMQQQQQQQFDISKICRACLTEKGEMRSVFLADESIGQTMRLSEMIMGFSSVQIENGDGLPGSICLQCIHQVSRAFSFKQLCEQSDANLRQYLGKPLHPKPCKQEDDDVSHDIYSSSFMLDNFGLEDSSNDSDDSFKQDFTLLSQMNSENPSDEKAIAQKQLLKAAKLQKCKLTKKKLLAKAGGKASVLKKLKRNTNQCNVCKKQFINLKSFRKHLRTHIEDRPYKCKLCPRGFTEENYLNNHMRTHMPEDQKPYQCKLCNKRFIHTTLLNKHLLKHSGEKPFVCKICNKGCYAENSLLKHMKIHEKKEGDPGLLKHICDYCKSEFPDANTLDVHIKQHTGDRPFLCNMCGKCFPQRFNLELHLRTHTGERPFTCEVCKNGYVSKASLKIHMRTHTNERPFVCDFCGKAFRQSGDLTSHKRLHGTEKPIECSVCQKRFTTVMKLKYHMRNHTGERPYVCSVCGRGFTVNTILLRHLRVHSGERPYVCVTCGKAFSQSSTLNTHMKLTLKFKLIVQDDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -