Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069436.1:14380194-14381801[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00011 0.026 17.6 1.6 1 23 159 183 159 184 0.92

2 11 8.5e-05 0.02 17.9 3.4 1 23 189 210 189 210 0.96

3 11 6.8e-07 0.00016 24.5 1.6 1 23 216 238 216 238 0.99

4 11 3.4e-06 0.00082 22.3 1.6 1 23 244 266 244 266 0.97

5 11 0.005 1.2 12.4 2.6 1 23 281 303 281 303 0.96

6 11 2.3e-05 0.0054 19.7 5.7 1 23 322 344 322 344 0.98

7 11 1.8e-06 0.00044 23.2 0.2 1 23 349 371 349 371 0.95

8 11 4.5e-05 0.011 18.8 1.5 1 23 377 399 377 399 0.97

9 11 8.4e-07 0.0002 24.2 4.3 1 23 405 427 405 427 0.98

10 11 4.1e-08 9.7e-06 28.4 0.3 1 23 433 455 433 455 0.98

11 11 6.2e-06 0.0015 21.5 0.6 1 23 461 483 461 483 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00011	0.026	17.6	1.6	1	23	159	183	159	184	0.92
2	11	8.5e-05	0.02	17.9	3.4	1	23	189	210	189	210	0.96
3	11	6.8e-07	0.00016	24.5	1.6	1	23	216	238	216	238	0.99
4	11	3.4e-06	0.00082	22.3	1.6	1	23	244	266	244	266	0.97
5	11	0.005	1.2	12.4	2.6	1	23	281	303	281	303	0.96
6	11	2.3e-05	0.0054	19.7	5.7	1	23	322	344	322	344	0.98
7	11	1.8e-06	0.00044	23.2	0.2	1	23	349	371	349	371	0.95
8	11	4.5e-05	0.011	18.8	1.5	1	23	377	399	377	399	0.97
9	11	8.4e-07	0.0002	24.2	4.3	1	23	405	427	405	427	0.98
10	11	4.1e-08	9.7e-06	28.4	0.3	1	23	433	455	433	455	0.98
11	11	6.2e-06	0.0015	21.5	0.6	1	23	461	483	461	483	0.95

Sequence Information

Coding Sequence: ATGAATATCGAAGCAATGCAGACATCACAACAATCTATGACCGAAGAAAATACCAGTTACACAATAAATTATgatcaattttcaaatatatgcCGAACTTGTCTAGCAGAAGGTCCAAATAGGCCTATATTTGACGTGTTTTATGAAGAAAAATCAGTAAACGATCTTCTGCAAATGTACACTGCAATAGAGGTTCAACTCGACGATGATTTACCACAAAATATATGCTGTAAATGTTTATCCGACTTATTtgaaacacatttatttattaagaagtGCCAACAGTCGAATACAACACTTCAGTATGTAGTAAATAGTAAGCATAATATTGAATTCAAACAAGAAACGCAAAAATCTTTTGACGAGTTATTTGAGGAACCagatattgaagaaaaatgtaATACACAACAGAATGATTCAACGAAAATTcggaaatgtaagaaaaaatcGCAATTTATTATTGAGGGTCCACCGTATGAATGCAAAATATGTGATGTATCTtttgaaaatttcgatttatTGAGAGCGCATcgtaaaaaagttaaacatcatGAGATTCGTAAGCACATGTGTACTGTCTGTTCGAAAACATTTACTAGTAGCAAGCTGCGACAACATATGCGCGCACATACTAAAGAGAAACcgtataaatgcaaaatttgttttcaaggTTTTAGTATGTCGGGAAATTTAAAAAGACACATGATGACGCATACAGGAGAACGGCCACATGTTTGTGAAGTGTGCGGCAAGGGTTTCATTCAATCAACTactttacaaaaacataaacaaactcATACAAAAGATGAAAGACTGGGTGGTGATGATAATAGTCCTCATTTTATTTGCAACTGTTGTGGCAGGGGATTTAAAAGGCTAGGTAGTTACAAAGCTCACTTAACAAAGCATTTTTCGGAAAATACTGAAATTAGGAAAATGCTACAAGATAGCGAAATACGCGAACACGAGTGCAATATATGTAAAAgaacttataaaactaaacatCTTCTTAAAGCTCATCAGTTAACACATGGAGAAAAGTCGTTCCTTTGTAGTGATTGTGGAAAGGGTTTTGTCACCAAAGCAGCGTTGCAATCGCACCTTAAAGtccatactggtgaaaaacctcATACGTGTAATGTTTGTAGTAAATCGTTTGCTCATGTAGGTAGTTTTGAAGCACATATGCTTATACACACCGGTCAGAAACCATATAATTGCACTATTTGTAAAAAAGCATTTACTCAATTATCACATCTTAAATACCACTTGAGAACACATAGTGGAGAACGGCCATACATTTGTTCGTATTGTGGGAAAAGTTTTGCTTTAAAAGGAAATTTAACAGTACATATACGTACTCATACTGGTGAAACCCCGTATTTATGTCCTATTTGTGGTAAAGGATTTTATGATTCGAGCAGTATGAAGAAGCACAAAAAGGGTCACGGGATTGAACCTAATATATCATCTTTGGCATCTATGAATATAAGTAACGGTAACATCGAAACTACCAATAGAATTAATTGCATTAATATAAATGCGTCAATTCTAAACTGA
Protein Sequence: MNIEAMQTSQQSMTEENTSYTINYDQFSNICRTCLAEGPNRPIFDVFYEEKSVNDLLQMYTAIEVQLDDDLPQNICCKCLSDLFETHLFIKKCQQSNTTLQYVVNSKHNIEFKQETQKSFDELFEEPDIEEKCNTQQNDSTKIRKCKKKSQFIIEGPPYECKICDVSFENFDLLRAHRKKVKHHEIRKHMCTVCSKTFTSSKLRQHMRAHTKEKPYKCKICFQGFSMSGNLKRHMMTHTGERPHVCEVCGKGFIQSTTLQKHKQTHTKDERLGGDDNSPHFICNCCGRGFKRLGSYKAHLTKHFSENTEIRKMLQDSEIREHECNICKRTYKTKHLLKAHQLTHGEKSFLCSDCGKGFVTKAALQSHLKVHTGEKPHTCNVCSKSFAHVGSFEAHMLIHTGQKPYNCTICKKAFTQLSHLKYHLRTHSGERPYICSYCGKSFALKGNLTVHIRTHTGETPYLCPICGKGFYDSSSMKKHKKGHGIEPNISSLASMNISNGNIETTNRINCININASILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -