Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069434.1:36248092-36249964[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.4e-05 0.0034 20.4 1.1 1 23 181 203 181 203 0.98

2 12 4.9e-06 0.0012 21.8 4.6 1 23 209 231 209 231 0.98

3 12 9.4e-07 0.00023 24.1 1.8 3 23 239 259 237 259 0.96

4 12 4e-06 0.00097 22.1 0.5 1 23 265 287 265 287 0.98

5 12 2.2e-06 0.00052 22.9 0.7 1 23 293 315 293 315 0.97

6 12 0.00022 0.054 16.6 1.1 1 23 321 343 321 343 0.96

7 12 2.6e-08 6.2e-06 29.0 0.7 1 23 349 371 349 371 0.97

8 12 1.4e-06 0.00033 23.6 0.1 1 23 377 399 377 399 0.99

9 12 5.1e-07 0.00012 24.9 3.6 1 23 405 427 405 427 0.99

10 12 1.6e-06 0.00038 23.3 0.2 1 23 433 455 433 455 0.96

11 12 3.2e-05 0.0076 19.3 1.9 1 23 461 483 461 483 0.97

12 12 8.6e-07 0.00021 24.2 0.5 1 23 489 511 489 511 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.4e-05	0.0034	20.4	1.1	1	23	181	203	181	203	0.98
2	12	4.9e-06	0.0012	21.8	4.6	1	23	209	231	209	231	0.98
3	12	9.4e-07	0.00023	24.1	1.8	3	23	239	259	237	259	0.96
4	12	4e-06	0.00097	22.1	0.5	1	23	265	287	265	287	0.98
5	12	2.2e-06	0.00052	22.9	0.7	1	23	293	315	293	315	0.97
6	12	0.00022	0.054	16.6	1.1	1	23	321	343	321	343	0.96
7	12	2.6e-08	6.2e-06	29.0	0.7	1	23	349	371	349	371	0.97
8	12	1.4e-06	0.00033	23.6	0.1	1	23	377	399	377	399	0.99
9	12	5.1e-07	0.00012	24.9	3.6	1	23	405	427	405	427	0.99
10	12	1.6e-06	0.00038	23.3	0.2	1	23	433	455	433	455	0.96
11	12	3.2e-05	0.0076	19.3	1.9	1	23	461	483	461	483	0.97
12	12	8.6e-07	0.00021	24.2	0.5	1	23	489	511	489	511	0.99

Sequence Information

Coding Sequence: atGGCTTTACAAACTATCCAAACCGAAAAAATTTGTAGGACGTGTTTATCAGAAGACACAAACATGCGTTCTGTTTTTAGTATAGAAGATAATAGCATAGGTGAAACTACTAAACTATATGAAATGCTTATGTCCTGTGCCTCTGTGCAGGTTGTAGAAGGAGACGGCTTACCTGGTCAAGTCTGTTTACAGTGTGTTCATTATATTACAAGAGCATTCTCATTTAAGCAATTATGTGAAAGATCGGATTCAACTTTGAGGGACCTGCTTGGTAAACCAGTATTAAACCCTTATATAACACAAATGAAGCCAGATGACCCTTTGCAAACATTTCAAACCTTACAAATAGTAGATCAAAAACCAATAAATGACAACAGTTTAAAAGTAGAAATAATGGAAAATGACCTGCTTCTTCCACTCATAGAAAACTCGGAAAGCGAAAACGATAATTTAGACGGTACCTCTCTTGATGTTAATACTTTTCCTACTAAAAAAgacataaataagaaaaaagttaaagatGACACCGAGCAACCAATTTATGCATGTGAGGAATGTACTGCTTGTTTTACTACATCAGCTGATTTAAAAGTTCACTCACGAACGCATCCAAAATTATCAAAGcatgtttgtaaaacttgtaatCAAGAATTTTCTAGTGCTAGTACCCTTTGCAGGCACATGAGGGTGCATGATGGTGCAAAACGGCATCTATGTAGTGAGTGTGGTAAAGGTTTTGCACGTTCTGATGACCTCACACGTCACTTTCGTACACACACAGgagaaaaaccatttcaatgtaAACTATGTGGAAAAGCGTTTGCTCAGTCATTTAGATTGTTGGAACATATGCGGGCACATGCAAACgaaaaaggttttatttgttCAGTTTGTGGTAAAACTTTTTCAAGGTATACAAGCCTCGCTGCTCATAATAAAACACATAGTGGGATCAAAAGCCATGCATGTGGAATTTGTGGAAAGCGattatgtGGGTCTGGTTCATTAGCCATGCATATGAAAACGCACGCTGGTATAAAAGATCATATATGTCCTTATTGCGGCAAAGGATTTACAACACCTAGTAATCTAACCATTCACAAACGTATTCATACAGGTGAACGTCCATACGTATGCAAAGTATGTGGTAAAGGTTTTCCAGATCCTTCACGTTTAACGGTTCATTCACGTACCCATAGTGGGGTAAAGCCTTATGTATGTTCTCATTGTGGTCGTGGCTGTGTTAGTTCTtcccaattaaaaaaacatatgcgCATACATACTGGAGAAAAACCTTATCTCTGCACGCTTTGTCCGAAAGCATTTCCTCGAAGCGAAGATCTCAGAATTCACATAAAAACACACACAGGTGATCGTAATCATATATGTAGTATTTGTAAAAAAGGATTTTATCAAGCGTCAACGTTAAAAGTTCATTTTCGTATACACACCGGAGAAAAACCATACACTTGCAATATATGTGACAAATCCTTTGCACAGACTGGACCTCTTTCCACGCACATGAAGACTCAttaa
Protein Sequence: MALQTIQTEKICRTCLSEDTNMRSVFSIEDNSIGETTKLYEMLMSCASVQVVEGDGLPGQVCLQCVHYITRAFSFKQLCERSDSTLRDLLGKPVLNPYITQMKPDDPLQTFQTLQIVDQKPINDNSLKVEIMENDLLLPLIENSESENDNLDGTSLDVNTFPTKKDINKKKVKDDTEQPIYACEECTACFTTSADLKVHSRTHPKLSKHVCKTCNQEFSSASTLCRHMRVHDGAKRHLCSECGKGFARSDDLTRHFRTHTGEKPFQCKLCGKAFAQSFRLLEHMRAHANEKGFICSVCGKTFSRYTSLAAHNKTHSGIKSHACGICGKRLCGSGSLAMHMKTHAGIKDHICPYCGKGFTTPSNLTIHKRIHTGERPYVCKVCGKGFPDPSRLTVHSRTHSGVKPYVCSHCGRGCVSSSQLKKHMRIHTGEKPYLCTLCPKAFPRSEDLRIHIKTHTGDRNHICSICKKGFYQASTLKVHFRIHTGEKPYTCNICDKSFAQTGPLSTHMKTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00978605;
90% Identity: -
80% Identity: -