Alei074901.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aquatica leii
Gene Symbol
-
Assembly
GCA_035610365.1
Location
CM069435.1:105213592-105215505[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0069 1.6 11.9 1.6 1 23 59 81 59 81 0.97
2 20 5e-06 0.0012 21.8 0.7 1 23 87 109 87 109 0.98
3 20 0.00076 0.18 14.9 1.5 1 23 115 137 115 137 0.97
4 20 1.9e-05 0.0047 19.9 0.4 1 23 143 165 143 165 0.97
5 20 3.8e-07 9.1e-05 25.3 2.7 3 23 173 193 171 193 0.97
6 20 2.8e-06 0.00067 22.6 4.5 1 23 199 221 199 221 0.99
7 20 9.3e-05 0.022 17.8 1.3 1 23 227 249 227 249 0.98
8 20 0.00011 0.027 17.5 2.0 1 23 255 277 255 277 0.99
9 20 1.4e-05 0.0033 20.4 1.7 1 23 283 305 283 305 0.98
10 20 0.00067 0.16 15.1 1.0 1 23 311 333 311 333 0.98
11 20 6.4e-07 0.00015 24.6 0.3 1 23 339 361 339 361 0.99
12 20 0.019 4.4 10.6 1.3 1 23 369 392 369 392 0.96
13 20 0.00046 0.11 15.6 1.2 1 23 398 420 398 420 0.98
14 20 1.6e-05 0.0039 20.2 1.1 1 23 426 448 426 448 0.99
15 20 0.00059 0.14 15.3 0.4 1 23 454 477 454 477 0.98
16 20 1.2 2.8e+02 4.9 0.4 1 23 485 507 485 507 0.97
17 20 6.1e-06 0.0015 21.5 1.9 1 23 513 535 513 535 0.99
18 20 0.0074 1.8 11.8 9.3 1 23 541 563 541 563 0.98
19 20 0.0005 0.12 15.5 0.4 1 23 569 592 569 593 0.94
20 20 0.05 12 9.2 5.2 1 22 598 619 598 622 0.90

Sequence Information

Coding Sequence
ATGAACAAAACCGAAGATGTCATCGACACCAAACAAGAAATTACAGTCAATCCCATCGAGAGCACCTTCCACGACATTAAATTAGAAGAAGAATTCAAATCTGAATGGGATGATGATTACTCAATCCAAACGTCGATTAAAACCGAAACGCTAAATGATAACATACCTCGTAAGTTCAATTGCGTACATTGTGAAAAAGGATTTAACTGGAACAGTCAGTTGCTACAACATTTGAAACTACATAGTGATCTCCGACCATTTGAGTGCACGTCATGTCCGAAATCTTTCAAAGATATCAGCTCTTTAAACTCGCATTTAAAGATACATTCGGGTAAACGACCGTTTAAGTGTGGCATTTGTGGCAAAGACTTTTTGTTGAAAGCGCATTTGCAACGACATGAAACTACGCACACAGGAAACAGACCTTTTCAATGTGGACAATGTGATCGTTCTTATGCTTCGAAAAGATCTTTAAATGTTCATATTATGGACCACACTGGTATTAAACCAGttcattgtaattattgcacgaaaagttttaaaacaccGTATCAGTTAACTGAACATATAAGGACACATACTAATGAGCGTCCTTATAAATGTGAAATTTGtagcaaatattttaaacaaaagcagCATTTGAATATACACATAAAGACGCATACTAATGAAAAACCATATAACTGTGAAGTCTGTTTCAAAACATTCCGTGCAAAGAAAACTTTGATTAATCATTTAAAGGTACATAGCGGGGAGAAACCGTACAAATGTGAATATTGTGAATTTTGCACTAATCGAAAAGATGCTTTAGTGGGGCATATAAGAACGCATACGGGAGAAAAACCACATAAGTGTTTAATATGTGAACGAGCTTTTGCTCAAAGAGGCACCTATAAAATACACATGCGTACACACACTGGGGATAGACCGTATGTATGTGATCAATGCGGACGTCGATTTATTTGTAAAGGCAGTTTGCAGCTTCACATAAAAGCACACAATGGAATAAGAACGTTCAAGTGTAGTATTTGCACGCGTGCTTTTGTATCATCGTCCGGATTAAATGCACACATGCAATCGCATGTTCGAATTAAAACTAAAGATTTTAAATGCGAGTTATGTGGTGCTTTATACTCGGCTCGTAGTACTTTACGTTCCCATCATTATCGAGCACATTTAAACGAAAAACCCTATAAGTGTGATTATTGCGATAGCAGATTCGTTGAGAAAAAAGAAGTTAAACGGCATTTAGTAACGCATACTCGGGAGAAGCCGTACAAATGTGATCTGTGCGAACGGGAATTCTCATTGAAACAAAGCTTAAAAATACACATGCGTCTACACTACAACATTAAACCATATAAGTGTGCTTTATGCTCACAAGCATTTGTCACAAACTCGAGATTGGGGCTACATCTACGTACTAATCATACCAACGACAATGTAAAACCATTCAAGTGCTTACAGTGCCCGTTTCGAGGAGCAAACACTTCTGcaattaaaatgcatttatattCGCATGCAGGAATTAAATTATACAAGTGCCAGGTATGTGCAAAACGCTTCACTCGGGCATACACCTTAAAAATGCACATACAGAGACACACAGTTTTTGAGGAATTCGAGTGTTATCATTGCAAAAAGAAATTCtgcaacaaaatgtttttacgaCAACATTTAAAACTACATCGTGATAGTAAACgttataaatgtgttatatGTTTTAAAGCGTTCGTTACTTCCGCAGTGTTAAACAGACATGTCGGAATGGTACATCACAAGAAACGACCGTTTAAATGTACGGTGTGCAATATTAAGTTATATACAGAGCATCATTTGAAACGTCACAAAGAAAGTAAAACTCACAAAAACCGGTTTTATTTGTCGAGGACAAGTGCAGTAGATTTAAGTTAA
Protein Sequence
MNKTEDVIDTKQEITVNPIESTFHDIKLEEEFKSEWDDDYSIQTSIKTETLNDNIPRKFNCVHCEKGFNWNSQLLQHLKLHSDLRPFECTSCPKSFKDISSLNSHLKIHSGKRPFKCGICGKDFLLKAHLQRHETTHTGNRPFQCGQCDRSYASKRSLNVHIMDHTGIKPVHCNYCTKSFKTPYQLTEHIRTHTNERPYKCEICSKYFKQKQHLNIHIKTHTNEKPYNCEVCFKTFRAKKTLINHLKVHSGEKPYKCEYCEFCTNRKDALVGHIRTHTGEKPHKCLICERAFAQRGTYKIHMRTHTGDRPYVCDQCGRRFICKGSLQLHIKAHNGIRTFKCSICTRAFVSSSGLNAHMQSHVRIKTKDFKCELCGALYSARSTLRSHHYRAHLNEKPYKCDYCDSRFVEKKEVKRHLVTHTREKPYKCDLCEREFSLKQSLKIHMRLHYNIKPYKCALCSQAFVTNSRLGLHLRTNHTNDNVKPFKCLQCPFRGANTSAIKMHLYSHAGIKLYKCQVCAKRFTRAYTLKMHIQRHTVFEEFECYHCKKKFCNKMFLRQHLKLHRDSKRYKCVICFKAFVTSAVLNRHVGMVHHKKRPFKCTVCNIKLYTEHHLKRHKESKTHKNRFYLSRTSAVDLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-