Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069438.1:9191621-9200222[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.011 2.7 11.2 0.3 2 23 31 52 30 52 0.97

2 29 2.3e-05 0.0055 19.7 2.5 1 23 58 81 58 81 0.97

3 29 0.00033 0.08 16.1 4.5 1 23 87 109 87 109 0.97

4 29 0.079 19 8.6 2.2 3 23 117 138 115 138 0.94

5 29 5.1e-05 0.012 18.6 1.0 1 23 143 165 143 165 0.97

6 29 0.0051 1.2 12.3 2.5 1 23 175 197 175 197 0.97

7 29 0.0049 1.2 12.4 0.1 2 23 203 224 202 224 0.96

8 29 0.00042 0.1 15.7 1.5 1 23 230 252 230 252 0.98

9 29 3.1e-07 7.4e-05 25.6 0.6 1 23 258 280 258 280 0.99

10 29 0.0043 1 12.6 2.6 1 23 300 322 300 322 0.98

11 29 6.9e-07 0.00016 24.5 2.3 1 23 328 351 328 351 0.98

12 29 0.022 5.2 10.3 1.4 1 23 361 383 361 383 0.97

13 29 0.0021 0.5 13.5 1.5 2 20 390 408 390 412 0.94

14 29 0.0013 0.3 14.2 0.1 2 23 418 439 417 439 0.97

15 29 0.00045 0.11 15.6 3.2 1 23 449 471 449 471 0.98

16 29 2.9e-05 0.007 19.4 0.2 1 23 476 498 476 498 0.98

17 29 0.00032 0.077 16.1 4.0 1 23 504 526 504 526 0.98

18 29 4.2e-06 0.001 22.0 1.2 1 23 532 554 532 554 0.98

19 29 0.00047 0.11 15.6 0.5 2 23 588 609 587 609 0.96

20 29 0.037 8.9 9.6 1.8 1 23 629 651 629 651 0.97

21 29 0.15 35 7.7 3.4 1 23 655 677 655 677 0.88

22 29 0.001 0.25 14.5 0.6 1 23 683 706 683 706 0.98

23 29 0.0013 0.3 14.2 2.2 1 23 712 734 712 734 0.97

24 29 0.00029 0.069 16.3 0.9 1 23 740 763 740 763 0.97

25 29 0.00014 0.032 17.3 1.7 2 23 775 796 774 796 0.95

26 29 3.9e-06 0.00094 22.1 1.2 3 23 810 830 808 830 0.96

27 29 9.7e-05 0.023 17.7 2.0 1 23 836 858 836 858 0.98

28 29 1.3e-05 0.003 20.5 1.1 1 23 864 886 864 886 0.98

29 29 0.006 1.4 12.1 0.5 1 21 892 912 892 913 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.011	2.7	11.2	0.3	2	23	31	52	30	52	0.97
2	29	2.3e-05	0.0055	19.7	2.5	1	23	58	81	58	81	0.97
3	29	0.00033	0.08	16.1	4.5	1	23	87	109	87	109	0.97
4	29	0.079	19	8.6	2.2	3	23	117	138	115	138	0.94
5	29	5.1e-05	0.012	18.6	1.0	1	23	143	165	143	165	0.97
6	29	0.0051	1.2	12.3	2.5	1	23	175	197	175	197	0.97
7	29	0.0049	1.2	12.4	0.1	2	23	203	224	202	224	0.96
8	29	0.00042	0.1	15.7	1.5	1	23	230	252	230	252	0.98
9	29	3.1e-07	7.4e-05	25.6	0.6	1	23	258	280	258	280	0.99
10	29	0.0043	1	12.6	2.6	1	23	300	322	300	322	0.98
11	29	6.9e-07	0.00016	24.5	2.3	1	23	328	351	328	351	0.98
12	29	0.022	5.2	10.3	1.4	1	23	361	383	361	383	0.97
13	29	0.0021	0.5	13.5	1.5	2	20	390	408	390	412	0.94
14	29	0.0013	0.3	14.2	0.1	2	23	418	439	417	439	0.97
15	29	0.00045	0.11	15.6	3.2	1	23	449	471	449	471	0.98
16	29	2.9e-05	0.007	19.4	0.2	1	23	476	498	476	498	0.98
17	29	0.00032	0.077	16.1	4.0	1	23	504	526	504	526	0.98
18	29	4.2e-06	0.001	22.0	1.2	1	23	532	554	532	554	0.98
19	29	0.00047	0.11	15.6	0.5	2	23	588	609	587	609	0.96
20	29	0.037	8.9	9.6	1.8	1	23	629	651	629	651	0.97
21	29	0.15	35	7.7	3.4	1	23	655	677	655	677	0.88
22	29	0.001	0.25	14.5	0.6	1	23	683	706	683	706	0.98
23	29	0.0013	0.3	14.2	2.2	1	23	712	734	712	734	0.97
24	29	0.00029	0.069	16.3	0.9	1	23	740	763	740	763	0.97
25	29	0.00014	0.032	17.3	1.7	2	23	775	796	774	796	0.95
26	29	3.9e-06	0.00094	22.1	1.2	3	23	810	830	808	830	0.96
27	29	9.7e-05	0.023	17.7	2.0	1	23	836	858	836	858	0.98
28	29	1.3e-05	0.003	20.5	1.1	1	23	864	886	864	886	0.98
29	29	0.006	1.4	12.1	0.5	1	21	892	912	892	913	0.94

Sequence Information

Coding Sequence: atgaatGTGCCTCTACGCAGAAGTCAATTTTGTATCCGCGCTTGGATTAACGATGGAAAATTAACGAACATTcagttgaaatttttaaatcaatgcgAAGTGTGCTTAGAAATCTTTCCTAATAAAAGTCGGTTACTGAACCACCAAGTCCGTCATACCCAAGAAAGACCTTACCAGTGTGATATATGTTTGCAACGGTTCAAACAAAGGAGCCATCTTTATAATCACATACGAGAAATTCATCAAAGTCGAAAATACTACCATTGCGatatgtgtaataaaaaatttgtgtcgaaaaataatttgaaactacacAAAGATCGCCATGTAGACAATTACAGAACTCACTGCGCTGTATGTAATAAAGGATTTTATTCAAAGCACGCCGCGAGGAATCACGTTTTGAAGGTACACGAAAAGGTGTTGCACGAATGTGAAGTTTGTCGAAAACCTTTTATGTCGAAGGAGTCTTTAAAAGTACACATGGAATCGCACAACGCCAATTATATGTCGACTAAAAGATTTCAGTGTGCTTTGTgcgaaaaaacttttaaatggaAACAATCTCTAAAGACTCATCTTAAATTTCACAGGGGCCAGAAATTAGTTTGTGACATTTGTGGAAAATCTCTGTTGTCTAGAAATGGATTGAAAGAACACATGTTACGACACAACGAAGAGAAACCTCACAAATGCGAATTTTGCGAGATGAGTTTCACTGGTAAGACTGGTTTGGTTAGACATCTCCGAGGTCATACCGGCGTGAAACCGTACCAATGTGCAGTTTGTCAGAAATCGTTTACTCAGAGACCTAATTTAGTGATTCATATGAGGCGCCATACTGGGGAAAAGCCGGCCAACTGCTATAAATCCGAGACAAGTCCATTGGGATTTTTACATCAATGCGACATTTGCTTAAGAATTTTTTCTGAACGAAGATACCTGAGAAGTCATAAAATTACTCATAATCAGGAACAGCCTTATCAATGTAATTTATGTCCGAAACGGTTTAAACGCAAGTATAATTTAACTGGGCACATAAAGAAACTGCACCTAAACATAAACTACGATAACAAAAAACACCAATGCAGAGTATGTAACAGAATTCTGGCGTCGGAAACGAGTTTGAAGATGCACCAAGATCGCCATACAAACACATATGGAGCTTATTGCTCCGTATGCAACAAAggattttgtacaaaatatgaTGTTACGCGGCATATATGGAACGTGCACGAAAAAGTCATGCTTAAATGCCCAATTTGTGAAAAACTACTTTCGGCAGAAGAATCTTTAAGGCGTCACATGGAAACCCACAGTGAGAATTACTTATCTATTAACAACTTTAAGTGCCATCTGTGCGAGAAAAGTTTTAAGTGGAAACGATCATTGACTATTCATATTGATACGCACGCTACTAATAAGTTCGTATGCAACATTTGTGGAAAATCTTTGTCATCTAAACGGGGTTTGTCTGAACACATACAACTACACAAcaaagtgaaaaaccacaaatgCGAATTTTGCAATATGCGTTTTACAAAAACGAGTAAATTGGCCGTACACCTTCGAACTCACACTGGCGTAAAACCGTACGAATGCGgatattgcaaaaaaagttttggccAAAAGTCTTATTTGGTGATTCATTTGAGGTACCACACCGGAGATAGGCCTTATAAATGCGATCTAACGGTCAAAACAGAATCGTTATCGAAAAATTGTGTACCAAAACGTgcgcaaaaagaaaaacgtatttgGTCGTGCAACAAGTGTAACGAAGTATTTGTAACGTTGCGACTATTGCGCGATCATCGAAAAGCTCATCGCAAAGAAAACGACGAAACGCAGTACAATTATAACTACGACGAAGACAAAGATCTTTTTGTCTGTTTTACGTGCGATCAAGAGTGTAAGACCAAAGAGGAAATAGAGACTCACGTTTTGAAACACGAAGAGAAATTTGTGTGCAATATTTGCGACGAGACGTTTGTAAAACCGCACGAGTACTCATGTCATTTATTCAACCATGACCAATCTAAAGGCTTTCAGTGTCCGTTTTGCGATTACTCCACAAATAGGCGAACCGCGATTATGATACACATCAACACGTACCATCTACGAAAATACATTTACACTTGCTCGCAGTGTGGGAAAGGCTTTAACGACTGCGTCATGTTCAAAGAACATAATAATATACATGAAGGTAAAAAACCATTTCGCTGCGTCGTGTGCGAGAAGGATTTTGCATTTTCAAGTTACTTGAATTCGCACCAACTTCGCAACCATAAAGTTACCATCGACGGAATGATCGGTTCAAACCAGTGTTGTATTTGTTCAAAAACGTTTGCCAGAAAAAACGCGTTGGAAAACCACATGGTGTTGCACAGTTTGAACCAGAAGAGAGTGCacgaaaagaaacatttatgcGACATATGCGGGAAGGGTTTTTCCCGGAACGAAAAATTGAGGATACACTATCGGGTACACACTGGCGTGAAGCCGTACTCTTGTTCGTACTGCAGCAAAAGCTTCACCAAAAGAGACTACATGATAATGCACGAGCGCGTGCATAGTGGGGAAAAACCTTATTCGTGCGAATACTGCGGCAAGTGTTTCAACCAAGGCGCACCCTTGCGTCTACACATTCGAAGTCATACTGGCGAAAGACCATATCGTTGCCACATATGCAACACTGGTTTCATTTCCAGAGGCGTTCTTAATCTACACTTTAGGAATTGTCCCGGCAGTTCGAATTAG
Protein Sequence: MNVPLRRSQFCIRAWINDGKLTNIQLKFLNQCEVCLEIFPNKSRLLNHQVRHTQERPYQCDICLQRFKQRSHLYNHIREIHQSRKYYHCDMCNKKFVSKNNLKLHKDRHVDNYRTHCAVCNKGFYSKHAARNHVLKVHEKVLHECEVCRKPFMSKESLKVHMESHNANYMSTKRFQCALCEKTFKWKQSLKTHLKFHRGQKLVCDICGKSLLSRNGLKEHMLRHNEEKPHKCEFCEMSFTGKTGLVRHLRGHTGVKPYQCAVCQKSFTQRPNLVIHMRRHTGEKPANCYKSETSPLGFLHQCDICLRIFSERRYLRSHKITHNQEQPYQCNLCPKRFKRKYNLTGHIKKLHLNINYDNKKHQCRVCNRILASETSLKMHQDRHTNTYGAYCSVCNKGFCTKYDVTRHIWNVHEKVMLKCPICEKLLSAEESLRRHMETHSENYLSINNFKCHLCEKSFKWKRSLTIHIDTHATNKFVCNICGKSLSSKRGLSEHIQLHNKVKNHKCEFCNMRFTKTSKLAVHLRTHTGVKPYECGYCKKSFGQKSYLVIHLRYHTGDRPYKCDLTVKTESLSKNCVPKRAQKEKRIWSCNKCNEVFVTLRLLRDHRKAHRKENDETQYNYNYDEDKDLFVCFTCDQECKTKEEIETHVLKHEEKFVCNICDETFVKPHEYSCHLFNHDQSKGFQCPFCDYSTNRRTAIMIHINTYHLRKYIYTCSQCGKGFNDCVMFKEHNNIHEGKKPFRCVVCEKDFAFSSYLNSHQLRNHKVTIDGMIGSNQCCICSKTFARKNALENHMVLHSLNQKRVHEKKHLCDICGKGFSRNEKLRIHYRVHTGVKPYSCSYCSKSFTKRDYMIMHERVHSGEKPYSCEYCGKCFNQGAPLRLHIRSHTGERPYRCHICNTGFISRGVLNLHFRNCPGSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -