Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069438.1:14578562-14581334[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0013 0.31 14.2 1.0 1 23 151 173 151 173 0.97

2 27 0.0049 1.2 12.4 1.3 1 23 179 201 179 201 0.97

3 27 0.00035 0.083 16.0 1.7 1 23 207 229 207 229 0.97

4 27 1.6e-05 0.0038 20.2 0.4 1 23 235 257 235 257 0.98

5 27 0.0036 0.86 12.8 0.5 1 23 263 285 263 285 0.98

6 27 0.0005 0.12 15.5 0.2 1 23 291 313 291 313 0.98

7 27 0.061 14 8.9 0.2 1 23 319 341 319 341 0.97

8 27 2.8e-05 0.0066 19.5 0.5 1 23 347 369 347 369 0.97

9 27 3.1e-05 0.0074 19.3 0.5 1 23 375 397 375 397 0.96

10 27 7.4e-07 0.00018 24.4 1.7 1 23 403 425 403 425 0.98

11 27 4e-07 9.6e-05 25.2 0.3 2 23 432 453 431 453 0.97

12 27 3e-08 7.1e-06 28.8 0.3 1 23 459 481 459 481 0.98

13 27 0.00062 0.15 15.2 0.9 2 23 488 509 487 509 0.91

14 27 1.2e-05 0.0029 20.6 0.7 1 23 515 537 515 537 0.98

15 27 2.9e-05 0.007 19.4 1.5 1 23 543 565 543 565 0.98

16 27 6.6e-06 0.0016 21.4 0.4 2 23 572 593 571 593 0.97

17 27 0.00016 0.039 17.0 0.1 2 23 600 621 599 621 0.91

18 27 2.7e-05 0.0066 19.5 0.2 1 23 627 649 627 649 0.93

19 27 3.5e-05 0.0084 19.1 3.0 1 23 655 677 655 677 0.98

20 27 0.0025 0.6 13.3 0.1 2 23 684 705 683 705 0.96

21 27 0.00043 0.1 15.7 0.8 2 23 716 737 715 737 0.91

22 27 1.1e-06 0.00027 23.8 1.1 1 23 743 765 743 765 0.98

23 27 5e-05 0.012 18.7 2.9 1 23 771 793 771 793 0.98

24 27 9e-06 0.0022 21.0 0.9 2 23 800 821 799 821 0.97

25 27 1.6e-05 0.0039 20.2 0.4 1 23 827 849 827 849 0.98

26 27 0.0013 0.32 14.2 0.3 1 23 855 877 855 877 0.98

27 27 1.3e-05 0.0031 20.5 0.8 2 23 884 905 883 905 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0013	0.31	14.2	1.0	1	23	151	173	151	173	0.97
2	27	0.0049	1.2	12.4	1.3	1	23	179	201	179	201	0.97
3	27	0.00035	0.083	16.0	1.7	1	23	207	229	207	229	0.97
4	27	1.6e-05	0.0038	20.2	0.4	1	23	235	257	235	257	0.98
5	27	0.0036	0.86	12.8	0.5	1	23	263	285	263	285	0.98
6	27	0.0005	0.12	15.5	0.2	1	23	291	313	291	313	0.98
7	27	0.061	14	8.9	0.2	1	23	319	341	319	341	0.97
8	27	2.8e-05	0.0066	19.5	0.5	1	23	347	369	347	369	0.97
9	27	3.1e-05	0.0074	19.3	0.5	1	23	375	397	375	397	0.96
10	27	7.4e-07	0.00018	24.4	1.7	1	23	403	425	403	425	0.98
11	27	4e-07	9.6e-05	25.2	0.3	2	23	432	453	431	453	0.97
12	27	3e-08	7.1e-06	28.8	0.3	1	23	459	481	459	481	0.98
13	27	0.00062	0.15	15.2	0.9	2	23	488	509	487	509	0.91
14	27	1.2e-05	0.0029	20.6	0.7	1	23	515	537	515	537	0.98
15	27	2.9e-05	0.007	19.4	1.5	1	23	543	565	543	565	0.98
16	27	6.6e-06	0.0016	21.4	0.4	2	23	572	593	571	593	0.97
17	27	0.00016	0.039	17.0	0.1	2	23	600	621	599	621	0.91
18	27	2.7e-05	0.0066	19.5	0.2	1	23	627	649	627	649	0.93
19	27	3.5e-05	0.0084	19.1	3.0	1	23	655	677	655	677	0.98
20	27	0.0025	0.6	13.3	0.1	2	23	684	705	683	705	0.96
21	27	0.00043	0.1	15.7	0.8	2	23	716	737	715	737	0.91
22	27	1.1e-06	0.00027	23.8	1.1	1	23	743	765	743	765	0.98
23	27	5e-05	0.012	18.7	2.9	1	23	771	793	771	793	0.98
24	27	9e-06	0.0022	21.0	0.9	2	23	800	821	799	821	0.97
25	27	1.6e-05	0.0039	20.2	0.4	1	23	827	849	827	849	0.98
26	27	0.0013	0.32	14.2	0.3	1	23	855	877	855	877	0.98
27	27	1.3e-05	0.0031	20.5	0.8	2	23	884	905	883	905	0.96

Sequence Information

Coding Sequence: ATGGGTGAAAATACAACAAGTAGTTGTCGAATTTGTCTGCAAGAAATAGTAAAAACCGAGCAATACTATTTTCTTAACAGCGACAATGAGTTAAAGCTACAAACCAAGTTGGTAGACATTCTGCCACAAATAGATTTAAACGTCATACCCAACCCAATTACTTGTAAGCAATGTATGATCACAATCGAGGAAATATACCAATTCAAGCAAATATGCATGCAAACCGAAACCACTATAAGGAACTTAAGATTAACAAAAGCTTTTCATGATGATTCAActtatgttaaaaaagaaacaatcaaACAAGAATTAGTTGATGATAACATTAAAATCGAATTTTCagatttgcaatttattaaagatGACTGTTTGGAAATGAATCCAAATGTACCTGTAGGCATCAAGGAACCTTCAACAACAGAATTGTATCATGCCGTGGTTCGTCAAAATTTTGAGTGTGATTTGTGTAATTATTCGACCGACACAAGGAGGTCGTTATATAATCACATGTTGTTACACACAGCCAAAAACGTGTACAACTGTGATCAATGTGATTTTCAAAGTGTGCATAAAGGTAGTTTAAAGACTCACATGGTTGTTCATAGCTTGGTGAAACCATTTGTTTGTGAATCTTGTGGATACTCTACTCGATATCACTCGAATTTAAAGATACACCTGACAATTCACAGTTCGTTAAAACCGTTTGTATGTGACACATGTGGGTTCTCTGCTCGACGTCGGGGTGAGTTAAAAAGGCACATGATTACTCACAATTCAGTGAAATCGTTCATTTGTCAAACTTGTGGGTTCTCTACTAAACTTGAAGACACTCTAAGACTGCACATATTGACTCACAGCTCCGAAAAACCGTTCAtttgtgaaacttgtgggttTGCTACTAAACTTAAAGACTCTCTAGAACAACACATGGCGACTCACAGCTTGATAAAACCATTCATTTGTGAAATTTGTGGGTTCTCTGCTAGATTTGAAGGTATTTTAAAGCGGCACATGACGTCTCACAGCTCAGTAAAACCGTTTATTTGTGACACTTGTGGGTTCTCCGCTCGACGTCGGGAGAATTTAAAGAACCATATGATGATTCACAGCTTAGTAAAGCCATTTGCTTGTGAAACTTGTGGATACTCGACTCGGTACCGGgcgaatttaaaaaagcacATGGTAATTCACAGCTCAGTGAACTCGTTCATTTGTGAAACATGTGGGTACTCTACTACTAGTCGGtctaatttaaaacaacacaTGAAGACTCACAATTCGCTAAAGTGTTTAGTCTGTGAAACTTGTGGGTACTCTACGGCTACTCcgtctaatttaaaaaatcacatgAGGACACACAGTTCGGTCAAACCATTCATCTGTGAAATTTGTGGGTACTCTACTGCTACTCCGTCTAATTTAAAGCGACACATGAGGACTCATGATTCGGCAAAACCATTAgtttgtgaaacttgtgggtACTCGACTGGAAATTCGTCTCATTTAAAGCAACACATGTGGACTCACAGTCCGGTAAAACCGTTCGTCTGTGATATTTGTAGATATTCTACTGCTAatccatttaatttaaaatcacacaTGAAAACTCACAGTTTGGTAAAACCATTCGTCTGTGCAACTTGTGGGCACTCTACTGTTACTTTAGCTAAATTAAAGCGACACATGAGGACTCACGATTCGGCGAAACCGTTAGTCTGTGAAACTTGTGGGTACTCGACTGGTAGATCGTCTAATTTAAAGCAACACATGTTGACTCACAGTTTTGTAAAACCGCTCGTCTGTGAAATTTGTGGATACTCGACTGCTAATCCGTCTACTTTGAAACAACACATGTGGACTCACAGTCTCGTCAAACCGTTCGTCTGCGAAACTTGTGGGTACTCGACGGCTAATCCGtctaatttaaaacaacatatgTGGACTCACAGTTTAGTAAAACCGTTCACCTGTGAAACTTGTGGGTACTCCACTGCTAATTCATCTCATTTTAAGGAACACATGACGACTCACAGTTCGGTAAAACCGTTAGTCTGTGAAACTTGTGGGTACTCTCCTGGTAGACCGTCTCTTTTAAAGCAACACATGAAGATTCACAATTTGGAAAAACCCAAGATGAAACCGTTAGTCTGTGGAACTTGCGGTTACTCTACTGTTAACAAGGGTCATTTAAAGAAACACATGTGGACTCATAGTTTGCAAAAACCGTTCGTTTGTGAAACATGTGGTTATTCTACTCGATATCAGGATGATTTAAAGAAACACATTCGGACTCACAGCTTGGTAAAACCGTTCgtttgtgaaacttgtgggtACTCGACTTCTAAATCGACTCATCTAAAGCAACACATGATGAATCACAGTCTAGCAAAACAATTAGTCTGTGAAACTTGCGGGTACTCTACTGTTAATTCGTCTCATTTAAAAGAACACATGTTGACTCACAGTTcggtaaaaccgtttgtttgtgaaacttgtggTTTTTCTACTCGACGTGCGAGAGATTTACAGAAACACATGATTATTCACAGCAcggtaaaaccgtttgtttgtgGAACTTGTGAATTCTCTACTGGACGGCGGGGGGATTTAAAAAGACACTTGATGATTCACATCTCGGTAAAACCGTTGGTGTGTGAAACTTGTGGATTCTCTACTAAACGCCAGAAGGATTTACAGAAACACATGAATATTCATAGTTTGTAG
Protein Sequence: MGENTTSSCRICLQEIVKTEQYYFLNSDNELKLQTKLVDILPQIDLNVIPNPITCKQCMITIEEIYQFKQICMQTETTIRNLRLTKAFHDDSTYVKKETIKQELVDDNIKIEFSDLQFIKDDCLEMNPNVPVGIKEPSTTELYHAVVRQNFECDLCNYSTDTRRSLYNHMLLHTAKNVYNCDQCDFQSVHKGSLKTHMVVHSLVKPFVCESCGYSTRYHSNLKIHLTIHSSLKPFVCDTCGFSARRRGELKRHMITHNSVKSFICQTCGFSTKLEDTLRLHILTHSSEKPFICETCGFATKLKDSLEQHMATHSLIKPFICEICGFSARFEGILKRHMTSHSSVKPFICDTCGFSARRRENLKNHMMIHSLVKPFACETCGYSTRYRANLKKHMVIHSSVNSFICETCGYSTTSRSNLKQHMKTHNSLKCLVCETCGYSTATPSNLKNHMRTHSSVKPFICEICGYSTATPSNLKRHMRTHDSAKPLVCETCGYSTGNSSHLKQHMWTHSPVKPFVCDICRYSTANPFNLKSHMKTHSLVKPFVCATCGHSTVTLAKLKRHMRTHDSAKPLVCETCGYSTGRSSNLKQHMLTHSFVKPLVCEICGYSTANPSTLKQHMWTHSLVKPFVCETCGYSTANPSNLKQHMWTHSLVKPFTCETCGYSTANSSHFKEHMTTHSSVKPLVCETCGYSPGRPSLLKQHMKIHNLEKPKMKPLVCGTCGYSTVNKGHLKKHMWTHSLQKPFVCETCGYSTRYQDDLKKHIRTHSLVKPFVCETCGYSTSKSTHLKQHMMNHSLAKQLVCETCGYSTVNSSHLKEHMLTHSSVKPFVCETCGFSTRRARDLQKHMIIHSTVKPFVCGTCEFSTGRRGDLKRHLMIHISVKPLVCETCGFSTKRQKDLQKHMNIHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -