Alei050957.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- -
- Assembly
- GCA_035610365.1
- Location
- CM069433.1:187440404-187441760[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9e-07 9.8e-05 24.6 0.1 2 39 16 53 15 58 0.88
Sequence Information
- Coding Sequence
- atgCCACGAAAACGTGTTTTAAAGACCAATAGAGTGCTTATTGATGAGGCGAATATGAAACAGGCGATTATTAAGGTCTTTAATGGTACATATTCAGAACGACGAGCAGCAATAATTTATGAAATACGTAGAACTACTTTACAATGTAGGATAAAACGAATTTTGAACAAGTACACCAAAGAAAGTTATTTAACACACAATGGAGAAAGAGCAGACGATTCGGGAAATGATAGTATCGATGAAGATTCTCCAAAGTACTCTAGTAAGTACACAGTCAGGCAAGTTTTTACAAATGACCAGGAGTTAGAATTAGTGAAATATATCAAAAGATGCTCTGATATAAACTATGGCCTTACTTTTACTGATGTCCAAAAGCTAGCATATGAATATGCCAATATTTTACCGCACTGTAAAATACCGGCGGAATGGCATGCTACAAAATCAGCAGAAGATGGGTGGAAGAGGGGATTTATGTATGAGACCGGCGTGACAACTGTCATCAAACCAGTAAAAGTAGTTACAACATGTGGGAAAAAGCAAGTTGCACAAGTTACTTCTGCTGAGAGAGGCGAATTAGTAACGTTTGTAGGCATCATAAATGCTGCCGGGCAATCATTGCCCCCTGTGTACGTCTTTCCCAGACGCAGGAATTTAGATGATTTTATGTTAGGTGCTCCTGTTTCAAGTTTAGCATTAGGCAGTAAGTCTGGATGGATGACAGCTGAAATATTTCCGTCTGTTCTAAAAAATATAGTGACACAAACAAATTGTAGTGTGGATAACCCGATTCTGATTTTGCTTGATAATCACGAATCCCACGTATCCTTCAATTGTGTTAAATATTGCAAAGAAAATGGAATATGTCTCCTAAGTTTTCCCCCTCACACCACCCACCGGTTTCAGCCACTCGATATTGGAATTTATAGGCCATTCAAATCCTACTGTAGCGTTGCAGTCAATGACTGGCTGACTTCAAACCCTGGCAAACCtatttcaatcaaaaatataccTAATTTGACTAATGTTCCCTACTTAACAGCTTTTTGTGCAAGAAATATAGTTACCAGTTTTCAAAAACCTGGCATTTGGCCACTAAATCATTTGGCATTTTCCGATGATGACTTTGCTTCAAGTTATGTCACCGATAGACCTCTCCCAAATAATGATACAAGTGCTACAGGAGGAAGTTCAGACGGAGAGTAA
- Protein Sequence
- MPRKRVLKTNRVLIDEANMKQAIIKVFNGTYSERRAAIIYEIRRTTLQCRIKRILNKYTKESYLTHNGERADDSGNDSIDEDSPKYSSKYTVRQVFTNDQELELVKYIKRCSDINYGLTFTDVQKLAYEYANILPHCKIPAEWHATKSAEDGWKRGFMYETGVTTVIKPVKVVTTCGKKQVAQVTSAERGELVTFVGIINAAGQSLPPVYVFPRRRNLDDFMLGAPVSSLALGSKSGWMTAEIFPSVLKNIVTQTNCSVDNPILILLDNHESHVSFNCVKYCKENGICLLSFPPHTTHRFQPLDIGIYRPFKSYCSVAVNDWLTSNPGKPISIKNIPNLTNVPYLTAFCARNIVTSFQKPGIWPLNHLAFSDDDFASSYVTDRPLPNNDTSATGGSSDGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00153008;
- 90% Identity
- -
- 80% Identity
- -