Alei031999.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- -
- Assembly
- GCA_035610365.1
- Location
- CM069433.1:5523122-5525006[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-07 7e-05 25.1 0.0 2 41 30 70 29 73 0.93 2 2 3.3 3.6e+02 3.6 0.0 22 31 93 102 92 113 0.85
Sequence Information
- Coding Sequence
- ATGGGTGAAAATTACCACATTTTACACAGCGGTAAGGAGCAGTACATTTCGATTGCGAATGCCCATGTAGTTGACAGCGGAAGCATTGAAGAGCAACTTGAAAAAGCTGTCGCAGATATTAGACGCAATCGCTTATTGTATGCAGCAGCTTCCAGAAAACATAACATCCCTAAGAAGACCCTCTGGAACAAAGTGAACAATAAACATACAAACAAACATGGAAGCCAAACAACTTTGTCGGAAGTTCAGGAACATCATTTAGTTGATGTTGTTCTAGCAGCATCTGAGTTTGGCATTCCGTTAACAGCAATGGACTTTCGATTGCTAACAAAGAGATATTTGGATGCATCGGGGAAAACAGTTCTGAAATTTACTGCCAATTTGCCTGGTAAAGAGTGGAAGCTTGGAAGGTGTGCCAAATGCGAACCAAACCTTTCTGATGATCCGCGATCAACCAAGTGTATCTTCAGGCGTGGAATAAAATACCAAGAACGAGTAATGAATACAAATGAGACTTCAATTTCGATAATGTTTGCCATTTCCTGGTGGTATGGAAGTCCTTCCACCATATGTGGTGTATAA
- Protein Sequence
- MGENYHILHSGKEQYISIANAHVVDSGSIEEQLEKAVADIRRNRLLYAAASRKHNIPKKTLWNKVNNKHTNKHGSQTTLSEVQEHHLVDVVLAASEFGIPLTAMDFRLLTKRYLDASGKTVLKFTANLPGKEWKLGRCAKCEPNLSDDPRSTKCIFRRGIKYQERVMNTNETSISIMFAISWWYGSPSTICGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -