Alei063289.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- -
- Assembly
- GCA_035610365.1
- Location
- CM069434.1:113332497-113334456[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-09 3.8e-07 32.4 0.0 3 38 17 52 16 56 0.95
Sequence Information
- Coding Sequence
- ATGCCGCGGAATTATAGTCGAAAAACGGATCGCCAAAAATGGccgaaagaaaatttacaacGAGCAATGGAATGTGCCCAAAATGGTGAATATAGTGTAAACGCAGCAGCAAAAAGATATGGAATTCCTGAGTCAACCTTACGGCGCTACTTGCAGAAATACGTAGATGggaattttcctaTAAATGCTGGACGGTATAAAAACACTTTCAGCAATGAGCAACTACTTGAACTTAAAAATTATGCTATTGACATTGATAAGAGAGCATTTGGGTTAACAAAGGAGCAGTTAGGAAAACTGGCGTATAGGTTCGCTGAAGGACATAATATTGCACATAGATTTAATCGAGAAAAAAAGACAGCTGGTAGAGAATGGATAGAACAATTTATGAAGTATTGCAACTTTTCATTACGTAAACCTGAAGCTACATCAATTGCCAGATTAACAGGATTTAACAAACAGAATgttcaatcatttttttctcaattagAAGAACTTatggtaaaatataaatattcacctaatcaaatttataatattgatgAAACGGGCTTTAGTACTGTGCCAACAAAGCAACCGAAGGTTGTTACACCAAAGGGAAATCGTAGGGTAATAAAACTGTCGTCAGGAGAAAGGGGCTTGAATGTCACAATGGTTGGTGGGATGAATGCAGTTGGAAGTTACATTCCACCTTTCTTTATATTCCCTAGAAAAAGGATGCAACCAAGTTACATGCATGGAGCCCCACCTGGATCAGATGGAATAGCTCACGACAGCGGATGGATGACGACCGATAACTTTCTGGTTTATTTAAAGCATCTGGCAAAACATACAATGCCAAGTGCAGATAAtccaatattattattaatggaTAATCACGCATCTCATGTAAATTTAACAGCGATAATTTTTTGTCGtgaaaattatattcaaatgttAGGGTTTCCCGCCCATACAACGCACCGGTTACAACCGTTAGATGTAAGTTTCTACGGACCTTTAAAAACCGCTTACAGCAGATGTTGTGATAACTTTATGACATCACATCCCGGTGAAAACATAGTGTTAACTAACATAGCTGGACTAGTTAATGAAGCATTTCAAAAAGTTGCTAGTGTAGGTATTGCCATTAACGGATTCAAAGCAACGGGAATATATCCCTTTAACGCAGAAATTTTTACCGATGAAGATTTTGCACCATCCAAAACAACTGATAGAGATGAACACGGACCACCACTAACACCAACAACTTTGTCAATTCCTACTCCATCTGTTACAACTATAACATCAAATCAATGCTCATCTAATCTTTCAACAGTTCCTGATGTCATGAGGACACCACTAAGATCAATCTCAAATGTTTCTCCCGGTCCATCAACATCCCAAAGCGTTCAGCCCCCATTATCAGTTGCTTCTCCTAGCCCATCTACATCTCAATGTGTTCTTCCTCCCTTACCAATTGCTAAGAAAAGAGCTGTGAGGCAGAGAACAAAAGTACCATCTTTACTCATTTCTAGCACACCAGTGAaactatattttgaaaataaggaAAATGAGAAACGTGAGGCCGTAGAGAAAGCACAGAGGAGATTACaaaggaaagaagaaaaagaaaaattagaaaacaagaagaaaaaagctACAAATAGTCGTAAAAAAAGAGTAGAATCTTCTGAATCAGAGGACTCCAATGATGAGGTGGACGTTATATATGCTGAAACATCAAATGATGACATGGATTTTGGTGAGGAGGATAAAAATGTATGTGCCATATGTGGAGAAATTGGAAAAACTGAGGTATGGTACCAATGTCAGCAGTGTGAACAATGGGTGCATGCTGAGTGCAGTGGTTGGGACGTATCATTGATAAAAAGAAGACCCTATAAGTgcgatttttgtatttaa
- Protein Sequence
- MPRNYSRKTDRQKWPKENLQRAMECAQNGEYSVNAAAKRYGIPESTLRRYLQKYVDGNFPINAGRYKNTFSNEQLLELKNYAIDIDKRAFGLTKEQLGKLAYRFAEGHNIAHRFNREKKTAGREWIEQFMKYCNFSLRKPEATSIARLTGFNKQNVQSFFSQLEELMVKYKYSPNQIYNIDETGFSTVPTKQPKVVTPKGNRRVIKLSSGERGLNVTMVGGMNAVGSYIPPFFIFPRKRMQPSYMHGAPPGSDGIAHDSGWMTTDNFLVYLKHLAKHTMPSADNPILLLMDNHASHVNLTAIIFCRENYIQMLGFPAHTTHRLQPLDVSFYGPLKTAYSRCCDNFMTSHPGENIVLTNIAGLVNEAFQKVASVGIAINGFKATGIYPFNAEIFTDEDFAPSKTTDRDEHGPPLTPTTLSIPTPSVTTITSNQCSSNLSTVPDVMRTPLRSISNVSPGPSTSQSVQPPLSVASPSPSTSQCVLPPLPIAKKRAVRQRTKVPSLLISSTPVKLYFENKENEKREAVEKAQRRLQRKEEKEKLENKKKKATNSRKKRVESSESEDSNDEVDVIYAETSNDDMDFGEEDKNVCAICGEIGKTEVWYQCQQCEQWVHAECSGWDVSLIKRRPYKCDFCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00152558; iTF_00152590; iTF_00152580; iTF_00152581; iTF_00152585; iTF_00152234; iTF_00152567;
- 90% Identity
- iTF_00152234;
- 80% Identity
- -