Alei078438.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- clz9
- Assembly
- GCA_035610365.1
- Location
- CM069436.1:14339761-14343123[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-09 2.6e-07 32.9 0.0 1 35 18 53 18 60 0.92
Sequence Information
- Coding Sequence
- ATGCctagaaattataaaagagctcTTGGCACACGGCCCTACAGAAATTACACTGAAGAAAATTTACAAGAGGCTTTACTAGCAATAAAGAACAAGACACTGTCGATCCAAAATGCAGCCTCCAAgtataaaataccaaaaaatacacTACATCTAAAATCCCAGGAAAAACATACCAAACCCGTAGGTCGGGCTACAGTCTTTTCGGCACAAGAAGAGGAGCAGTTTGTGGTGCACATTGTTGCCGTATCAAACTATGGATTTCCAGTGAACATCTTTGATTTACGTTGTGTTAACTTACCGGGAAACGATTGGGCAGACTCCTTCATGAAGCGACACAAAGCTATATTGACACAAAGAACcgctaaaaatatttcttactcTAGAGCAACCACTGACGAACAAGTTGTAAATCAGTTTTTTGACAACTTAGAGAGAGAACTCGAAAGAATTCCAAAGGAAAATATTTGGAATTACGACGAAACAAACCTCGTTGATGAGCCTGGTGCTGCAAAAATAATCACCAAAAGAGGAACTAAATATCCTGAGAGAATACAAAACTCATCGAAAGCTTGTACATCTATTATGGTATGTGGCAATGCTGCCGAAACAGTAGCTCCACCTTATGTGAACTATAAAGCAGAAAAAATATGGTCTACGTGGACTGAGAATGCCCCCCCTGACACTCGGTATAACCGAACAAAATCTGGCTGGTTTGATAGCAACTCTTTTGAGGATTGGTTTGTTTCATTAATGCTACCAATCCTCAAGAAGCAAGAAGAGCCAAAGGCTATGATTGACGACAACCTCAGTTCACATATAAATATAGAGGTCATCAAACAATGTGAGAAGAATAACATAAAGTTCATTGTGTTGCCACCAAATGCGACCCATCTTTTACAACCATTAGATGTTGCATTCTTTCGTCCAATGAAGGTGGCTTGGCGAAAGATATTAAAGGACTGGAAGGAGACAGCAGCAGGGAGTCGTTGTACGTCAGTACCAAAAGACCAATTCCTCACTCTATTGAAATCTCTATGGAATGCTATCATTAAAGGCCCAGACAATCTTATTGCCGGCTTTCGCAAGTCAGAGATTTTTCTCACAGACATGCAGCCTGTTTTGAAGAGGTTACCATCAGGAAGCTTGGACACCTCCATTTCTTCTCTGATTGGTGAAAGCTTTCTAGAACAAATTTCGAAGAAGCGTCAGGAggctacccaAGTGCAGaggaagaaaaaactaaatgtcCCTCCTGGAAAAAGTATCTCTTCAGAAGAATTTAAAGCAGCCTTGCCAACAGAACAGTTGCTCATCGATGATGACCAAGACCAACCATCCACTTCAACTGGAGTGAAAGCTCGACAGTGTAGCAAAACAGGACGACCAGATTTAAAAACACTCCAAAGAAAAGGGAAAAGGAGAGACACTGATAGCAGTAGCGAGGAAGAAAATGACAGGTTTTCTCTTCAAGATTCAGAAGACTTGGAAACATTTAGTGATTTGGAAAATCCATTAACCCCATCCATTCCAGATGTACAAACATCAGATTTTCTTCAACATCTAAAAGTGGATGACTTTGTTCTTGTGAGATATGAATGTGAATTATATCCTGGACGAATTGTTCATCTCGAAGATGACGGCGAAaaaattgATGAACCGGAACAAATTGGTCGGCGAGAAATTTTCAAAGTTAAAGAGCTTCAAGTGTACAGTGATCTCTTGGCTTCAgctgacaaaaactaa
- Protein Sequence
- MPRNYKRALGTRPYRNYTEENLQEALLAIKNKTLSIQNAASKYKIPKNTLHLKSQEKHTKPVGRATVFSAQEEEQFVVHIVAVSNYGFPVNIFDLRCVNLPGNDWADSFMKRHKAILTQRTAKNISYSRATTDEQVVNQFFDNLERELERIPKENIWNYDETNLVDEPGAAKIITKRGTKYPERIQNSSKACTSIMVCGNAAETVAPPYVNYKAEKIWSTWTENAPPDTRYNRTKSGWFDSNSFEDWFVSLMLPILKKQEEPKAMIDDNLSSHINIEVIKQCEKNNIKFIVLPPNATHLLQPLDVAFFRPMKVAWRKILKDWKETAAGSRCTSVPKDQFLTLLKSLWNAIIKGPDNLIAGFRKSEIFLTDMQPVLKRLPSGSLDTSISSLIGESFLEQISKKRQEATQVQRKKKLNVPPGKSISSEEFKAALPTEQLLIDDDQDQPSTSTGVKARQCSKTGRPDLKTLQRKGKRRDTDSSSEEENDRFSLQDSEDLETFSDLENPLTPSIPDVQTSDFLQHLKVDDFVLVRYECELYPGRIVHLEDDGEKIDEPEQIGRREIFKVKELQVYSDLLASADKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00152454; iTF_00152455; iTF_00152456; iTF_00152457; iTF_00152489; iTF_00152459; iTF_00152441; iTF_00152490; iTF_00152941; iTF_00152559; iTF_00152433; iTF_00152599; iTF_00152440; iTF_00152553;
- 90% Identity
- -
- 80% Identity
- -