Basic Information

Insect: Aquatica leii
Gene Symbol: -
Assembly: GCA_035610365.1
Location: CM069432.1:27246079-27250906[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.5e-10 9.2e-08 34.3 0.0 3 39 21 57 19 60 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.5e-10	9.2e-08	34.3	0.0	3	39	21	57	19	60	0.90

Sequence Information

Coding Sequence: ATGCCGAGGGtgtataaaaagaaaagtaaagacGATGGGGGACGGGTTAATTACGATAAGGGTGCGATGGACTCAGCGATACACGCTGTGCGAAGTGGaagattaaatcaaaaacaagcaGCTGAAGTGTACGAGGTGCCAAGGTCAACGTTAACCAAAAAACTCAGTGGAAAACTGAATCCAGAAATTACCAAAGGGAGACGTAAAACAGATCTGACACCAGCTAATGAGAAGGAGCTAAAGGAATATTCAAAAGTTCTACGACATTGTGATGACCGGCCAAGTGACGAGTGGTTCCGCAGTTTTATGCAACGACATCCAGACCTATCCAAAAGGAAGGGAGAACAATTATCTATCAAGAGACTCAAAGGAGCTGATCCATTTATTGTCTATAAGTTTTACAATGATCTAGAAGAGTTGTATGAGAAAAGTGGTTACACCAATGATGATGCCCATCTTGTGTACAATTGTGACGAAAGTGGTTTTTGCCATGATCCTAAAGATACATGTGTAGTAGCGGAAAAGGGCACTAAAAGAATGTCGCTCAATATAGGAGGTAGTGGACGAGAAACTACATCAGTTGTAGCAGAAAATACATTCAGTCGACCTGGAACAGTAATAACTGCATCTGATAAAGGATGGATGGAAGGTTCTATTTTTGCTGCATGGTTTAATCGTACCTTTATTAAGGATATTCCAACTCTTCAAGACCGAAATGGAAAAccagtaattttaatatttgatggATGTAGAAGCCACACCCAAGATGCTGTTACGCTGTCAGTTGCAGAAAAATGTATTGAACACAAGATACATCTAGTTAAACTTCCACCAAACCTAACACACGAAATGCAACCGCTTGATAAGACTTGTTTTAGAGCTGTTAAATTAGGATGGAATGACGTAATTTTGTCGTGGCAAAGACAAAATCGATCAAAGCAAACCTTACCAAAAGACGAATTTGTAAAATGTCTTTCAAAGGTATGGGCCAATAATTTCACTTTCGAAAACCTTCGTTCAGGATTTTTGTCTACAGGTCTTTTTCCTGTTGATAAAGAGCTGTTTCCCAAAACAATTTTCTTACCGACTGCTTTGAGAAGATTTGAAAAACACATCGAAGAAGGTCGGTCTTTAGAGAATCCTGGGGACGAAGACGATACTCAAGATTCGCAAGCACCACAACATGATGTTATAGAGCCTGAGGACCAGCCAGTTATTCAAAAATCGCCAGTATCACAGCTTGAAGCATCAGTGTCAAGCATTTCAGACGAGGCCCAGTTGGCTACTATGGGATGTGTCATAAGGAATGTAATTAGCAGGACTGGTATACCACATACTTCTACAAGTGCTAATGTCAGAGATGTTATTGAAACAGCAGACGATTTCAATTTACTCATAAGAGAATCCGTTATTGGAAGAAGTAGAACAGTGGCTATTGAGAAAACAAAGCGAGTCTCCACAGCGTATAGAGAAATTGTTACGATGGAGGAAATAAACGAAAGATTAACTAAGTCAAGCGCCAAAGTCGACAATAACAGCAAAATATGCGTCAAAAAGGACAaagttgtcaaaaaattaacagtGAAAAAAAGAAGCATATGCGAACCTTCAGACAGCGAGaaaaaacgaaagaaacaaGCAATAAAACAGGATTCTTCAGAAACGGAGGATGACGATATTGACGTAGTACTCAATAAGAGTTTCTTAGACCATTGCAAAGCATTGGTGAAAGTATGgAAAGCCAATGAGATTATGAGTTTGGTCTCTATGCGATCCTACTTGATTCAGTTCAATCCATATCAGGATTCGTTGGCTGTTCCAACAAAATGGGTGGAAAATAAAAGCGCTATCGAGGATTGGTTTTGGGGCTTCATGGGCCGACATCCAAGGCTGTCTATGAGAAAGCCAGAGGCCACAAGCCTCGCTAGAATGACAAGCTTTAATAAGACAACTGTCAGAGAGTTCCAAGATAAGCTGCAAGTCGTCATTTCACGACATTCTTTCACACCtgagataatttttaatttggacGAGACTGGAGTTACTACCGTCCAACGAGTGCAGAAAATTGTAGGTAAAAAAAGTGAACACCAAATAGCCCAGGTTACATCAAGAGAAAGAGGTGAGCTAATCACTCAGGTAGGAATTATTTGTGCTAATGGTAGTACTATTCCACTTGTATGGATTTTTCCTCGACATCGATTCGACCCTAGCAGAATGATGAAAGGCATAAAAGATAAAGATCCATTAGATTTAGTTTATCCCAGCGGCTGGATGACCTGTGAAAACTTTATCAAAGTTCTAGAACACTTTGTTACACACGTTCGATGTTCTCTAGAAAAAAAAGTGCTGTTGATTATGGATAATCATGAATCGCATTTATCTCTAGATACAGTTGACTTTTGTAGAGCGAAtggaattataattttaactcTTCCACCGCATACTTCAAATAAACTGCAGCAGCCATTAGACCTCACCGTGTTCGGCcctttcaagatttttttcaaCCGAGCGGCTGACTCTTGGATGATTCCGCATCCTGGAgaaactataaatatttatgatCTTCCACTTATGTGCCAGGATTTCCCATCTTCTGCTGTTATAGATCGCTCGTTGCCAGTTAATGAAGATCTTGAAAACATATCTCCTGCAGTTGCAGGTATTCCTCAATGCCATAATAAGTCACCAAAAGAACGGCGAAATACGTATAATCTCGATCAACCATCTACGTCTGTAACATCAATTTCGAAAAAAAACGCCACCACCGATCTAACTTTAAGAAAAGTAGAAGAGGAAATATTTATATCACAGGAGGAGATTAAACCGTTTCCAAAGGCCGCtccaagaaaacaaaatagcaaTCGAGGAAGAAAACGAGGGCGATGTATGATCGCCACAGATACCCCAGAGAAGCTGATACTTGAAGAAAAGAAGAGACTAAAAGAAAGTAGGATGTctgagaagaaaagaaaagaagtcAAGAAGAAAGTATTTCAAGAAGAATCCACAGATGATGAAGGTGAAGAAATTGTTTTGAATGACAACTCATCAGATGATGATGCATGTCATGTCTCTGATGAAGAAACGTCAGTCGAATGTGTTCCTAAAGGTGGATACATTATTGCAAAAGTTTTTGGAAAATCGTCTGTCAGAAAATATGTCGCTGTTATTGACGAAAAACATTTTGACGGTTATGATGTTCGTTTTTTGAATGAATGGCCAGCAGTTGTTATGTTTAATGAAGTCGTAATGGTTTTTCCTGATGCCATCAAAGAATCTAGACCAAGATTTAAGGATATGGTCTACTTTAACATAGATCTGACTGAAGTTTTATTAGTGTAG
Protein Sequence: MPRVYKKKSKDDGGRVNYDKGAMDSAIHAVRSGRLNQKQAAEVYEVPRSTLTKKLSGKLNPEITKGRRKTDLTPANEKELKEYSKVLRHCDDRPSDEWFRSFMQRHPDLSKRKGEQLSIKRLKGADPFIVYKFYNDLEELYEKSGYTNDDAHLVYNCDESGFCHDPKDTCVVAEKGTKRMSLNIGGSGRETTSVVAENTFSRPGTVITASDKGWMEGSIFAAWFNRTFIKDIPTLQDRNGKPVILIFDGCRSHTQDAVTLSVAEKCIEHKIHLVKLPPNLTHEMQPLDKTCFRAVKLGWNDVILSWQRQNRSKQTLPKDEFVKCLSKVWANNFTFENLRSGFLSTGLFPVDKELFPKTIFLPTALRRFEKHIEEGRSLENPGDEDDTQDSQAPQHDVIEPEDQPVIQKSPVSQLEASVSSISDEAQLATMGCVIRNVISRTGIPHTSTSANVRDVIETADDFNLLIRESVIGRSRTVAIEKTKRVSTAYREIVTMEEINERLTKSSAKVDNNSKICVKKDKVVKKLTVKKRSICEPSDSEKKRKKQAIKQDSSETEDDDIDVVLNKSFLDHCKALVKVWKANEIMSLVSMRSYLIQFNPYQDSLAVPTKWVENKSAIEDWFWGFMGRHPRLSMRKPEATSLARMTSFNKTTVREFQDKLQVVISRHSFTPEIIFNLDETGVTTVQRVQKIVGKKSEHQIAQVTSRERGELITQVGIICANGSTIPLVWIFPRHRFDPSRMMKGIKDKDPLDLVYPSGWMTCENFIKVLEHFVTHVRCSLEKKVLLIMDNHESHLSLDTVDFCRANGIIILTLPPHTSNKLQQPLDLTVFGPFKIFFNRAADSWMIPHPGETINIYDLPLMCQDFPSSAVIDRSLPVNEDLENISPAVAGIPQCHNKSPKERRNTYNLDQPSTSVTSISKKNATTDLTLRKVEEEIFISQEEIKPFPKAAPRKQNSNRGRKRGRCMIATDTPEKLILEEKKRLKESRMSEKKRKEVKKKVFQEESTDDEGEEIVLNDNSSDDDACHVSDEETSVECVPKGGYIIAKVFGKSSVRKYVAVIDEKHFDGYDVRFLNEWPAVVMFNEVVMVFPDAIKESRPRFKDMVYFNIDLTEVLLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -