Alei094381.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- -
- Assembly
- GCA_035610365.1
- Location
- CM069437.1:65985428-65987123[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-12 1.1e-10 43.7 0.5 5 40 22 57 19 61 0.94
Sequence Information
- Coding Sequence
- ATGCctcgaaaatatataaaaaaattaggaccCACAAGAAAATTTCAGTATGATCCAGTTTATATGGAACGAGCAGTGGCTGCTGTTGCAAATGGTCGTATGTCTATAAGAAGAGCTTCTGAGATGTATGCAGTCCCTTACACCACCTTGCAGCGGAGATATCGCGCAAACAGAGAGTCCAGAAAAATTGGGGGACAACCAGTCCTTTTTGACCTCGAGGAAAGGAAGCTGGTGGTATGTTTGTTAGTATGTGCTGATTGGGGATTTCCTCTACAAAGTATTGACATTCGGTATATGGTACAGCAATATCTAAACAGAGcaggaaaaactgaaaaaagatTCAAAGACAACATGCCAGGCACAGATTGGTTCAAAACATTCATGGAGCGACACAAGGATCTTACAGTAAAATTAGCTAAAAATACGAAAAGAGTTAGGGCTGCCGTCTCCTACGAAACAGTTGAACAGTATTTTCGGCATCTTGGAGAGTCTCTGGAAGGTGTTCCACCATCAAATGTCATTAATTATGAGGAGACCAATTTTACAGACGACCCAGGAGCTGTAAAAGTCGTCGTAAGAAGGGGATCTAAACACGCTCATCGAGTTATCGATACATCGAAAACCAGTACAAGCGTCATGTTTTTGGTTGCTGGTGATGGAACACTCCTGTCGCCTTACATTGTATATAGGGCAAAACATATGTACGAAGGGTGGGCAGAAGGGGGTTTTCCAGGTGCACGGTACAACAGATCGGTGAATGGCTGGTTTGACAAAGGCTCAAAGGTCATGATAGGAGACAATTTATGTAGCCACCTTACAATTAACGTCATTGATCAGTGCGAACAAAATAACATACGATTCATACTTTTACCGCCGAATTCTACAGATTTACTGCAACCCCTTGATGTTGCCTATTTTCGACCCCTAAAGCGTGCTTGGCGCAATGTTCTCACAAAGTGGAAGATCAAACACAGAGGTGttcttccaaaaaccgtttTTCCTGCATTGGTAAAAGAAGCAATAGAAGAAGTGGGACTGCAATCGGCCTTAAACACCAAATCAGGTTTTAAAGCGTGTGGCATTGTGCCATTTAATCCCGATCATACCCTCAAAAAGATTGAACACTTGAAAAACAGAGAAGACAATAATGAAGAGAACGAGGAAGCAAGAGTAGAGCAAAGATGGGCGAACACCATTGTTGATCATTTAAGAGAACTAAGAACGGTCTCGGGCGAAAATCCAAAGAGGGGAAAAAGAGTTAACGTCATAGCAGGAAAAAGTGTTTGTACGAAAGACCttcaagaagaaaaagaaagctcCGAAGAGGAGGAAGATGGCATTGATGCGAGTTTGTCAGACGTGCAAGATGACGACGTTTCAGAAGACTTACTACCTGTGAGCATTGATGAACATTTTCAGCTTGGAGACTTTGTTATTGTGAAATTTGTCACGAACAAAAGAGATCGATTTTTTGCTgctaaaattgaagaaattttagGTGAAGAGGCTGCAGTTAAATGTTTAAGGAAGAAGtcgtcaaaaaaagaaataacttttGCCTATCCCGAAATTGACGATAGTGGTCAAGCAAgagcaaattataaaaaaaattcatgcaatcCCCCTAAGAAAAGGAACATTTACTTTTAA
- Protein Sequence
- MPRKYIKKLGPTRKFQYDPVYMERAVAAVANGRMSIRRASEMYAVPYTTLQRRYRANRESRKIGGQPVLFDLEERKLVVCLLVCADWGFPLQSIDIRYMVQQYLNRAGKTEKRFKDNMPGTDWFKTFMERHKDLTVKLAKNTKRVRAAVSYETVEQYFRHLGESLEGVPPSNVINYEETNFTDDPGAVKVVVRRGSKHAHRVIDTSKTSTSVMFLVAGDGTLLSPYIVYRAKHMYEGWAEGGFPGARYNRSVNGWFDKGSKVMIGDNLCSHLTINVIDQCEQNNIRFILLPPNSTDLLQPLDVAYFRPLKRAWRNVLTKWKIKHRGVLPKTVFPALVKEAIEEVGLQSALNTKSGFKACGIVPFNPDHTLKKIEHLKNREDNNEENEEARVEQRWANTIVDHLRELRTVSGENPKRGKRVNVIAGKSVCTKDLQEEKESSEEEEDGIDASLSDVQDDDVSEDLLPVSIDEHFQLGDFVIVKFVTNKRDRFFAAKIEEILGEEAAVKCLRKKSSKKEITFAYPEIDDSGQARANYKKNSCNPPKKRNIYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00152386; iTF_00152200; iTF_00152214; iTF_00152201; iTF_00152204; iTF_00152205; iTF_00152210; iTF_00152212; iTF_00152211; iTF_00152408; iTF_00152216; iTF_00152249; iTF_00152283; iTF_00152178; iTF_00152274; iTF_00152244; iTF_00152378; iTF_00152194; iTF_00152330; iTF_00152177; iTF_00152945; iTF_00152186; iTF_00152191;
- 90% Identity
- iTF_00152274;
- 80% Identity
- -