Alei088986.2
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- lov
- Assembly
- GCA_035610365.1
- Location
- CM069437.1:13117029-13121455[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-17 5.2e-15 57.5 0.0 1 44 65 108 65 109 0.96
Sequence Information
- Coding Sequence
- ATGTATCGTTATGTTTTTGGACTAGATTCTCCTCTTGGTTTATTTCCACCCGGTTTGGACGGTTGTCGAAATCCACTTTTGGAAATGGCCGATCCGAGGAACACGCCGGATTCGCAATTGTTtgcaaaaaagaaaaTGGGAAGGCCAAAAGGTCAACATTCGGCGCCTCGAGGAGGACCGCCGCGATCTTGGACAAACGCCGAACTAACAGAAGCGCTACAGCACGTATGGAACAAGAAAATGACGACGAGTCAAGCTTCTAGAATATTCGGTATACCTTACAATTCGTTATTAATGTACGTACGCGGCAAATACGGAAAGAGCCTAAAATTAGAACAACTAAGAAAAGACTGTATAAGTGGTCCGGGTGCTCCCGATTTCTTAGGTTTGggtaacaacaacaacaactcGAGTAAATCAGATCCACGCGACAGCGAACCCATACAACCGAACACGAGGCCATCGAGCAGCGACGAACAGCCGCCGCAACCGCCCGTGTTTAACCCGTTCGCGCCGAATTTTTATCCGGATTTCGGCGCCGGATTTCCGATACCAGTAAGCATGATACATTTACTACCGCAAAGCGAGAAGAATCGGGAGCAGTACGAGCAGCCGCTTCTTCTCGAAGAAGACACGAAAGATAGGATAAAAAAGATGGTCGACGACGAGCCTCAAGATTTATTCAAAGCGCCGACGCTTTCTCGCGACGACCGACGCGAGCTTGTACAACAAAACGGTCAGGATTAA
- Protein Sequence
- MYRYVFGLDSPLGLFPPGLDGCRNPLLEMADPRNTPDSQLFAKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPGAPDFLGLGNNNNNSSKSDPRDSEPIQPNTRPSSSDEQPPQPPVFNPFAPNFYPDFGAGFPIPVSMIHLLPQSEKNREQYEQPLLLEEDTKDRIKKMVDDEPQDLFKAPTLSRDDRRELVQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01400278;
- 90% Identity
- iTF_00838320; iTF_00001845;
- 80% Identity
- -