Alei068613.2
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- bab2
- Assembly
- GCA_035610365.1
- Location
- CM069435.1:33860319-33866046[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-10 2.6e-08 36.1 0.0 1 39 369 408 369 412 0.90 2 4 2.1e-11 2.3e-09 39.5 0.1 1 39 423 461 423 465 0.95 3 4 1.2e-15 1.3e-13 53.1 0.0 1 45 478 523 478 523 0.97 4 4 7.2e-15 7.9e-13 50.6 0.0 1 40 530 570 530 574 0.92
Sequence Information
- Coding Sequence
- ATGTCTGGACAACATTACTGCCTAAGGTGGAACAATTACCAAAGCAATATGACTTCAGTTTTCCACCAGCTTCTTCAAAACGAAGCGTTCGTGGACGTTACGTTAGCTTGTAAGGATTTATCTCTTAAAGCTCACAAAGTGGTGCTTTCTGCGTGTTCCTCATATTTCCAAAAGCTATTATTAGAAAATCCTTGTAAACATCCCACGATAATTATGCCACAAGATGTATGTTACGCCGATCTCAAATTCATCATTGAATTCGTATACAAAGGAGAAATCGACGTTTCTCAAGCAGAGTTACAGTCGCTTTTAAAGACAGCCGACCAATTGAAAATAAAAGGTCTCTGCGAGTCTGAAGATAAGGAAAATTCGTCGTCACCGCAATTGATGCCAAGGGGGTTTCCAAAAATTTCTAAGGTATCTTCACAGTACAGAAATTTAGATAGTAACAAGAGGCGTAAAATTCAAGAATTTGATGCAAGTGATTTCTCCGATAGGGACGATGATGCTAAAGAATCTCTTATAGAAGATCATATTTCCGATTATGATAGTGATGTACCGTTAGTTGTTGATGAGGGaccaaagagaaaaaaagtagCTCATTCTACACCTGTTAACATGAGCAGTCATGGCCTTTTGGCTGGACAGGCTCTGTTCTCCCAGTTATGCGATAACGATGACTTTCCGCCTGAGCCGCCGGCTCCTAGTGCAACGCCAGTGGGTCACGTTGACTTACAAGAACATTCACCTACACGAACATTGTTGCAATCATCACATAGGACAGACCTGTCAGACGTGCATATAAAATATGAGGAAATCAAAAAGGAAACTATCGTTAAATTTGAAACTTTACGATCGTACGATCATGATTCTATGATGGATATGGACGGAACGCACATGTCCGGACCGGATCACTCTATGGAAAGTCATGAGGATGCTGAAAGAGCTATGCATTCTATGATGGTTACACCGGAATTAATGGGTATAATACCAGGTGGTTCGGGTAGTTTAGATCCGTCTAACGGGGATAACGGTCACCATAAAAGTAATGGGCATTCGGATCTCTTAACTGCACGATCGCACGGAGGAGGACCTAAAACGTGGACCCAAGAAGACATGGAGTTAGCGTTAGATGCCTTAAGAAATCACAATATGAGTCTGACTAAAGCTTCTGCTACATACGGAATTCCCTCTACAACGTTATGGCAAAGAGCACATAGATTAGGTATAGATACGCCAAAAAAAGAAGGACCTACTAAATCATGgactgaagaaaatttaaattcggCGTTAGAAGCATTAAGAACGGGCACAATTTCCGCGAATAAAGCTAGCAAGGCCTATGgaaTACCTAGTAGTACCCTGTATAAAATAGCTAGAAGGGAAGGTATCAAATTGGCCGCGCCATTTAATGCAGCACCTACGACATGGTCACCAGAAGACTTAGAAAAAGCATTAGAATCAATTAGATCTGGTCAATCATCGGTTCAAAAGGCTTCTACGGAGTTTGGAATTCCTACAGGAACGTTATACGGTAGATGTAAAAGAGAAGGGATAGAATTATCCAGATCGAATCCAACGCCTTGGTCAGAAGACGCTATGGGTGAAGCGTTAGAAGCTGTTAGGCTGGGTCACATGTCAATCAACCAAGCGGCAATTCATTATAACCTTCCTTACTCGTCTCTTTACGGAAGGTTTAAACGTGGAATAAAATACGAAACAGAAGCAATAGACTCAAATAATTCAGATAGTCAATCTCAACCAGACTCACACATACTTGTGATGGATTATCCAAATTCTCACCAACAAATTCAGTATCAACATCATGCAAATAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACKDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCESEDKENSSSPQLMPRGFPKISKVSSQYRNLDSNKRRKIQEFDASDFSDRDDDAKESLIEDHISDYDSDVPLVVDEGPKRKKVAHSTPVNMSSHGLLAGQALFSQLCDNDDFPPEPPAPSATPVGHVDLQEHSPTRTLLQSSHRTDLSDVHIKYEEIKKETIVKFETLRSYDHDSMMDMDGTHMSGPDHSMESHEDAERAMHSMMVTPELMGIIPGGSGSLDPSNGDNGHHKSNGHSDLLTARSHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWSPEDLEKALESIRSGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYETEAIDSNNSDSQSQPDSHILVMDYPNSHQQIQYQHHANS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00003877;
- 90% Identity
- iTF_00151822;
- 80% Identity
- iTF_00153623;