Alat001364.1
Basic Information
- Insect
- Aquatica lateralis
- Gene Symbol
- -
- Assembly
- None
- Location
- Alat1.3:1395893-1401860[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.06 2.8 6.8 0.0 3 23 317 338 316 338 0.92 2 17 8e-05 0.0038 15.8 0.1 1 23 391 414 391 414 0.95 3 17 8 3.8e+02 0.1 0.2 1 23 452 474 452 474 0.70 4 17 1.8 84 2.2 1.0 2 23 508 531 507 531 0.88 5 17 0.00022 0.01 14.4 4.6 1 23 534 557 534 557 0.96 6 17 0.0066 0.31 9.8 2.1 2 23 564 586 563 586 0.95 7 17 0.0021 0.1 11.3 4.8 1 21 710 730 710 731 0.95 8 17 0.00023 0.011 14.4 2.2 2 23 743 765 742 765 0.94 9 17 0.042 2 7.2 0.7 1 23 768 791 768 791 0.95 10 17 4.7 2.3e+02 0.8 5.8 3 23 794 817 793 817 0.93 11 17 1.8 84 2.2 0.2 1 23 821 844 821 844 0.93 12 17 1.5 69 2.4 1.4 2 23 851 873 850 873 0.91 13 17 0.044 2.1 7.2 0.9 2 23 882 904 881 904 0.94 14 17 0.051 2.4 7.0 0.2 3 23 911 932 910 932 0.93 15 17 1.5 70 2.4 1.0 3 23 1081 1102 1080 1102 0.94 16 17 7.1 3.4e+02 0.2 0.1 2 19 1109 1126 1108 1127 0.60 17 17 0.091 4.3 6.2 0.8 1 23 1144 1166 1144 1166 0.96
Sequence Information
- Coding Sequence
- ATGAATATGGATACGAAATTGTGTAGAATATGTGGAAAACTAAGTGAGAATTACGTACATATTTTTAAAACTGAAGGCTTGAAGAATAAAATCGAGACATGCTTGCCTATAATAGTATCACCACATTGTTTATTACCCGACACGATATGCTCCGAGTGTTTAGAAAACGTCGACAATTTCTACAGCTTTATAAAAAATTGTTTACAAAATATCATTGTACTCGAAGCACAATACGACATAATGGAATCATGTCTAAAAACAAAACGAAAACACGAAAAAGGTTCTTTGGTTGACTTCTCATCGGTCAGGTACGATAAAAATGTACAAACTGATGAAGACTTCGCCGATCTACTCCTTCAGAGAGAAGAAAGTCGTCGTAACACCCTTCATTTCAACTACATTGAAATGGAGAAACTTAGCGCAGCTTTACTTAACGCCGAAAATATCTTAAACGGCAAGGAACCTGATGCATTAATACCCGTTCATGTAAATTTTAGACCAATTGCATCTGTTTCGAAAGCACTTGTTAGTTACGATATTGAAACTGATGGCGAATCTGACGAGGAGAGTCGCAACAATGGTCGCGTCATCCTTGTACCAAGGAATAAAAAACATATTGGGTCGTCGTGTCGTAACCAAACTCATAAGAAATATTTTGACGATGTCGAAATCGATTTAATTAACGAGATTGCTCAACGTAAGTCATTGAAGCGGAAGTGTGATATGGTGATGATGGATTCGTCAAAGATGTTTAAGTTGGATTCGGGGAATCGAAGGAAAAATCGACAGCCTAAGAAGTTGGAACCCGTCAAGGATTGTGAACTTCCGAATTTAACATTTAATAGTTTAGAGAGTTTTTATCAAGTTATGAATGACGATCGTGCGGAGGAGGAAAAACCAATTGTGCCACAGGCGGAGAAGGAGGAAACCTACTCCTTGCCTCAGCTATGTTTACTATGCGATCTGCAATTTTCGGGTCCGACAACACTGGCCGCTCACATTTATGAAATGCACGGTATTGATATGGCGCAAGTAATTTCTTCCGAACCCGTCATGGAGCGTAAAAAGAAGCTGCCCAATTTGGTTAAAATCACCGATTTAAAAATCAAAAGCGACAGTGACACTTCGAACAACCCAGTAATGGAGAGTCCACCAACGTTACGTCCGACGTTCGTATGTCCAATCTGCCCGGCCGTGTTAACCAATCGGTCGGATCTCTTCTCGCATCTAAAAGCCAAACATTCAAGACACGCGTCGCTTCTGTGCGGGCTTTGCATGCACGTGGCCAATTCGTTCACGAATCTCACCGTGCATTTGGACACCTGCAAGCAGCAACACAACATTACGACCAAATATATCTGCAAAATTTGCTCGTACTACGACGACAACTCAAAAGTTATGGAGAATCACATAGCCGTGCACGATTTTATCTTGGAGTTTTGTAAAAAGCAGTCAAAAATGTTCGATCCGTGCGATTACGTCGAAATCAACAAGAATTCGGAAAGCGCGAACAAATCTCTGACTTGCACCGAATGCAACCAGGGCGGCTTCGTAACTTTCAAAGAATTCAGCACGCATCGTCGTAGCCAACACCAAATCTTCCACTGCGACCTTTGCAATAAATTCTACGGCCGAAACTCGCACCTGTGGAAGCACGTCAACAGACTGCACAAGGGTCACCCGAGCATCACGTGTCAACTTTGTTATAAAACCAGTGCCTCCAAGTATCACTTGGCCCAACACTTTAATAAAATCCACAGCGCAAAGCCTTTGAAACAAAAACAGGAAACTCCCCCGAAAGACGATACTGATTTCATGAAGCAAAAATTCCAAGGTTTTGATTTTCAATCAGTGAGACAAAGTTTCATGAGGCAGGAATTGTTAGAGCAGGACGCTAATTCCGAAGGAGAAATCGAATCAGATATTAAGGTTGAAATTAAAAACGAGTACGATTGTTCCGATTTGGAGTTATACGTGAACGATCCGGAGGATTTTGATATTAAAATACCGAGTAGCGAACCGAAACCGCAACAGAGTTTGGTGTCACCGCCAAAAGAAATCGACTCGTCGAGCGATTTGTACACGAATATTATTACCAATTACACACCGCCACAGAACGAGGGCGAGTATAAGTGCCCGAAGTGTTTTAAGGGCTTTCACAAGAAGACGTTGTTGAAGAAACATAAGAAGAATTGCAGGCCTAGGTTGCAAAAGGATTTGTTGACGCGGTGCAAGACTTGTTCGAGGATCTTTAAAGACAGGCAAAGTCTCACTAAGCATTTAATAAATTACCATTCGGAGTATGCGTGTGAAATATGCGGACAGAAGGTGCAGAGCAAGTGCGAAATAGTCTCGCATATACGGTTTTCGCACCCGAATTGTCATTTGTTCTGTCACTGCGGGAATATCTTACGTAGCAAGACTGACTTGACTGAGCATAAACAAGATCACAGGAATTCATTCGTGTGCCAGTTCTGCGCCGATATGTTACCAACGAAAATTAAATTGAAGATGCATATTTTAAGTCTGCATAGGAAAATTTTAAGCTTGAGTTGTGGTATTTGTTTGAAACTATTCGAGACGCAGCATATCTTACGGGACCACGTTTGTCTTGTACATAAGGACCAGTTACTGCCGCTGACCTCGTGCACGGTCTGTGGCAAGAATTACGGTTCGAAGTGGAAGACTTACGACCACCTTAATAAATCTCACGGGCGTATATTTAAAGCTTGTAAATCCTGCTTGGAGGTTTTTGATACAGAGGAGGAGTTACAGCAGCATTTTGAGAGTCAGCATGTTAATAGCACGCAAGCAAAGGTGGTTGCGGTTAAGGCGGTGCCGAGTTCCGAAGAGAACGGGGATAAGAATTCTTCCAGTGAGGCTTCGAACGATTCTTTTGTTAAAACTAATGGTAGCGAGGATGAAGATGTTGGGAAGGCTACAGAAACACCCGATTTAACTTCAGTTGAAAATAAAATATCGTTGTTGGAGAAGCGGTTAATGGGCAATAAGAAAAGTTTAGACGGCGAGACCAGCATCGCTAACTCGATTTTGTCGAGTATAACGAAGAGTAAATTAAACTCGATTAAGCAGTTAGGCGATAGTCGGAAGGATAAGAAGTGCTCGAAGGGTTCCGAAGGTAGGAAAGAACCGAACGACGAGCTCGATTCCAGCTTGCAGAATACGTCACAGAATAGTTCGAAGCGTACTGTGTACGTAAATAGTAACGATCCGTCTTTTTGCGAAATTTGTTTGAAGACGTGGCCGGCTAAGAAGCATTTGTGGCAGCATTATATCCGTCGGCACAAAACCGTAGCGGCGACTGTCTGCGGTATTTGCTTGAAAACTAACGACAGCTATAAGGCGCTTCAGACACATCTATGGGAGAATCATCCGAAGTTATTGCACGGTCAAGGTTTTGGCTCGAATTTTATTTGTCGGATTTGTGGTAGGTACCATAACGCAAGTTCTAAGTTGAGATTACACATGGCGATTCACGAAAACTTCGATTGGTCTATTTTAGATGAGTTAGAATTGCAAAAGACCACGTCGGATGCGATCGCATCGAAGAAGGAATCTCAGACTAGTAACGGGTACTTGGAGACGAGTGCGAACGATAATCGGAGTATTAACTACGAAAGCCTTATCGAACAAGTCGAGTGTTCGTCGAACTCTGACGAATCCGATTTGGACGATGTCAAGGACGCCGAAAAGTATTCGACTAATAATGTGAACTCCTCGTCGGACGAAGATAGTGATAGTGAATCGGTAATTTCGGCGACCGAAGGCAACTCGTTAGAAAGTCAAATGCTGCACAACATGCTACGCGAGAAATTCGTAACCGATGTCAAAGTCGAGCCGGCTGAAATTACCGCCGATAAGTTACAATACTCGAGCACCGATAGCGAAGAAAGCAGCGACTCAAACGACACCGCTTCAGAAACCGAACCCGAAGCCGTTAATATAAAAACGACCACCGACGATGAAAGTTCCCAATTCTCGCGCACGTCGAAAGACTCCGAACAAAAATACGAAGGTACGAACATGTTCTCGAGAAAGTCGGACGAATTAGATTCGGCTATACGTTCGATTAGCTACGAGGAGATTAACGAAGTGCGCGAAGCAATCCCGTTGGATATATGCGACGTACACCCGCAGATTCTAAACCAGCACGAGATTCAATCGGCCGTCGATAGTATATTATAA
- Protein Sequence
- MNMDTKLCRICGKLSENYVHIFKTEGLKNKIETCLPIIVSPHCLLPDTICSECLENVDNFYSFIKNCLQNIIVLEAQYDIMESCLKTKRKHEKGSLVDFSSVRYDKNVQTDEDFADLLLQREESRRNTLHFNYIEMEKLSAALLNAENILNGKEPDALIPVHVNFRPIASVSKALVSYDIETDGESDEESRNNGRVILVPRNKKHIGSSCRNQTHKKYFDDVEIDLINEIAQRKSLKRKCDMVMMDSSKMFKLDSGNRRKNRQPKKLEPVKDCELPNLTFNSLESFYQVMNDDRAEEEKPIVPQAEKEETYSLPQLCLLCDLQFSGPTTLAAHIYEMHGIDMAQVISSEPVMERKKKLPNLVKITDLKIKSDSDTSNNPVMESPPTLRPTFVCPICPAVLTNRSDLFSHLKAKHSRHASLLCGLCMHVANSFTNLTVHLDTCKQQHNITTKYICKICSYYDDNSKVMENHIAVHDFILEFCKKQSKMFDPCDYVEINKNSESANKSLTCTECNQGGFVTFKEFSTHRRSQHQIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLAQHFNKIHSAKPLKQKQETPPKDDTDFMKQKFQGFDFQSVRQSFMRQELLEQDANSEGEIESDIKVEIKNEYDCSDLELYVNDPEDFDIKIPSSEPKPQQSLVSPPKEIDSSSDLYTNIITNYTPPQNEGEYKCPKCFKGFHKKTLLKKHKKNCRPRLQKDLLTRCKTCSRIFKDRQSLTKHLINYHSEYACEICGQKVQSKCEIVSHIRFSHPNCHLFCHCGNILRSKTDLTEHKQDHRNSFVCQFCADMLPTKIKLKMHILSLHRKILSLSCGICLKLFETQHILRDHVCLVHKDQLLPLTSCTVCGKNYGSKWKTYDHLNKSHGRIFKACKSCLEVFDTEEELQQHFESQHVNSTQAKVVAVKAVPSSEENGDKNSSSEASNDSFVKTNGSEDEDVGKATETPDLTSVENKISLLEKRLMGNKKSLDGETSIANSILSSITKSKLNSIKQLGDSRKDKKCSKGSEGRKEPNDELDSSLQNTSQNSSKRTVYVNSNDPSFCEICLKTWPAKKHLWQHYIRRHKTVAATVCGICLKTNDSYKALQTHLWENHPKLLHGQGFGSNFICRICGRYHNASSKLRLHMAIHENFDWSILDELELQKTTSDAIASKKESQTSNGYLETSANDNRSINYESLIEQVECSSNSDESDLDDVKDAEKYSTNNVNSSSDEDSDSESVISATEGNSLESQMLHNMLREKFVTDVKVEPAEITADKLQYSSTDSEESSDSNDTASETEPEAVNIKTTTDDESSQFSRTSKDSEQKYEGTNMFSRKSDELDSAIRSISYEEINEVREAIPLDICDVHPQILNQHEIQSAVDSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154144;
- 90% Identity
- iTF_00154144;
- 80% Identity
- -